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Q744K0

- Q744K0_MYCPA

UniProt

Q744K0 - Q744K0_MYCPA

Protein
Submitted name:

LigC

Gene

ligC

Organism
Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Enzyme and pathway databases

    BioCyciMAVI262316:GCQR-349-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    LigCImported
    Gene namesi
    Name:ligCImported
    Ordered Locus Names:MAP_0341Imported
    OrganismiMycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)Imported
    Taxonomic identifieri262316 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
    ProteomesiUP000000580: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi262316.MAP0341.

    Structurei

    3D structure databases

    ProteinModelPortaliQ744K0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q744K0-1 [UniParc]FASTAAdd to Basket

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    MDLPVMPPVS PMLAKSVGAI PPAASYEPKW DGFRSICFRD GDEVELGSRN    50
    ERPMTRYFPE LVAAVRAELP QRCVIDGEIV IATDHGLDFE ALQQRVHPAE 100
    SRVRMLAEAT PASFIAFDLL ALGDEDYTGR PFRERRAALL EAVGGPGPSI 150
    HVTPATTDLD TARRWFDEFE GAGLDGVVAK PLDITYQPDK RVMFKIKHER 200
    TADCVVAGYR VHKSGADAIG SLLLGLYQDD GQLASVGVIG AFPMAERRRL 250
    FTELQPLVTD FEDHPWNWAA HQAGERTPRK NEFSRWNAGK DLSFVPLRPE 300
    RVVEVRYDHM EGRRFRHTAQ FNRWRPDRDP RSCTYEQLEQ PVTFRLDDIV 350
    PGLGASRADH KPGKQIGAP 369
    Length:369
    Mass (Da):41,409
    Last modified:July 5, 2004 - v1
    Checksum:i16F4918C672B910C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016958 Genomic DNA. Translation: AAS02658.1.
    RefSeqiNP_959275.1. NC_002944.2.

    Genome annotation databases

    EnsemblBacteriaiAAS02658; AAS02658; MAP_0341.
    GeneIDi2720969.
    KEGGimpa:MAP0341.
    PATRICi17993040. VBIMycAvi108102_0363.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016958 Genomic DNA. Translation: AAS02658.1 .
    RefSeqi NP_959275.1. NC_002944.2.

    3D structure databases

    ProteinModelPortali Q744K0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262316.MAP0341.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS02658 ; AAS02658 ; MAP_0341 .
    GeneIDi 2720969.
    KEGGi mpa:MAP0341.
    PATRICi 17993040. VBIMycAvi108102_0363.

    Phylogenomic databases

    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci MAVI262316:GCQR-349-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of Mycobacterium avium subspecies paratuberculosis."
      Li L., Bannantine J.P., Zhang Q., Amonsin A., May B.J., Alt D., Banerji N., Kanjilal S., Kapur V.
      Proc. Natl. Acad. Sci. U.S.A. 102:12344-12349(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-968 / K-10Imported.

    Entry informationi

    Entry nameiQ744K0_MYCPA
    AccessioniPrimary (citable) accession number: Q744K0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3