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Protein
Submitted name:

D-alanine--d-alanine ligase

Gene

ddl

Organism
Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciLINT267671:GHQI-1302-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
D-alanine--d-alanine ligaseImported
Gene namesi
Name:ddlImported
Ordered Locus Names:LIC_11304Imported
OrganismiLeptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)Imported
Taxonomic identifieri267671 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesLeptospiralesLeptospiraceaeLeptospira
ProteomesiUP000007037 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi267671.LIC11304.

Structurei

3D structure databases

ProteinModelPortaliQ72SS1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01921.
OMAiSREAQIP.
OrthoDBiEOG66MQKK.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72SS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKMTPTVLV YADLHEFEGN FPEIYKQEWE SKKSVDAILE LLNEVGESIE
60 70 80 90 100
LVVTPNELLE KLKCYCDLDF SKRPVIFHLM EGFCSRNRES LIPAVAELFG
110 120 130 140 150
FPHTGSDSYS QNVSLDKNLT RIFAQSIGVP VASGFWIRSK DVLFKELLQL
160 170 180 190 200
ECNSEIKKRF SFSKGNELNL KNFSFPAFIK PAGEGSSLGI GEKNIIYSFE
210 220 230 240 250
ELNTLLSEAP EIFFPYLLEE YLTGNEYTIS VIGSATFGYK VSSAGRLILR
260 270 280 290 300
EDLKVEDVYG EKTKSKSIMP ETLVFDCPKD LEVIIQQQSV LFCESLGTSG
310 320 330 340 350
PARLDWKLDS LGNPFFLEMN LTPGLSPFYS TFPICYRHSL GDEKNLFQEI
360 370
LKIARLDFET DRFLYSKNKI RNLI
Length:374
Mass (Da):42,571
Last modified:July 5, 2004 - v1
Checksum:iF3944060831D47BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016823 Genomic DNA. Translation: AAS69907.1.
RefSeqiWP_001038596.1. NC_005823.1.

Genome annotation databases

EnsemblBacteriaiAAS69907; AAS69907; LIC_11304.
KEGGilic:LIC11304.
PATRICi22374883. VBILepInt6257_1609.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016823 Genomic DNA. Translation: AAS69907.1.
RefSeqiWP_001038596.1. NC_005823.1.

3D structure databases

ProteinModelPortaliQ72SS1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi267671.LIC11304.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS69907; AAS69907; LIC_11304.
KEGGilic:LIC11304.
PATRICi22374883. VBILepInt6257_1609.

Phylogenomic databases

KOiK01921.
OMAiSREAQIP.
OrthoDBiEOG66MQKK.

Enzyme and pathway databases

BioCyciLINT267671:GHQI-1302-MONOMER.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics of two Leptospira interrogans serovars reveals novel insights into physiology and pathogenesis."
    Nascimento A.L.T.O., Ko A.I., Martins E.A.L., Monteiro-Vitorello C.B., Ho P.L., Haake D.A., Verjovski-Almeida S., Hartskeerl R.A., Marques M.V., Oliveira M.C., Menck C.F.M., Leite L.C.C., Carrer H., Coutinho L.L., Degrave W.M., Dellagostin O.A., El-Dorry H., Ferro E.S.
    , Ferro M.I.T., Furlan L.R., Gamberini M., Giglioti E.A., Goes-Neto A., Goldman G.H., Goldman M.H.S., Harakava R., Jeronimo S.M.B., Junqueira-de-Azevedo I.L.M., Kimura E.T., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Marino C.L., Nunes L.R., de Oliveira R.C., Pereira G.G., Reis M.S., Schriefer A., Siqueira W.J., Sommer P., Tsai S.M., Simpson A.J.G., Ferro J.A., Camargo L.E.A., Kitajima J.P., Setubal J.C., Van Sluys M.A.
    J. Bacteriol. 186:2164-2172(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Fiocruz L1-130Imported.

Entry informationi

Entry nameiQ72SS1_LEPIC
AccessioniPrimary (citable) accession number: Q72SS1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: July 22, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.