Q74GV9 (Q74GV9_GEOSL) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 48.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Delta-aminolevulinic acid dehydratase RuleBase RU000515 EC=4.2.1.24 RuleBase RU000515 | ||||
| Gene names |
| ||||
| Organism | Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) | ||||
| Taxonomic identifier | 243231 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter |
Protein attributes
| Sequence length | 325 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | 2 5-aminolevulinate = porphobilinogen + 2 H2O. RuleBase RU000515 |
| Subunit structure | Homooctamer By similarity. RuleBase RU000515 PIRSR PIRSR001415-3 |
| Sequence similarities | Belongs to the ALADH family. RuleBase RU004161 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Porphyrin biosynthesis RuleBase RU000515 |
| Ligand | Magnesium PIRSR PIRSR001415-5 Metal-binding PIRSR PIRSR001415-3 Zinc PIRSR PIRSR001415-3 |
| Molecular function | Lyase RuleBase RU000515 EMBL AAR33470.1 |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | porphyrin-containing compound biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW porphobilinogen synthase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Active site | 195 | 1 | Schiff-base intermediate with substrate By similarity PIRSR PIRSR001415-1 | ||||||
| Active site | 248 | 1 | Schiff-base intermediate with substrate By similarity PIRSR PIRSR001415-1 | ||||||
| Metal binding | 120 | 1 | Zinc; catalytic By similarity PIRSR PIRSR001415-3 | ||||||
| Metal binding | 122 | 1 | Zinc; catalytic By similarity PIRSR PIRSR001415-3 | ||||||
| Metal binding | 130 | 1 | Zinc; catalytic By similarity PIRSR PIRSR001415-3 | ||||||
| Metal binding | 233 | 1 | Magnesium By similarity PIRSR PIRSR001415-5 | ||||||
| Binding site | 205 | 1 | Substrate 1 By similarity PIRSR PIRSR001415-2 | ||||||
| Binding site | 217 | 1 | Substrate 1 By similarity PIRSR PIRSR001415-2 | ||||||
| Binding site | 274 | 1 | Substrate 2 By similarity PIRSR PIRSR001415-2 | ||||||
| Binding site | 313 | 1 | Substrate 2 By similarity PIRSR PIRSR001415-2 | ||||||
Sequences
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References
| [1] | "Genome of Geobacter sulfurreducens: metal reduction in subsurface environments." Methe B.A., Nelson K.E., Eisen J.A., Paulsen I.T., Nelson W.C., Heidelberg J.F., Wu D., Wu M., Ward N.L., Beanan M.J., Dodson R.J., Madupu R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn M.L., Kolonay J.F. Fraser C.M.Science 302:1967-1969(2003) [PubMed: 14671304] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51573 / DSM 12127 / PCA. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE017180 Genomic DNA. Translation: AAR33470.1. |
| RefSeq | NP_951197.1. NC_002939.4. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1B4K based on UniProtKB Q59643. |
| ProteinModelPortal | Q74GV9. |
| SMR | Q74GV9. Positions 6-323. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 2687995. |
| GenomeReviews | Gene locus GSU0135 in contig AE017180_GR. |
| KEGG | gsu:GSU0135. |
| NMPDR | fig|243231.1.peg.135. |
| PATRIC | 22023018. VBIGeoSul17553_0136. |
| TIGR | GSU0135. |
Phylogenomic databases | |
| HOGENOM | HBG285270. |
| OMA | ADLCFCE. |
| PhylomeDB | Q74GV9. |
| ProtClustDB | PRK09283. |
Family and domain databases | |
| InterPro | IPR013785. Aldolase_TIM. IPR001731. Porphobilinogen_synth. [Graphical view] |
| Gene3D | G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. |
| KO | K01698. |
| PANTHER | PTHR11458. AlaD_dehydratase. 1 hit. |
| Pfam | PF00490. ALAD. 1 hit. [Graphical view] |
| PIRSF | PIRSF001415. Porphbilin_synth. 1 hit. |
| PRINTS | PR00144. DALDHYDRTASE. |
| SMART | SM01004. ALAD. 1 hit. [Graphical view] |
| PROSITE | PS00169. D_ALA_DEHYDRATASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q74GV9_GEOSL | ||||||||
| Accession | Primary (citable) accession number: Q74GV9 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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