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Q72JU9

- RL19_THET2

UniProt

Q72JU9 - RL19_THET2

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Protein
50S ribosomal protein L19
Gene
rplS, TT_C0669
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site By similarity.UniRule annotation

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-683-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L19
Gene namesi
Name:rplS
Ordered Locus Names:TT_C0669
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14614650S ribosomal protein L19UniRule annotation
PRO_0000163557Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC0669.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi4 – 118
Beta strandi24 – 329
Beta strandi37 – 404
Beta strandi44 – 5310
Beta strandi56 – 583
Beta strandi60 – 656
Helixi67 – 693
Beta strandi72 – 776
Beta strandi83 – 886
Beta strandi95 – 984
Helixi100 – 1056
Helixi108 – 1114
Helixi118 – 13619

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71N1-146[»]
1VSPX-ray3.83N1-146[»]
3D5BX-ray3.21T1-146[»]
3D5DX-ray3.21T1-146[»]
3F1FX-ray3.00T1-146[»]
3F1HX-ray3.00T1-146[»]
3MRZX-ray3.62P1-146[»]
3MS1X-ray3.62P1-146[»]
3PYOX-ray3.50P1-137[»]
3PYRX-ray3.50P1-137[»]
3PYTX-ray3.40P1-137[»]
3PYVX-ray3.40P1-137[»]
4KBUX-ray3.86T1-138[»]
4KBWX-ray3.86T1-138[»]
4KCZX-ray3.50T1-138[»]
4KD2X-ray3.50T1-138[»]
4KD9X-ray3.50T1-138[»]
4KDBX-ray3.50T1-138[»]
4KDHX-ray4.00T1-138[»]
4KDKX-ray4.00T1-138[»]
4KFIX-ray3.40T1-137[»]
4KFLX-ray3.40T1-137[»]
4L6JX-ray3.40P1-137[»]
4L6LX-ray3.40P1-137[»]
ProteinModelPortaliQ72JU9.
SMRiQ72JU9. Positions 1-137.

Miscellaneous databases

EvolutionaryTraceiQ72JU9.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0335.
KOiK02884.
OMAiERIQIFN.
OrthoDBiEOG6DZF5W.

Family and domain databases

HAMAPiMF_00402. Ribosomal_L19.
InterProiIPR001857. Ribosomal_L19.
IPR018257. Ribosomal_L19_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR15680. PTHR15680. 1 hit.
PfamiPF01245. Ribosomal_L19. 1 hit.
[Graphical view]
PIRSFiPIRSF002191. Ribosomal_L19. 1 hit.
PRINTSiPR00061. RIBOSOMALL19.
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01024. rplS_bact. 1 hit.
PROSITEiPS01015. RIBOSOMAL_L19. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72JU9-1 [UniParc]FASTAAdd to Basket

« Hide

MNRGALIKLV ESRYVRTDLP EFRPGDTVRV SYKVKEGNRT RIQDFEGIVI    50
RIRRNGFNTT FTVRKVSYGV GVERIFPLHS PLIQKIDIVQ RGRARRAKLY 100
FIRNLSDREI RRKLRADRKR IDKDRAAERA AKEEVQKAQE PEASQE 146
Length:146
Mass (Da):17,181
Last modified:July 5, 2004 - v1
Checksum:iB026C35B0BBAF6B7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81017.1.
RefSeqiYP_004644.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81017; AAS81017; TT_C0669.
GeneIDi2774921.
KEGGitth:TTC0669.
PATRICi23951743. VBITheThe54392_0666.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81017.1 .
RefSeqi YP_004644.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 N 1-146 [» ]
1VSP X-ray 3.83 N 1-146 [» ]
3D5B X-ray 3.21 T 1-146 [» ]
3D5D X-ray 3.21 T 1-146 [» ]
3F1F X-ray 3.00 T 1-146 [» ]
3F1H X-ray 3.00 T 1-146 [» ]
3MRZ X-ray 3.62 P 1-146 [» ]
3MS1 X-ray 3.62 P 1-146 [» ]
3PYO X-ray 3.50 P 1-137 [» ]
3PYR X-ray 3.50 P 1-137 [» ]
3PYT X-ray 3.40 P 1-137 [» ]
3PYV X-ray 3.40 P 1-137 [» ]
4KBU X-ray 3.86 T 1-138 [» ]
4KBW X-ray 3.86 T 1-138 [» ]
4KCZ X-ray 3.50 T 1-138 [» ]
4KD2 X-ray 3.50 T 1-138 [» ]
4KD9 X-ray 3.50 T 1-138 [» ]
4KDB X-ray 3.50 T 1-138 [» ]
4KDH X-ray 4.00 T 1-138 [» ]
4KDK X-ray 4.00 T 1-138 [» ]
4KFI X-ray 3.40 T 1-137 [» ]
4KFL X-ray 3.40 T 1-137 [» ]
4L6J X-ray 3.40 P 1-137 [» ]
4L6L X-ray 3.40 P 1-137 [» ]
ProteinModelPortali Q72JU9.
SMRi Q72JU9. Positions 1-137.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC0669.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81017 ; AAS81017 ; TT_C0669 .
GeneIDi 2774921.
KEGGi tth:TTC0669.
PATRICi 23951743. VBITheThe54392_0666.

Phylogenomic databases

eggNOGi COG0335.
KOi K02884.
OMAi ERIQIFN.
OrthoDBi EOG6DZF5W.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-683-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72JU9.

Family and domain databases

HAMAPi MF_00402. Ribosomal_L19.
InterProi IPR001857. Ribosomal_L19.
IPR018257. Ribosomal_L19_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view ]
PANTHERi PTHR15680. PTHR15680. 1 hit.
Pfami PF01245. Ribosomal_L19. 1 hit.
[Graphical view ]
PIRSFi PIRSF002191. Ribosomal_L19. 1 hit.
PRINTSi PR00061. RIBOSOMALL19.
SUPFAMi SSF50104. SSF50104. 1 hit.
TIGRFAMsi TIGR01024. rplS_bact. 1 hit.
PROSITEi PS01015. RIBOSOMAL_L19. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL19_THET2
AccessioniPrimary (citable) accession number: Q72JU9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 21, 2004
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi