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Protein
Submitted name:

Uncharacterized protein

Gene

MAP_3352c

Organism
Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMAVI262316:GCQR-3396-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:MAP_3352cImported
OrganismiMycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)Imported
Taxonomic identifieri262316 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
ProteomesiUP000000580 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi262316.MAP3352c.

Structurei

3D structure databases

ProteinModelPortaliQ73UL4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

OMAiTRCQRGA.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q73UL4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMLMAQAVLP TRAELLAALS VAIDLGLGQP AEHMLRAALI ATRLCDRLGL
60 70 80 90 100
SRQQRDCVYY TTLVMWIGCH ADSHEYARWF GDDIAVRHDS YLVDWSGIPY
110 120 130 140 150
LRFLASNVGR GQPLAHRLSV MATLFANARG HISRLIHSHC ASAALLADRI
160 170 180 190 200
GLGPNVQAAL AYTFERYDGG GLPTGARGED IPIQMRIAQL ADMVEVHHRS
210 220 230 240 250
YGVAGAVAMV GARRGGQFDP GIADVFLRDA DAILAGPQTG DAWAAALREA
260 270 280 290 300
PDRHRVDEQS LDAALVALGD FVDLKCPFTL GHSRAVARLA GQAARAAGLD
310 320 330 340 350
ADAVALTRRA GHVHDLGRIG VSNQIWSRPG PLSGSQFERV RLHPYLTVRI
360 370 380 390 400
LDQVPGLRRL AEVAGNHHEC LDGSGYPRGL AGPALGMPDR ILAAAVCYQS
410 420 430 440 450
GREPRPYREQ LSEAEAARRL RGRVRCGELD PVAAEAVLHA AGQPVGPRPN
460 470 480 490 500
PRPDGLTPRE IEVLGHVARG ASNKEIAAAL VISEKTARNH VERTYAKIGV
510 520
SNRIGASMYA LQHGLVPAAP LHS
Length:523
Mass (Da):56,185
Last modified:July 5, 2004 - v1
Checksum:iE7A62D1DEDD124A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016958 Genomic DNA. Translation: AAS05902.1.
RefSeqiNP_962286.1. NC_002944.2.

Genome annotation databases

EnsemblBacteriaiAAS05902; AAS05902; MAP_3352c.
KEGGimpa:MAP3352c.
PATRICi17999508. VBIMycAvi108102_3561.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016958 Genomic DNA. Translation: AAS05902.1.
RefSeqiNP_962286.1. NC_002944.2.

3D structure databases

ProteinModelPortaliQ73UL4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262316.MAP3352c.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS05902; AAS05902; MAP_3352c.
KEGGimpa:MAP3352c.
PATRICi17999508. VBIMycAvi108102_3561.

Phylogenomic databases

OMAiTRCQRGA.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciMAVI262316:GCQR-3396-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Mycobacterium avium subspecies paratuberculosis."
    Li L., Bannantine J.P., Zhang Q., Amonsin A., May B.J., Alt D., Banerji N., Kanjilal S., Kapur V.
    Proc. Natl. Acad. Sci. U.S.A. 102:12344-12349(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-968 / K-10Imported.

Entry informationi

Entry nameiQ73UL4_MYCPA
AccessioniPrimary (citable) accession number: Q73UL4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 1, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.