Putative uncharacterized protein - Mycobacterium paratuberculosis

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Unreviewed, UniProtKB/TrEMBL Q73UL4 (Q73UL4_MYCPA)

Last modified June 16, 2009. Version 34. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL AAS05902.1

Gene names

Ordered Locus Names:

MAP_3352c

Organism

Mycobacterium paratuberculosis [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium avium complex (MAC)

Protein attributes

Sequence length	523 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707V5

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000707V5
Ligand	DNA-binding RuleBase RU000707V5
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro two-component signal transduction system (phosphorelay) Inferred from electronic annotation. Source: InterPro
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro two-component response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q73UL4-1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: E7A62D1DEDD124A1
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523

56,185

        10         20         30         40         50         60 
MMLMAQAVLP TRAELLAALS VAIDLGLGQP AEHMLRAALI ATRLCDRLGL SRQQRDCVYY 

        70         80         90        100        110        120 
TTLVMWIGCH ADSHEYARWF GDDIAVRHDS YLVDWSGIPY LRFLASNVGR GQPLAHRLSV 

       130        140        150        160        170        180 
MATLFANARG HISRLIHSHC ASAALLADRI GLGPNVQAAL AYTFERYDGG GLPTGARGED 

       190        200        210        220        230        240 
IPIQMRIAQL ADMVEVHHRS YGVAGAVAMV GARRGGQFDP GIADVFLRDA DAILAGPQTG 

       250        260        270        280        290        300 
DAWAAALREA PDRHRVDEQS LDAALVALGD FVDLKCPFTL GHSRAVARLA GQAARAAGLD 

       310        320        330        340        350        360 
ADAVALTRRA GHVHDLGRIG VSNQIWSRPG PLSGSQFERV RLHPYLTVRI LDQVPGLRRL 

       370        380        390        400        410        420 
AEVAGNHHEC LDGSGYPRGL AGPALGMPDR ILAAAVCYQS GREPRPYREQ LSEAEAARRL 

       430        440        450        460        470        480 
RGRVRCGELD PVAAEAVLHA AGQPVGPRPN PRPDGLTPRE IEVLGHVARG ASNKEIAAAL 

       490        500        510        520 
VISEKTARNH VERTYAKIGV SNRIGASMYA LQHGLVPAAP LHS

References

[1]

"The complete genome sequence of Mycobacterium avium subspecies paratuberculosis."
Li L., Bannantine J.P., Zhang Q., Amonsin A., May B.J., Alt D., Banerji N., Kanjilal S., Kapur V.
Proc. Natl. Acad. Sci. U.S.A. 102:12344-12349(2005) [PubMed: 16116077] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-968 / K-10.

Cross-references

Sequence databases
	AE016958 Genomic DNA. Translation: AAS05902.1.
RefSeq	NP_962286.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	2721208.
GenomeReviews	Gene locus MAP_3352c in contig AE016958_GR.
KEGG	mpa:MAP3352c.
NMPDR	fig\|262316.1.peg.3352.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q73UL4.
OMA	Q73UL4. CSSNAAR.
Family and domain databases
InterPro	IPR003607. Met-dep_phosphohydro_HD. IPR006674. Met-dep_phosphohydro_HD_sub. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. Wing_hlx_DNA_bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF00196. GerE. 1 hit. PF01966. HD. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
ProDom	PD000307. HTH_LuxR. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00471. HDc. 1 hit. SM00421. HTH_LUXR. 1 hit. [Graphical view]
PROSITE	PS50043. HTH_LUXR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q73UL4_MYCPA

Accession

Primary (citable) accession number: Q73UL4

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	June 16, 2009
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information