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Q72L77

- RL35_THET2

UniProt

Q72L77 - RL35_THET2

Protein

50S ribosomal protein L35

Gene

rpmI

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-188-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L35UniRule annotation
    Gene namesi
    Name:rpmIUniRule annotation
    Ordered Locus Names:TT_C0184
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 656450S ribosomal protein L35PRO_0000177442Add
    BLAST

    Structurei

    Secondary structure

    1
    65
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi8 – 114
    Beta strandi14 – 163
    Beta strandi18 – 203
    Beta strandi22 – 254
    Beta strandi30 – 323
    Helixi38 – 458
    Beta strandi46 – 494
    Helixi52 – 587

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1VSAX-ray3.71a1-65[»]
    1VSPX-ray3.83a1-65[»]
    3D5BX-ray3.2181-65[»]
    3D5DX-ray3.2181-65[»]
    3F1FX-ray3.0081-65[»]
    3F1HX-ray3.0081-65[»]
    3MRZX-ray3.6252-65[»]
    3MS1X-ray3.6252-65[»]
    3PYOX-ray3.5052-64[»]
    3PYRX-ray3.5052-64[»]
    3PYTX-ray3.4052-64[»]
    3PYVX-ray3.4052-64[»]
    4KBUX-ray3.8682-65[»]
    4KBWX-ray3.8682-65[»]
    4KCZX-ray3.5082-65[»]
    4KD2X-ray3.5082-65[»]
    4KD9X-ray3.5082-65[»]
    4KDBX-ray3.5082-65[»]
    4KDHX-ray4.0082-65[»]
    4KDKX-ray4.0082-65[»]
    4KFIX-ray3.4082-64[»]
    4KFLX-ray3.4082-64[»]
    4L6JX-ray3.4052-64[»]
    4L6LX-ray3.4052-64[»]
    ProteinModelPortaliQ72L77.
    SMRiQ72L77. Positions 1-64.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ72L77.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L35P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0291.
    KOiK02916.
    OMAiRFSITAR.
    OrthoDBiEOG651T3B.

    Family and domain databases

    HAMAPiMF_00514. Ribosomal_L35.
    InterProiIPR021137. Ribosomal_L35.
    IPR018265. Ribosomal_L35_CS.
    IPR001706. Ribosomal_L35_non-mt.
    [Graphical view]
    PfamiPF01632. Ribosomal_L35p. 1 hit.
    [Graphical view]
    PRINTSiPR00064. RIBOSOMALL35.
    TIGRFAMsiTIGR00001. rpmI_bact. 1 hit.
    PROSITEiPS00936. RIBOSOMAL_L35. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q72L77-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPKMKTHKGA KKRVKITASG KVVAMKTGKR HLNWQKSGKE IRQKGRKFVL   50
    AKPEAERIKL LLPYE 65
    Length:65
    Mass (Da):7,484
    Last modified:January 23, 2007 - v3
    Checksum:i05D4C15C51166C43
    GO

    Sequence cautioni

    The sequence AAS80532.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS80532.1. Different initiation.
    RefSeqiYP_004159.2. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS80532; AAS80532; TT_C0184.
    GeneIDi2775180.
    KEGGitth:TTC0184.
    PATRICi23950761. VBITheThe54392_0185.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS80532.1 . Different initiation.
    RefSeqi YP_004159.2. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1VSA X-ray 3.71 a 1-65 [» ]
    1VSP X-ray 3.83 a 1-65 [» ]
    3D5B X-ray 3.21 8 1-65 [» ]
    3D5D X-ray 3.21 8 1-65 [» ]
    3F1F X-ray 3.00 8 1-65 [» ]
    3F1H X-ray 3.00 8 1-65 [» ]
    3MRZ X-ray 3.62 5 2-65 [» ]
    3MS1 X-ray 3.62 5 2-65 [» ]
    3PYO X-ray 3.50 5 2-64 [» ]
    3PYR X-ray 3.50 5 2-64 [» ]
    3PYT X-ray 3.40 5 2-64 [» ]
    3PYV X-ray 3.40 5 2-64 [» ]
    4KBU X-ray 3.86 8 2-65 [» ]
    4KBW X-ray 3.86 8 2-65 [» ]
    4KCZ X-ray 3.50 8 2-65 [» ]
    4KD2 X-ray 3.50 8 2-65 [» ]
    4KD9 X-ray 3.50 8 2-65 [» ]
    4KDB X-ray 3.50 8 2-65 [» ]
    4KDH X-ray 4.00 8 2-65 [» ]
    4KDK X-ray 4.00 8 2-65 [» ]
    4KFI X-ray 3.40 8 2-64 [» ]
    4KFL X-ray 3.40 8 2-64 [» ]
    4L6J X-ray 3.40 5 2-64 [» ]
    4L6L X-ray 3.40 5 2-64 [» ]
    ProteinModelPortali Q72L77.
    SMRi Q72L77. Positions 1-64.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS80532 ; AAS80532 ; TT_C0184 .
    GeneIDi 2775180.
    KEGGi tth:TTC0184.
    PATRICi 23950761. VBITheThe54392_0185.

    Phylogenomic databases

    eggNOGi COG0291.
    KOi K02916.
    OMAi RFSITAR.
    OrthoDBi EOG651T3B.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-188-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q72L77.

    Family and domain databases

    HAMAPi MF_00514. Ribosomal_L35.
    InterProi IPR021137. Ribosomal_L35.
    IPR018265. Ribosomal_L35_CS.
    IPR001706. Ribosomal_L35_non-mt.
    [Graphical view ]
    Pfami PF01632. Ribosomal_L35p. 1 hit.
    [Graphical view ]
    PRINTSi PR00064. RIBOSOMALL35.
    TIGRFAMsi TIGR00001. rpmI_bact. 1 hit.
    PROSITEi PS00936. RIBOSOMAL_L35. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL35_THET2
    AccessioniPrimary (citable) accession number: Q72L77
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 11, 2004
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 65 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3