HAMP domain/GGDEF domain/EAL domain protein - Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222)

Preferred order of sections

Names and origin

Protein names

Submitted name:
HAMP domain/GGDEF domain/EAL domain protein EMBL AAS10626.1

Gene names

Ordered Locus Names:

TDE_0128

Organism

Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) [Complete proteome] [HAMAP]

Taxonomic identifier

243275 [NCBI]

Taxonomic lineage

Bacteria › Spirochaetes › Spirochaetales › Spirochaetaceae › Treponema

Protein attributes

Sequence length	801 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q73RG0 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: B7CD0F16DAEBD696
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FASTA

801

91,939

        10         20         30         40         50         60 
MRLKQKIVLS NAIVFSALII ISVFFNFFYA ANIFSTNLNN KNKLKAKLIA QEIDEWLIEK 

        70         80         90        100        110        120 
KTVIEQTIDT LIYMDITDYE KCTDFLANLN RLNPETDYAV FYETGLFANG QNWVPPAFYD 

       130        140        150        160        170        180 
SRKRPWYIEA KSTKETIITN PYHSISSRPD SIAFSIVKQF TTKSGVDGVF LGEIRIKELL 

       190        200        210        220        230        240 
SLIEKFKNED GGYAFLIGKD YRILSHPNEK YQFNLDNFTE IYNIEGGIDF IEYIAKLKID 

       250        260        270        280        290        300 
DGYNRSLPIV KDYDGVERFF YFAQSETTGW TVGFTIPASD FYRPINGLKF RAILFACIFI 

       310        320        330        340        350        360 
VFVSILSFLI AKKVASPIET ITNRLEKAAK NNELIKFDFL DRQNHELARI AKSFNSVVKN 

       370        380        390        400        410        420 
AKSNLQGEAN FTLNSTTLTQ KIDNIIINMN ADEEVYLLYL DIDKFKTINQ LWGYYAGNAL 

       430        440        450        460        470        480 
IQHIYSMILA HIKSFNIPED SFMHVIGDEF SIFYFGNEEE VCRFTQTLID KINSEYFTWN 

       490        500        510        520        530        540 
EKKLTISISV GIVNIPKIPQ SSQEIISNAY DACSIAFRKG GGCYELLLSS GITGFSRGNI 

       550        560        570        580        590        600 
SFWLNTIQKA LKEDNFVLYA QAIMPLNDLL HRPKYEILIR LKTNDDHIIM PDVFIPIAER 

       610        620        630        640        650        660 
YNLIYEVDKW VIRNAFAFFA EATSKGDLNE DAIFSINISA DSFFSNDLVE FIAESRKTLN 

       670        680        690        700        710        720 
VPAHNFCFEI TESCAVRNLE ATSTFVTELR KQGFSFSLDD FGKGFSSFPY LKTLPIDYVK 

       730        740        750        760        770        780 
IDGSFIKSID KDYIDFSMVK TMRDMCYHLG LYTIGEYAET DKIVSILKDI GVDYGQGYAF 

       790        800 
QKPIPIAEAI KLQNDRNGYR F

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References

[1]

"Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes."
Seshadri R., Myers G.S.A., Tettelin H., Eisen J.A., Heidelberg J.F., Dodson R.J., Davidsen T.M., DeBoy R.T., Fouts D.E., Haft D.H., Selengut J., Ren Q., Brinkac L.M., Madupu R., Kolonay J.F., Durkin S.A., Daugherty S.C., Shetty J.

Paulsen I.T.
Proc. Natl. Acad. Sci. U.S.A. 101:5646-5651(2004) [PubMed: 15064399] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35405 / CIP 103919 / DSM 14222.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017226 Genomic DNA. Translation: AAS10626.1.
RefSeq	NP_970745.1. NC_002967.9.
3D structure databases
ProteinModelPortal	Q73RG0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2739584.
GenomeReviews	Gene locus TDE_0128 in contig AE017226_GR.
KEGG	tde:TDE0128.
NMPDR	fig\|243275.1.peg.128.
PATRIC	20522518. VBITreDen445_0128.
TIGR	TDE_0128.
Phylogenomic databases
OMA	DASATHN.
Enzyme and pathway databases
BioCyc	TDEN243275:TDE_0128-MONOMER.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR004010. Cache_domain. IPR000160. Diguanylate_cyclase-pred. IPR001633. Diguanylate_PEstase_EAL_dom. IPR003660. HAMP_linker_domain. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
Pfam	PF02743. Cache_1. 1 hit. PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. PF00672. HAMP. 1 hit. [Graphical view]
SMART	SM00052. EAL. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q73RG0_TREDE

Accession

Primary (citable) accession number: Q73RG0

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	January 25, 2012
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information