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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

LIC_12677

Organism
Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciLINT267671:GHQI-2670-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:LIC_12677Imported
OrganismiLeptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)Imported
Taxonomic identifieri267671 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesLeptospiraceaeLeptospira
ProteomesiUP000007037 Componenti: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi267671.LIC12677.

Structurei

3D structure databases

ProteinModelPortaliQ72P00.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiVERHECT.
OrthoDBiEOG65F8PX.

Family and domain databases

Gene3Di2.20.140.10. 2 hits.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR008893. WGR_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 2 hits.
PF05406. WGR. 2 hits.
[Graphical view]
SMARTiSM00773. WGR. 2 hits.
[Graphical view]
SUPFAMiSSF142921. SSF142921. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72P00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNHKLIFRDD KSDKFWNIET SGNSFTVTYG KTGTAGTSQT KTFETEETCI
60 70 80 90 100
KEARKLLSEK LKKGYIEGND RTEKLTSNND KKHKSNQQEA DKIVISKSEE
110 120 130 140 150
KTKSAPQKVI EESENEIKQS SQTSANKKEN LKQNSQTQEQ NSNPLPSENS
160 170 180 190 200
TELNKISLYY QGDGSDKVYH VNIDPEGDGY VVHFAFGRRG SSLQTGTKTS
210 220 230 240 250
KPVSYEAAQK IMRQLVNSKM AKGYTEIESG TPYLHSTKEE RVSGVHCQLL
260 270 280 290 300
NPIDEEELST YVEDDQYGAQ EKLDGNRMMI RKIGDNVEGI NRKGLIIAIS
310 320 330 340 350
QILHDHSLSF SEDFILDGEV IGDVFFPFDI FSKDGKDIQH LPYQERYAIL
360 370 380 390 400
ESILKDQDEI FHIVKLVKST KGKKVLLEEL REKQKEGIVF KDLNAPYKAG
410 420 430 440 450
RPSSKGSQIK FKFYETATVS VETVNLKRSV SMRLYNGNEW VSVGNVTIPV
460 470 480 490 500
NFAIPKENDI IEVRYLYAYK GGSLYQPTYL GARTDADEND CDLKQLKYKN

A
Length:501
Mass (Da):56,786
Last modified:July 5, 2004 - v1
Checksum:i5A21378B70EFCEEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016823 Genomic DNA. Translation: AAS71236.1.
RefSeqiYP_002599.1. NC_005823.1.

Genome annotation databases

EnsemblBacteriaiAAS71236; AAS71236; LIC_12677.
KEGGilic:LIC12677.
PATRICi22378119. VBILepInt6257_3213.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016823 Genomic DNA. Translation: AAS71236.1.
RefSeqiYP_002599.1. NC_005823.1.

3D structure databases

ProteinModelPortaliQ72P00.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi267671.LIC12677.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS71236; AAS71236; LIC_12677.
KEGGilic:LIC12677.
PATRICi22378119. VBILepInt6257_3213.

Phylogenomic databases

KOiK01971.
OMAiVERHECT.
OrthoDBiEOG65F8PX.

Enzyme and pathway databases

BioCyciLINT267671:GHQI-2670-MONOMER.

Family and domain databases

Gene3Di2.20.140.10. 2 hits.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR008893. WGR_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 2 hits.
PF05406. WGR. 2 hits.
[Graphical view]
SMARTiSM00773. WGR. 2 hits.
[Graphical view]
SUPFAMiSSF142921. SSF142921. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics of two Leptospira interrogans serovars reveals novel insights into physiology and pathogenesis."
    Nascimento A.L.T.O., Ko A.I., Martins E.A.L., Monteiro-Vitorello C.B., Ho P.L., Haake D.A., Verjovski-Almeida S., Hartskeerl R.A., Marques M.V., Oliveira M.C., Menck C.F.M., Leite L.C.C., Carrer H., Coutinho L.L., Degrave W.M., Dellagostin O.A., El-Dorry H., Ferro E.S.
    , Ferro M.I.T., Furlan L.R., Gamberini M., Giglioti E.A., Goes-Neto A., Goldman G.H., Goldman M.H.S., Harakava R., Jeronimo S.M.B., Junqueira-de-Azevedo I.L.M., Kimura E.T., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Marino C.L., Nunes L.R., de Oliveira R.C., Pereira G.G., Reis M.S., Schriefer A., Siqueira W.J., Sommer P., Tsai S.M., Simpson A.J.G., Ferro J.A., Camargo L.E.A., Kitajima J.P., Setubal J.C., Van Sluys M.A.
    J. Bacteriol. 186:2164-2172(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Fiocruz L1-130Imported.

Entry informationi

Entry nameiQ72P00_LEPIC
AccessioniPrimary (citable) accession number: Q72P00
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 1, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.