Q73NV4 (RS7_TREDE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S7

Gene names

Name:	rpsG
Ordered Locus Names:	TDE_1048

Organism

Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) [Complete proteome] [HAMAP]

Taxonomic identifier

243275 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Spirochaetes › Spirochaetia › Spirochaetales › Spirochaetaceae › Treponema › Treponema denticola

Protein attributes

Sequence length	156 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA By similarity. HAMAP-Rule MF_00480
Subunit structure	Part of the 30S ribosomal subunit. Contacts proteins S9 and S11 By similarity.
Sequence similarities	Belongs to the ribosomal protein S7P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding tRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 156	156	30S ribosomal protein S7 HAMAP-Rule MF_00480		PRO_0000124372

Sequences

	Sequence		Length	Mass (Da)
	Q73NV4 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 9366310E0D0F9669	FASTA	156	17,633
	10 20 30 40 50 60 MGRGKITARR PVAPDSKYNS VVVTRFIGRM MLSGKKSITT KIMYDSFDKI KEKTGEEPLA 70 80 90 100 110 120 VFSKALDNVK PVVEVKSRRV GGATYQVPMD IPEGRREALA MRWIIGAARK RSGHEMSERL 130 140 150 ASELIDAYNN TGTAFKKKEE VHRMAEANKA FAHFRW

References

[1]

"Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes." Seshadri R., Myers G.S.A., Tettelin H., Eisen J.A., Heidelberg J.F., Dodson R.J., Davidsen T.M., DeBoy R.T., Fouts D.E., Haft D.H., Selengut J., Ren Q., Brinkac L.M., Madupu R., Kolonay J.F., Durkin S.A., Daugherty S.C., Shetty J. , Shvartsbeyn A., Gebregeorgis E., Geer K., Tsegaye G., Malek J.A., Ayodeji B., Shatsman S., McLeod M.P., Smajs D., Howell J.K., Pal S., Amin A., Vashisth P., McNeill T.Z., Xiang Q., Sodergren E., Baca E., Weinstock G.M., Norris S.J., Fraser C.M., Paulsen I.T. Proc. Natl. Acad. Sci. U.S.A. 101:5646-5651(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35405 / CIP 103919 / DSM 14222.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017226 Genomic DNA. Translation: AAS11537.1.
RefSeq	NP_971656.1. NC_002967.9.
3D structure databases
ProteinModelPortal	Q73NV4.
SMR	Q73NV4. Positions 10-148.
ModBase	Search...
Protein-protein interaction databases
STRING	243275.TDE1048.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAS11537; AAS11537; TDE_1048.
GeneID	2741322.
KEGG	tde:TDE1048.
PATRIC	20524300. VBITreDen445_1008.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0049.
KO	K02992.
OMA	RREKTMT.
ProtClustDB	PRK05302.
Family and domain databases
Gene3D	1.10.455.10. 1 hit.
HAMAP	MF_00480_B. Ribosomal_S7_B.
InterPro	IPR000235. Ribosomal_S5/S7. IPR005717. Ribosomal_S7_bac/org-type. IPR020606. Ribosomal_S7_CS. IPR023798. Ribosomal_S7_dom. [Graphical view]
PANTHER	PTHR11205. PTHR11205. 1 hit. PTHR11205:SF13. PTHR11205:SF13. 1 hit.
Pfam	PF00177. Ribosomal_S7. 1 hit. [Graphical view]
PIRSF	PIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAM	SSF47973. Ribosomal_S7. 1 hit.
TIGRFAMs	TIGR01029. rpsG_bact. 1 hit.
PROSITE	PS00052. RIBOSOMAL_S7. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS7_TREDE

Accession

Primary (citable) accession number: Q73NV4

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 29, 2005
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program