Glutamate dehydrogenase - Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)

Contribute

Read comments (?) or add your own

Q72IC1 (Q72IC1_THET2) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 50. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

text xml rdf/xml gff fasta

to top of page

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

to top of page

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Ordered Locus Names:

TT_C1211

Organism

Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus

Protein attributes

Sequence length	424 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004418 PIRNR PIRNR000185 EMBL AAS81553.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Active site

1

By similarity PIRSR PIRSR000185-1

Sequences

Sequence

Length

Mass (Da)

Tools

Q72IC1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: A24D0F7C46704797
Show »

424

46,113

        10         20         30         40         50         60 
MKSEPLSYLG KDGGPWEIFT EQVDRVVPYL GRLAPLAESL KRPKRVLIVD VPVRLDDGSV 

        70         80         90        100        110        120 
AYFEGYRVHH NTARGPAKGG VRYHPEVTLS EVMALAGWMT IKNAAVGLPY GGGKGGIRVD 

       130        140        150        160        170        180 
PRKLSPGELE RLTRRYTSEI GILLGPDRDI PAPDVNTGER EMAWMMDTYS MNVGRTVPGV 

       190        200        210        220        230        240 
VTGKPIALGG SLGRRDATGR GVFITAAAAA EKIGLQVEGA RVAIQGFGNV GNAAARAFHD 

       250        260        270        280        290        300 
HGARVVAVQD HTGTVYNEAG IDPYDLLRHV QEFGGVRGYP KAEPLPAADF WGLPVEFLVP 

       310        320        330        340        350        360 
AALEKQITEQ NAWRIRARIV AEGANGPTTP AADDILLEKG VLVVPDVIAN AGGVTVSYFE 

       370        380        390        400        410        420 
WVQDFNSYFW TEEEINARLE RVLRNAFEAV WQVAQEKKIP LRTAAYVVAA TRVLEARALR 


GLYP

References

[1]

"The genome sequence of the extreme thermophile Thermus thermophilus."
Henne A., Brueggemann H., Raasch C., Wiezer A., Hartsch T., Liesegang H., Johann A., Lienard T., Gohl O., Martinez-Arias R., Jacobi C., Starkuviene V., Schlenczeck S., Dencker S., Huber R., Klenk H.-P., Kramer W., Merkl R., Gottschalk G., Fritz H.-J.
Nat. Biotechnol. 22:547-553(2004) [PubMed: 15064768] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE017221 Genomic DNA. Translation: AAS81553.1.

RefSeq

YP_005180.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3AOE	X-ray	2.60	A/B	1-424	[»]
3AOG	X-ray	2.10	A/B/C/D/E/F/G/H/I/J/K/L	1-424	[»]

ProteinModelPortal

SMR

Q72IC1. Positions 15-421.

ModBase

Protein-protein interaction databases

STRING

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

GeneID

GenomeReviews

Gene locus TT_C1211 in contig AE017221_GR.

PATRIC

23952831. VBITheThe54392_1204.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

HOGENOM

OMA

PhylomeDB

ProtClustDB

Enzyme and pathway databases

BioCyc

TTHE262724:TT_C1211-MONOMER.

Family and domain databases

InterPro

IPR006095. Glu/Leu/Phe/Val_DH.
IPR006096. Glu/Leu/Phe/Val_DH_C.
IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom.
IPR014362. Glu_DH.
IPR016040. NAD(P)-bd_dom.
[Graphical view]

Gene3D

G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.

Pfam

PF00208. ELFV_dehydrog. 1 hit.
PF02812. ELFV_dehydrog_N. 1 hit.
[Graphical view]

PIRSF

PIRSF000185. Glu_DH. 1 hit.

PRINTS

PR00082. GLFDHDRGNASE.

SMART

SM00839. ELFV_dehydrog. 1 hit.
[Graphical view]

PROSITE

PS00074. GLFV_DEHYDROGENASE. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

Q72IC1_THET2

Accession

Primary (citable) accession number: Q72IC1

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

to top of page

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info