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Q72JR0 (RL31_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L31
Gene names
Name:rpmE
Ordered Locus Names:TT_C0708
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length71 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Binds the 23S rRNA By similarity. HAMAP-Rule MF_00501

Cofactor

Binds 1 zinc ion per subunit By similarity. HAMAP-Rule MF_00501

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_00501

Sequence similarities

Belongs to the ribosomal protein L31P family. Type A subfamily.

Sequence caution

The sequence AAS81056.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   LigandMetal-binding
RNA-binding
rRNA-binding
Zinc
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

rRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 717150S ribosomal protein L31 HAMAP-Rule MF_00501
PRO_0000173170

Sites

Metal binding161Zinc By similarity
Metal binding181Zinc By similarity
Metal binding361Zinc By similarity
Metal binding391Zinc By similarity

Secondary structure

........... 71
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q72JR0 [UniParc].

Last modified August 16, 2005. Version 2.
Checksum: 1172052DBDBA687A

FASTA718,286
        10         20         30         40         50         60 
MKEGIHPKLV PARIICGCGN VIETYSTKPE IYVEVCSKCH PFYTGQQRFV DTEGRVERFQ 

        70 
RRYGDSYRKG R 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS81056.1. Different initiation.
RefSeqYP_004683.2. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3D5BX-ray3.2142-71[»]
3D5DX-ray3.2142-71[»]
3F1FX-ray3.0042-71[»]
3F1HX-ray3.0042-71[»]
3MRZX-ray3.6211-71[»]
3MS1X-ray3.6211-71[»]
3PYOX-ray3.50110-39[»]
3PYRX-ray3.50110-39[»]
3PYTX-ray3.40110-39[»]
3PYVX-ray3.40110-39[»]
4KBUX-ray3.8641-35[»]
4KBWX-ray3.8641-35[»]
4KCZX-ray3.5041-35[»]
4KD2X-ray3.5041-35[»]
4KD9X-ray3.5041-35[»]
4KDBX-ray3.5041-35[»]
4KDHX-ray4.0041-35[»]
4KDKX-ray4.0041-35[»]
4KFIX-ray3.40410-39[»]
4KFLX-ray3.40410-39[»]
4L6JX-ray3.40110-39[»]
4L6LX-ray3.40110-39[»]
ProteinModelPortalQ72JR0.
SMRQ72JR0. Positions 1-71.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC0708.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS81056; AAS81056; TT_C0708.
GeneID2775658.
KEGGtth:TTC0708.
PATRIC23951821. VBITheThe54392_0705.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0254.
KOK02909.
OMACACGETF.
OrthoDBEOG6DVJZM.
ProtClustDBPRK00019.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-722-MONOMER.

Family and domain databases

HAMAPMF_00501. Ribosomal_L31_1.
InterProIPR002150. Ribosomal_L31.
IPR027491. Ribosomal_L31_A.
[Graphical view]
PfamPF01197. Ribosomal_L31. 1 hit.
[Graphical view]
PRINTSPR01249. RIBOSOMALL31.
TIGRFAMsTIGR00105. L31. 1 hit.
PROSITEPS01143. RIBOSOMAL_L31. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ72JR0.

Entry information

Entry nameRL31_THET2
AccessionPrimary (citable) accession number: Q72JR0
Entry history
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: August 16, 2005
Last modified: February 19, 2014
This is version 59 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references