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Protein
Submitted name:

Uncharacterized protein

Gene

MAP_0880

Organism
Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMAVI262316:GCQR-897-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:MAP_0880Imported
OrganismiMycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)Imported
Taxonomic identifieri262316 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
ProteomesiUP000000580 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi262316.MAP0880.

Structurei

3D structure databases

ProteinModelPortaliQ742F5.
SMRiQ742F5. Positions 16-299, 458-764.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiSKGIHLY.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q742F5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNAPRAWPAE PTATPRVKLT NADKVLYPAT GTTKADVFDY YTRIADVMIP
60 70 80 90 100
HIAGRPVTRK RWPNGVDQES FFEKQLASSA PDWLPRASVT HRSGTTTYPI
110 120 130 140 150
IDSATGLAWI AQQAALEVHV PQWRFVAEWT RSRAEELKPG PATRLVFDLD
160 170 180 190 200
PGEGVTMAQL AEVARAVRDL IDGIGLQTFP LTSGSKGLHL YTPLTEPVSS
210 220 230 240 250
KGATVLAKRV AQQLEKTMPK LVTSTMTKSL RAGKIFVDWS QNNGSKTTIA
260 270 280 290 300
PYSLRGRDHP TVAAPRTWDE LDDPALRHLR YDEVLTRVAR DGDLLAELDD
310 320 330 340 350
NQTPVPDRLT KYRSMRDASK TPEPVPDAKP AAGQGNTFVI QEHHARRLHY
360 370 380 390 400
DFRLERDGVL VSWAVPKNLP DTPAVNHLAV HTEDHPLEYG GFEGVIPKGE
410 420 430 440 450
YGAGRVVIWD SGTYDAEKFQ DDEVIVNLHG RKISGRYALI QTQGDQWLAH
460 470 480 490 500
RMKDQNVFEF DTIAPMLATH GSVSALKASQ WAFEGKWDGY RLLVEADHGT
510 520 530 540 550
LRVRSRRGRE VTGEYRELRS LAKALEEHHA VLDGEAVVLD KRGVPNFHEM
560 570 580 590 600
QNRGKSARVE FWAFDLLYLD GRSLLRARYR DRRKLLEMLA SGGALTVPEL
610 620 630 640 650
LPGDGDQALR QSAERGWEGV IAKRRDSTYQ PGRRSSSWIK DKHWNTQEVV
660 670 680 690 700
IGGWKAGEGG RSSGIGSLLM GIPGPGGLHF AGRVGTGFTE RDLANLKKTL
710 720 730 740 750
APLRTDQSPF DAPLPRSEAK GVTFVEPVLV GEVRYSEWTP DDRLRQSSWR
760
GLRPDKEASE VVRE
Length:764
Mass (Da):85,151
Last modified:July 4, 2004 - v1
Checksum:iEEF05FD0AE1E7B29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016958 Genomic DNA. Translation: AAS03197.1.
RefSeqiNP_959814.1. NC_002944.2.

Genome annotation databases

EnsemblBacteriaiAAS03197; AAS03197; MAP_0880.
KEGGimpa:MAP0880.
PATRICi17994171. VBIMycAvi108102_0919.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016958 Genomic DNA. Translation: AAS03197.1.
RefSeqiNP_959814.1. NC_002944.2.

3D structure databases

ProteinModelPortaliQ742F5.
SMRiQ742F5. Positions 16-299, 458-764.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262316.MAP0880.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS03197; AAS03197; MAP_0880.
KEGGimpa:MAP0880.
PATRICi17994171. VBIMycAvi108102_0919.

Phylogenomic databases

KOiK01971.
OMAiSKGIHLY.
OrthoDBiEOG661H49.

Enzyme and pathway databases

BioCyciMAVI262316:GCQR-897-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Mycobacterium avium subspecies paratuberculosis."
    Li L., Bannantine J.P., Zhang Q., Amonsin A., May B.J., Alt D., Banerji N., Kanjilal S., Kapur V.
    Proc. Natl. Acad. Sci. U.S.A. 102:12344-12349(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-968 / K-10Imported.

Entry informationi

Entry nameiQ742F5_MYCPA
AccessioniPrimary (citable) accession number: Q742F5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 4, 2004
Last sequence update: July 4, 2004
Last modified: March 31, 2015
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.