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Q72L76

- RL20_THET2

UniProt

Q72L76 - RL20_THET2

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Protein

50S ribosomal protein L20

Gene
rplT, TT_C0185
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-KW
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-189-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L20
Gene namesi
Name:rplT
Ordered Locus Names:TT_C0185
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11811850S ribosomal protein L20UniRule annotationPRO_0000177249Add
BLAST

Proteomic databases

PRIDEiQ72L76.

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC0185.

Structurei

Secondary structure

1
118
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi9 – 2012
Turni21 – 233
Helixi26 – 294
Helixi32 – 7241
Helixi76 – 8510
Helixi93 – 997
Helixi103 – 11715

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71O1-118[»]
1VSPX-ray3.83O1-118[»]
3D5BX-ray3.21U1-118[»]
3D5DX-ray3.21U1-118[»]
3F1FX-ray3.00U1-118[»]
3F1HX-ray3.00U1-118[»]
3MRZX-ray3.62Q2-118[»]
3MS1X-ray3.62Q2-118[»]
3PYOX-ray3.50Q2-118[»]
3PYRX-ray3.50Q2-118[»]
3PYTX-ray3.40Q2-118[»]
3PYVX-ray3.40Q2-118[»]
4KBUX-ray3.86U2-118[»]
4KBWX-ray3.86U2-118[»]
4KCZX-ray3.50U2-118[»]
4KD2X-ray3.50U2-118[»]
4KD9X-ray3.50U2-118[»]
4KDBX-ray3.50U2-118[»]
4KDHX-ray4.00U2-118[»]
4KDKX-ray4.00U2-118[»]
4KFIX-ray3.40U2-118[»]
4KFLX-ray3.40U2-118[»]
4L6JX-ray3.40Q2-118[»]
4L6LX-ray3.40Q2-118[»]
ProteinModelPortaliQ72L76.
SMRiQ72L76. Positions 2-118.

Miscellaneous databases

EvolutionaryTraceiQ72L76.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0292.
KOiK02887.
OMAiLECDRIS.
OrthoDBiEOG6CGCMB.

Family and domain databases

HAMAPiMF_00382. Ribosomal_L20.
InterProiIPR005813. Ribosomal_L20.
[Graphical view]
PANTHERiPTHR10986. PTHR10986. 1 hit.
PfamiPF00453. Ribosomal_L20. 1 hit.
[Graphical view]
PRINTSiPR00062. RIBOSOMALL20.
TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
PROSITEiPS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72L76-1 [UniParc]FASTAAdd to Basket

« Hide

MPRAKTGVVR RRKHKKILKL AKGYWGLRSK SFRKARETLF AAGNYAYAHR    50
KRRKRDFRRL WIVRINAACR QHGLNYSTFI HGLKKAGIEV DRKNLADLAV 100
REPQVFAELV ERAKAAQG 118
Length:118
Mass (Da):13,743
Last modified:July 5, 2004 - v1
Checksum:iA5A8B028B15145F7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS80533.1.
RefSeqiYP_004160.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS80533; AAS80533; TT_C0185.
GeneIDi2774485.
KEGGitth:TTC0185.
PATRICi23950763. VBITheThe54392_0186.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS80533.1 .
RefSeqi YP_004160.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 O 1-118 [» ]
1VSP X-ray 3.83 O 1-118 [» ]
3D5B X-ray 3.21 U 1-118 [» ]
3D5D X-ray 3.21 U 1-118 [» ]
3F1F X-ray 3.00 U 1-118 [» ]
3F1H X-ray 3.00 U 1-118 [» ]
3MRZ X-ray 3.62 Q 2-118 [» ]
3MS1 X-ray 3.62 Q 2-118 [» ]
3PYO X-ray 3.50 Q 2-118 [» ]
3PYR X-ray 3.50 Q 2-118 [» ]
3PYT X-ray 3.40 Q 2-118 [» ]
3PYV X-ray 3.40 Q 2-118 [» ]
4KBU X-ray 3.86 U 2-118 [» ]
4KBW X-ray 3.86 U 2-118 [» ]
4KCZ X-ray 3.50 U 2-118 [» ]
4KD2 X-ray 3.50 U 2-118 [» ]
4KD9 X-ray 3.50 U 2-118 [» ]
4KDB X-ray 3.50 U 2-118 [» ]
4KDH X-ray 4.00 U 2-118 [» ]
4KDK X-ray 4.00 U 2-118 [» ]
4KFI X-ray 3.40 U 2-118 [» ]
4KFL X-ray 3.40 U 2-118 [» ]
4L6J X-ray 3.40 Q 2-118 [» ]
4L6L X-ray 3.40 Q 2-118 [» ]
ProteinModelPortali Q72L76.
SMRi Q72L76. Positions 2-118.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC0185.

Proteomic databases

PRIDEi Q72L76.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS80533 ; AAS80533 ; TT_C0185 .
GeneIDi 2774485.
KEGGi tth:TTC0185.
PATRICi 23950763. VBITheThe54392_0186.

Phylogenomic databases

eggNOGi COG0292.
KOi K02887.
OMAi LECDRIS.
OrthoDBi EOG6CGCMB.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-189-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72L76.

Family and domain databases

HAMAPi MF_00382. Ribosomal_L20.
InterProi IPR005813. Ribosomal_L20.
[Graphical view ]
PANTHERi PTHR10986. PTHR10986. 1 hit.
Pfami PF00453. Ribosomal_L20. 1 hit.
[Graphical view ]
PRINTSi PR00062. RIBOSOMALL20.
TIGRFAMsi TIGR01032. rplT_bact. 1 hit.
PROSITEi PS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL20_THET2
AccessioniPrimary (citable) accession number: Q72L76
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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