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Q72JU9

- RL19_THET2

UniProt

Q72JU9 - RL19_THET2

Protein

50S ribosomal protein L19

Gene

rplS

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.UniRule annotation

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-683-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L19UniRule annotation
    Gene namesi
    Name:rplSUniRule annotation
    Ordered Locus Names:TT_C0669
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 14614650S ribosomal protein L19PRO_0000163557Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi262724.TTC0669.

    Structurei

    Secondary structure

    1
    146
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi4 – 118
    Beta strandi24 – 329
    Beta strandi37 – 404
    Beta strandi44 – 5310
    Beta strandi56 – 583
    Beta strandi60 – 656
    Helixi67 – 693
    Beta strandi72 – 776
    Beta strandi83 – 886
    Beta strandi95 – 984
    Helixi100 – 1056
    Helixi108 – 1114
    Helixi118 – 13619

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1VSAX-ray3.71N1-146[»]
    1VSPX-ray3.83N1-146[»]
    3D5BX-ray3.21T1-146[»]
    3D5DX-ray3.21T1-146[»]
    3F1FX-ray3.00T1-146[»]
    3F1HX-ray3.00T1-146[»]
    3MRZX-ray3.62P1-146[»]
    3MS1X-ray3.62P1-146[»]
    3PYOX-ray3.50P1-137[»]
    3PYRX-ray3.50P1-137[»]
    3PYTX-ray3.40P1-137[»]
    3PYVX-ray3.40P1-137[»]
    4KBUX-ray3.86T1-138[»]
    4KBWX-ray3.86T1-138[»]
    4KCZX-ray3.50T1-138[»]
    4KD2X-ray3.50T1-138[»]
    4KD9X-ray3.50T1-138[»]
    4KDBX-ray3.50T1-138[»]
    4KDHX-ray4.00T1-138[»]
    4KDKX-ray4.00T1-138[»]
    4KFIX-ray3.40T1-137[»]
    4KFLX-ray3.40T1-137[»]
    4L6JX-ray3.40P1-137[»]
    4L6LX-ray3.40P1-137[»]
    ProteinModelPortaliQ72JU9.
    SMRiQ72JU9. Positions 1-137.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ72JU9.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L19P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0335.
    KOiK02884.
    OMAiERIQIFN.
    OrthoDBiEOG6DZF5W.

    Family and domain databases

    HAMAPiMF_00402. Ribosomal_L19.
    InterProiIPR001857. Ribosomal_L19.
    IPR018257. Ribosomal_L19_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view]
    PANTHERiPTHR15680. PTHR15680. 1 hit.
    PfamiPF01245. Ribosomal_L19. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002191. Ribosomal_L19. 1 hit.
    PRINTSiPR00061. RIBOSOMALL19.
    SUPFAMiSSF50104. SSF50104. 1 hit.
    TIGRFAMsiTIGR01024. rplS_bact. 1 hit.
    PROSITEiPS01015. RIBOSOMAL_L19. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q72JU9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNRGALIKLV ESRYVRTDLP EFRPGDTVRV SYKVKEGNRT RIQDFEGIVI    50
    RIRRNGFNTT FTVRKVSYGV GVERIFPLHS PLIQKIDIVQ RGRARRAKLY 100
    FIRNLSDREI RRKLRADRKR IDKDRAAERA AKEEVQKAQE PEASQE 146
    Length:146
    Mass (Da):17,181
    Last modified:July 5, 2004 - v1
    Checksum:iB026C35B0BBAF6B7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81017.1.
    RefSeqiYP_004644.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81017; AAS81017; TT_C0669.
    GeneIDi2774921.
    KEGGitth:TTC0669.
    PATRICi23951743. VBITheThe54392_0666.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81017.1 .
    RefSeqi YP_004644.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1VSA X-ray 3.71 N 1-146 [» ]
    1VSP X-ray 3.83 N 1-146 [» ]
    3D5B X-ray 3.21 T 1-146 [» ]
    3D5D X-ray 3.21 T 1-146 [» ]
    3F1F X-ray 3.00 T 1-146 [» ]
    3F1H X-ray 3.00 T 1-146 [» ]
    3MRZ X-ray 3.62 P 1-146 [» ]
    3MS1 X-ray 3.62 P 1-146 [» ]
    3PYO X-ray 3.50 P 1-137 [» ]
    3PYR X-ray 3.50 P 1-137 [» ]
    3PYT X-ray 3.40 P 1-137 [» ]
    3PYV X-ray 3.40 P 1-137 [» ]
    4KBU X-ray 3.86 T 1-138 [» ]
    4KBW X-ray 3.86 T 1-138 [» ]
    4KCZ X-ray 3.50 T 1-138 [» ]
    4KD2 X-ray 3.50 T 1-138 [» ]
    4KD9 X-ray 3.50 T 1-138 [» ]
    4KDB X-ray 3.50 T 1-138 [» ]
    4KDH X-ray 4.00 T 1-138 [» ]
    4KDK X-ray 4.00 T 1-138 [» ]
    4KFI X-ray 3.40 T 1-137 [» ]
    4KFL X-ray 3.40 T 1-137 [» ]
    4L6J X-ray 3.40 P 1-137 [» ]
    4L6L X-ray 3.40 P 1-137 [» ]
    ProteinModelPortali Q72JU9.
    SMRi Q72JU9. Positions 1-137.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC0669.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81017 ; AAS81017 ; TT_C0669 .
    GeneIDi 2774921.
    KEGGi tth:TTC0669.
    PATRICi 23951743. VBITheThe54392_0666.

    Phylogenomic databases

    eggNOGi COG0335.
    KOi K02884.
    OMAi ERIQIFN.
    OrthoDBi EOG6DZF5W.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-683-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q72JU9.

    Family and domain databases

    HAMAPi MF_00402. Ribosomal_L19.
    InterProi IPR001857. Ribosomal_L19.
    IPR018257. Ribosomal_L19_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view ]
    PANTHERi PTHR15680. PTHR15680. 1 hit.
    Pfami PF01245. Ribosomal_L19. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002191. Ribosomal_L19. 1 hit.
    PRINTSi PR00061. RIBOSOMALL19.
    SUPFAMi SSF50104. SSF50104. 1 hit.
    TIGRFAMsi TIGR01024. rplS_bact. 1 hit.
    PROSITEi PS01015. RIBOSOMAL_L19. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL19_THET2
    AccessioniPrimary (citable) accession number: Q72JU9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 21, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3