Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Type III secretion system protein, YscC family

Gene

DVUA0112

Organism
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciDVUL882:GJIL-3581-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion system protein, YscC familyImported
Gene namesi
Ordered Locus Names:DVUA0112Imported
Encoded oniPlasmid pDVImported
OrganismiDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)Imported
Taxonomic identifieri882 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000002194 Componenti: Plasmid pDV

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini162 – 292Secretin_NInterPro annotationAdd BLAST131

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000228558.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.
PhylomeDBiQ72WH7.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q72WH7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLCLHAPSRC EAAPAFPHTY SHYSEQEQLT ALLADFGRTQ GLATSFSPGV
60 70 80 90 100
TGTVSGRFED VAPEKFLQGM KAAFGVSWYR LGPTLHFYHE AETTRIFISP
110 120 130 140 150
RVMSAESLYR MLRQSSVLSP QLPAELMPGG AMVVVSGPPA YLDQIQAAVT
160 170 180 190 200
AFEEAQTGNF GMKVFPLKYA WAEDITVNSM DKTVTLPGVA SILRAMVSGS
210 220 230 240 250
PSSATRVTQE TATVDKLSGT GLISQGRQQK ESGQSNQAQR GGQASQQDSG
260 270 280 290 300
GAQDGQQVSI MADPRVNAVI VHDAVYRMPY YESVIGDLDR PVELVEIHAA
310 320 330 340 350
IVDIDTNFKR DLGVTYQATV GKDQRWAGGA DVSTGTDKFT PLPVPGVPQG
360 370 380 390 400
SGLTLSTIYT MGSDYFLARI NALEKNGEAR MLGRPSVLTV DNVQATLENT
410 420 430 440 450
STYYIQVQGY QAVDLFKVEA GTVLRVTPHI INNDDGTDAI KLVVSVQDDQ
460 470 480 490 500
NNQTTPTSTS TTQAIPPIKQ TKINTQAIIG AGQSLLIGGY YYEQKATSAD
510 520 530 540 550
GVPILMNIPV LGNLFKTQSK ENKRMERLIL ITPKVVRLDN LPGTPPRVDD
560 570 580 590 600
PAFHRTATQS DYAERTPTPP PSRRSGCSRA PDNAPEAASG AAGGTGGTGV
610 620
TANTEGGTTP QAATSPVPAY GVAP
Length:624
Mass (Da):66,578
Last modified:July 5, 2004 - v1
Checksum:i38EC3BFAE0634B6D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017286 Genomic DNA. Translation: AAS94350.1.
RefSeqiWP_011176690.1. NC_005863.1.
YP_009152.1. NC_005863.1.

Genome annotation databases

EnsemblBacteriaiAAS94350; AAS94350; DVUA0112.
GeneIDi2781618.
KEGGidvu:DVUA0112.
PATRICi32066534. VBIDesVul119526_3197.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017286 Genomic DNA. Translation: AAS94350.1.
RefSeqiWP_011176690.1. NC_005863.1.
YP_009152.1. NC_005863.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS94350; AAS94350; DVUA0112.
GeneIDi2781618.
KEGGidvu:DVUA0112.
PATRICi32066534. VBIDesVul119526_3197.

Phylogenomic databases

HOGENOMiHOG000228558.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.
PhylomeDBiQ72WH7.

Enzyme and pathway databases

BioCyciDVUL882:GJIL-3581-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ72WH7_DESVH
AccessioniPrimary (citable) accession number: Q72WH7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 2, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.