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Q74KR5

- SYR_LACJO

UniProt

Q74KR5 - SYR_LACJO

Protein

Arginine--tRNA ligase

Gene

argS

Organism
Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
    2. ATP binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciLJOH257314:GJN3-543-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
    Alternative name(s):
    Arginyl-tRNA synthetaseUniRule annotation
    Short name:
    ArgRSUniRule annotation
    Gene namesi
    Name:argSUniRule annotation
    Ordered Locus Names:LJ_0686
    OrganismiLactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)
    Taxonomic identifieri257314 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
    ProteomesiUP000000581: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 558558Arginine--tRNA ligasePRO_0000242035Add
    BLAST

    Proteomic databases

    PRIDEiQ74KR5.

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi257314.LJ0686.

    Structurei

    3D structure databases

    ProteinModelPortaliQ74KR5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi119 – 12911"HIGH" regionAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0018.
    KOiK01887.
    OMAiELGDMQA.
    OrthoDBiEOG6JB13C.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPiMF_00123. Arg_tRNA_synth.
    InterProiIPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PANTHERiPTHR11956. PTHR11956. 1 hit.
    PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view]
    PRINTSiPR01038. TRNASYNTHARG.
    SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsiTIGR00456. argS. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q74KR5-1 [UniParc]FASTAAdd to Basket

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    MDFKQKVVDL VSEQVDLPKE KISMLIERPK NPKMGDYAFP AFALAKIEHK    50
    NPALIAKDIA EKISDDNFTS IQAVGPYVNF AIDHAKLVNA TLNDVLTEKE 100
    HFGDQKLGEG NVPIDMSSPN IAKPMSMGHL RSTVIGNSIA KTLEKVGYTP 150
    IKINYLGDYG TQFGKLITAY RLWGNEGDVK KDPITNLFHY YVKFHEEAEK 200
    DPKLEDEGRA AFKKLENGDE EEIKLWKWFR EVSLQEFNRI YKELGVTFDS 250
    YNGEAFFNDK MQPVVDELRE KGLLEESRGA QVVNLGEDEN PALILKSDGS 300
    SLYMTRDLAA ALYRKKEYDF VMSLYVAGGE QTGHFKQLKQ VLKKMGYDWS 350
    DNIHHIPFGL ITQGGKKLST RKGNVVFLDQ VLKDAVSLAE QQIEEKNPNL 400
    SNKKQVAHDV GVGAVVFHDL KNDRMDNFDF DLEEVVRFEG DTGPYVQYTN 450
    ARAQSILRKA NKEISMDNLS LNDDWSFAVA KALADFPAIV EKASEKFEPS 500
    IIAKYALDLS KKFNKYYANV RILDEDNQLN ARLALVQATS IVLTEALRLL 550
    GVNAPKEM 558
    Length:558
    Mass (Da):63,028
    Last modified:July 5, 2004 - v1
    Checksum:iE780DC71AA356BE4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017198 Genomic DNA. Translation: AAS08504.1.
    RefSeqiNP_964538.1. NC_005362.1.
    WP_011161634.1. NC_005362.1.

    Genome annotation databases

    EnsemblBacteriaiAAS08504; AAS08504; LJ_0686.
    GeneIDi2742414.
    KEGGiljo:LJ0686.
    PATRICi22237714. VBILacJoh1832_0539.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017198 Genomic DNA. Translation: AAS08504.1 .
    RefSeqi NP_964538.1. NC_005362.1.
    WP_011161634.1. NC_005362.1.

    3D structure databases

    ProteinModelPortali Q74KR5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257314.LJ0686.

    Proteomic databases

    PRIDEi Q74KR5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS08504 ; AAS08504 ; LJ_0686 .
    GeneIDi 2742414.
    KEGGi ljo:LJ0686.
    PATRICi 22237714. VBILacJoh1832_0539.

    Phylogenomic databases

    eggNOGi COG0018.
    KOi K01887.
    OMAi ELGDMQA.
    OrthoDBi EOG6JB13C.

    Enzyme and pathway databases

    BioCyci LJOH257314:GJN3-543-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPi MF_00123. Arg_tRNA_synth.
    InterProi IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    PANTHERi PTHR11956. PTHR11956. 1 hit.
    Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view ]
    PRINTSi PR01038. TRNASYNTHARG.
    SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsi TIGR00456. argS. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CNCM I-1225 / La1 / NCC 533.

    Entry informationi

    Entry nameiSYR_LACJO
    AccessioniPrimary (citable) accession number: Q74KR5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 27, 2006
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3