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Q72L77

- RL35_THET2

UniProt

Q72L77 - RL35_THET2

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Protein

50S ribosomal protein L35

Gene

rpmI

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-188-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L35UniRule annotation
Gene namesi
Name:rpmIUniRule annotation
Ordered Locus Names:TT_C0184
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 656450S ribosomal protein L35PRO_0000177442Add
BLAST

Structurei

Secondary structure

1
65
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi8 – 114Combined sources
Beta strandi14 – 163Combined sources
Beta strandi18 – 203Combined sources
Beta strandi22 – 254Combined sources
Beta strandi30 – 323Combined sources
Helixi38 – 458Combined sources
Beta strandi46 – 494Combined sources
Helixi52 – 587Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71a1-65[»]
1VSPX-ray3.83a1-65[»]
3D5BX-ray3.2181-65[»]
3D5DX-ray3.2181-65[»]
3F1FX-ray3.0081-65[»]
3F1HX-ray3.0081-65[»]
3MRZX-ray3.6252-65[»]
3MS1X-ray3.6252-65[»]
3PYOX-ray3.5052-64[»]
3PYRX-ray3.5052-64[»]
3PYTX-ray3.4052-64[»]
3PYVX-ray3.4052-64[»]
4KBUX-ray3.8682-65[»]
4KBWX-ray3.8682-65[»]
4KCZX-ray3.5082-65[»]
4KD2X-ray3.5082-65[»]
4KD9X-ray3.5082-65[»]
4KDBX-ray3.5082-65[»]
4KDHX-ray4.0082-65[»]
4KDKX-ray4.0082-65[»]
4KFIX-ray3.4082-64[»]
4KFLX-ray3.4082-64[»]
4L6JX-ray3.4052-64[»]
4L6LX-ray3.4052-64[»]
4QS1X-ray3.8082-65[»]
4QS3X-ray3.8082-65[»]
ProteinModelPortaliQ72L77.
SMRiQ72L77. Positions 1-64.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72L77.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L35P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0291.
KOiK02916.
OMAiRFSITAR.
OrthoDBiEOG651T3B.

Family and domain databases

HAMAPiMF_00514. Ribosomal_L35.
InterProiIPR021137. Ribosomal_L35.
IPR018265. Ribosomal_L35_CS.
IPR001706. Ribosomal_L35_non-mt.
[Graphical view]
PfamiPF01632. Ribosomal_L35p. 1 hit.
[Graphical view]
PRINTSiPR00064. RIBOSOMALL35.
TIGRFAMsiTIGR00001. rpmI_bact. 1 hit.
PROSITEiPS00936. RIBOSOMAL_L35. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q72L77-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPKMKTHKGA KKRVKITASG KVVAMKTGKR HLNWQKSGKE IRQKGRKFVL
60
AKPEAERIKL LLPYE
Length:65
Mass (Da):7,484
Last modified:January 23, 2007 - v3
Checksum:i05D4C15C51166C43
GO

Sequence cautioni

The sequence AAS80532.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS80532.1. Different initiation.
RefSeqiYP_004159.2. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS80532; AAS80532; TT_C0184.
GeneIDi2775180.
KEGGitth:TTC0184.
PATRICi23950761. VBITheThe54392_0185.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS80532.1 . Different initiation.
RefSeqi YP_004159.2. NC_005835.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 a 1-65 [» ]
1VSP X-ray 3.83 a 1-65 [» ]
3D5B X-ray 3.21 8 1-65 [» ]
3D5D X-ray 3.21 8 1-65 [» ]
3F1F X-ray 3.00 8 1-65 [» ]
3F1H X-ray 3.00 8 1-65 [» ]
3MRZ X-ray 3.62 5 2-65 [» ]
3MS1 X-ray 3.62 5 2-65 [» ]
3PYO X-ray 3.50 5 2-64 [» ]
3PYR X-ray 3.50 5 2-64 [» ]
3PYT X-ray 3.40 5 2-64 [» ]
3PYV X-ray 3.40 5 2-64 [» ]
4KBU X-ray 3.86 8 2-65 [» ]
4KBW X-ray 3.86 8 2-65 [» ]
4KCZ X-ray 3.50 8 2-65 [» ]
4KD2 X-ray 3.50 8 2-65 [» ]
4KD9 X-ray 3.50 8 2-65 [» ]
4KDB X-ray 3.50 8 2-65 [» ]
4KDH X-ray 4.00 8 2-65 [» ]
4KDK X-ray 4.00 8 2-65 [» ]
4KFI X-ray 3.40 8 2-64 [» ]
4KFL X-ray 3.40 8 2-64 [» ]
4L6J X-ray 3.40 5 2-64 [» ]
4L6L X-ray 3.40 5 2-64 [» ]
4QS1 X-ray 3.80 8 2-65 [» ]
4QS3 X-ray 3.80 8 2-65 [» ]
ProteinModelPortali Q72L77.
SMRi Q72L77. Positions 1-64.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS80532 ; AAS80532 ; TT_C0184 .
GeneIDi 2775180.
KEGGi tth:TTC0184.
PATRICi 23950761. VBITheThe54392_0185.

Phylogenomic databases

eggNOGi COG0291.
KOi K02916.
OMAi RFSITAR.
OrthoDBi EOG651T3B.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-188-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72L77.

Family and domain databases

HAMAPi MF_00514. Ribosomal_L35.
InterProi IPR021137. Ribosomal_L35.
IPR018265. Ribosomal_L35_CS.
IPR001706. Ribosomal_L35_non-mt.
[Graphical view ]
Pfami PF01632. Ribosomal_L35p. 1 hit.
[Graphical view ]
PRINTSi PR00064. RIBOSOMALL35.
TIGRFAMsi TIGR00001. rpmI_bact. 1 hit.
PROSITEi PS00936. RIBOSOMAL_L35. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL35_THET2
AccessioniPrimary (citable) accession number: Q72L77
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: January 23, 2007
Last modified: November 26, 2014
This is version 66 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3