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Q72L76 (RL20_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L20
Gene names
Name:rplT
Ordered Locus Names:TT_C0185
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length118 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. HAMAP-Rule MF_00382

Sequence similarities

Belongs to the ribosomal protein L20P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 11811850S ribosomal protein L20 HAMAP-Rule MF_00382
PRO_0000177249

Secondary structure

.............. 118
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q72L76 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: A5A8B028B15145F7

FASTA11813,743
        10         20         30         40         50         60 
MPRAKTGVVR RRKHKKILKL AKGYWGLRSK SFRKARETLF AAGNYAYAHR KRRKRDFRRL 

        70         80         90        100        110 
WIVRINAACR QHGLNYSTFI HGLKKAGIEV DRKNLADLAV REPQVFAELV ERAKAAQG 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS80533.1.
RefSeqYP_004160.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71O1-118[»]
1VSPX-ray3.83O1-118[»]
3D5BX-ray3.21U1-118[»]
3D5DX-ray3.21U1-118[»]
3F1FX-ray3.00U1-118[»]
3F1HX-ray3.00U1-118[»]
3MRZX-ray3.62Q2-118[»]
3MS1X-ray3.62Q2-118[»]
3PYOX-ray3.50Q2-118[»]
3PYRX-ray3.50Q2-118[»]
3PYTX-ray3.40Q2-118[»]
3PYVX-ray3.40Q2-118[»]
4KBUX-ray3.86U2-118[»]
4KBWX-ray3.86U2-118[»]
4KCZX-ray3.50U2-118[»]
4KD2X-ray3.50U2-118[»]
4KD9X-ray3.50U2-118[»]
4KDBX-ray3.50U2-118[»]
4KDHX-ray4.00U2-118[»]
4KDKX-ray4.00U2-118[»]
4KFIX-ray3.40U2-118[»]
4KFLX-ray3.40U2-118[»]
4L6JX-ray3.40Q2-118[»]
4L6LX-ray3.40Q2-118[»]
ProteinModelPortalQ72L76.
SMRQ72L76. Positions 2-118.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC0185.

Proteomic databases

PRIDEQ72L76.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS80533; AAS80533; TT_C0185.
GeneID2774485.
KEGGtth:TTC0185.
PATRIC23950763. VBITheThe54392_0186.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0292.
KOK02887.
OMAGRRKNVW.
OrthoDBEOG6CGCMB.
ProtClustDBPRK05185.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-189-MONOMER.

Family and domain databases

HAMAPMF_00382. Ribosomal_L20.
InterProIPR005813. Ribosomal_L20.
[Graphical view]
PANTHERPTHR10986. PTHR10986. 1 hit.
PfamPF00453. Ribosomal_L20. 1 hit.
[Graphical view]
PRINTSPR00062. RIBOSOMALL20.
TIGRFAMsTIGR01032. rplT_bact. 1 hit.
PROSITEPS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ72L76.

Entry information

Entry nameRL20_THET2
AccessionPrimary (citable) accession number: Q72L76
Entry history
Integrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references