50S ribosomal protein L35 - Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)

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Q72L77 (RL35_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 60. History...

Clusters with 100%, 90%, 50% identity |

Documents (3) |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
50S ribosomal protein L35

Gene names

Name:	rpmI
Ordered Locus Names:	TT_C0184

Organism

Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus ›

Protein attributes

Sequence length	65 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities	Belongs to the ribosomal protein L35P family.
Sequence caution	The sequence AAS80532.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	3D-structure Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Initiator methionine

1

Removed By similarity

Chain

64

50S ribosomal protein L35 HAMAP-Rule MF_00514

PRO_0000177442

Secondary structure

1

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65

Helix Strand Turn

Sequences

Sequence

Length

Mass (Da)

Tools

Q72L77 [UniParc].

Last modified January 23, 2007. Version 3.
Checksum: 05D4C15C51166C43
Show »

65

7,484

        10         20         30         40         50         60 
MPKMKTHKGA KKRVKITASG KVVAMKTGKR HLNWQKSGKE IRQKGRKFVL AKPEAERIKL 


LLPYE

References

[1]

"The genome sequence of the extreme thermophile Thermus thermophilus."
Henne A., Brueggemann H., Raasch C., Wiezer A., Hartsch T., Liesegang H., Johann A., Lienard T., Gohl O., Martinez-Arias R., Jacobi C., Starkuviene V., Schlenczeck S., Dencker S., Huber R., Klenk H.-P., Kramer W., Merkl R., Gottschalk G., Fritz H.-J.
Nat. Biotechnol. 22:547-553(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HB27 / ATCC BAA-163 / DSM 7039.

+

Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE017221 Genomic DNA. Translation: AAS80532.1. Different initiation.

RefSeq

YP_004159.2. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1VSA	X-ray	3.71	a	1-65	[»]
1VSP	X-ray	3.83	a	1-65	[»]
3D5B	X-ray	3.21	8	1-65	[»]
3D5D	X-ray	3.21	8	1-65	[»]
3F1F	X-ray	3.00	8	1-65	[»]
3F1H	X-ray	3.00	8	1-65	[»]
3MRZ	X-ray	3.62	5	2-65	[»]
3MS1	X-ray	3.62	5	2-65	[»]
3PYO	X-ray	3.50	5	2-64	[»]
3PYR	X-ray	3.50	5	2-64	[»]
3PYT	X-ray	3.40	5	2-64	[»]
3PYV	X-ray	3.40	5	2-64	[»]

ProteinModelPortal

SMR

Q72L77. Positions 1-64.

ModBase

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

AAS80532; AAS80532; TT_C0184.

GeneID

KEGG

PATRIC

23950761. VBITheThe54392_0185.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

KO

OMA

ProtClustDB

Enzyme and pathway databases

BioCyc

TTHE262724:GCAT-188-MONOMER.

Family and domain databases

HAMAP

MF_00514. Ribosomal_L35.

InterPro

IPR021137. Ribosomal_L35.
IPR018265. Ribosomal_L35_CS.
IPR001706. Ribosomal_L35_non-mt.
[Graphical view]

Pfam

PF01632. Ribosomal_L35p. 1 hit.
[Graphical view]

PRINTS

PR00064. RIBOSOMALL35.

TIGRFAMs

TIGR00001. rpmI_bact. 1 hit.

PROSITE

PS00936. RIBOSOMAL_L35. 1 hit.
[Graphical view]

ProtoNet

Other

EvolutionaryTrace

Entry information

Entry name

RL35_THET2

Accession

Primary (citable) accession number: Q72L77

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 11, 2004
Last sequence update:	January 23, 2007
Last modified:	May 29, 2013
This is version 60 of the entry and version 3 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents