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Q72I33

- RL17_THET2

UniProt

Q72I33 - RL17_THET2

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Protein

50S ribosomal protein L17

Gene

rplQ

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1314-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L17UniRule annotation
Gene namesi
Name:rplQUniRule annotation
Ordered Locus Names:TT_C1299
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11811850S ribosomal protein L17PRO_0000267959Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L32.UniRule annotation

Protein-protein interaction databases

STRINGi262724.TTC1299.

Structurei

Secondary structure

1
118
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi14 – 3118
Beta strandi32 – 376
Helixi38 – 5619
Helixi60 – 6910
Helixi73 – 808
Helixi83 – 875
Beta strandi95 – 1039
Turni105 – 1073
Beta strandi110 – 1167

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71L1-118[»]
1VSPX-ray3.83L1-118[»]
3D5BX-ray3.21R1-118[»]
3D5DX-ray3.21R1-118[»]
3F1FX-ray3.00R1-118[»]
3F1HX-ray3.00R1-118[»]
3MRZX-ray3.62N2-118[»]
3MS1X-ray3.62N2-118[»]
3PYOX-ray3.50N2-118[»]
3PYRX-ray3.50N2-118[»]
3PYTX-ray3.40N2-118[»]
3PYVX-ray3.40N2-118[»]
4KBUX-ray3.86R2-118[»]
4KBWX-ray3.86R2-118[»]
4KCZX-ray3.50R2-118[»]
4KD2X-ray3.50R2-118[»]
4KD9X-ray3.50R2-118[»]
4KDBX-ray3.50R2-118[»]
4KDHX-ray4.00R2-118[»]
4KDKX-ray4.00R2-118[»]
4KFIX-ray3.40R2-118[»]
4KFLX-ray3.40R2-118[»]
4L6JX-ray3.40N2-118[»]
4L6LX-ray3.40N2-118[»]
ProteinModelPortaliQ72I33.
SMRiQ72I33. Positions 1-118.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72I33.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L17P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0203.
KOiK02879.
OMAiIADKMVT.
OrthoDBiEOG6GR3GR.

Family and domain databases

Gene3Di3.90.1030.10. 1 hit.
HAMAPiMF_01368. Ribosomal_L17.
InterProiIPR000456. Ribosomal_L17.
[Graphical view]
PANTHERiPTHR14413. PTHR14413. 1 hit.
PfamiPF01196. Ribosomal_L17. 1 hit.
[Graphical view]
SUPFAMiSSF64263. SSF64263. 1 hit.
TIGRFAMsiTIGR00059. L17. 1 hit.

Sequencei

Sequence statusi: Complete.

Q72I33-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRHLKSGRKL NRHSSHRLAL YRNQAKSLLT HGRITTTVPK AKELRGFVDH
60 70 80 90 100
LIHLAKRGDL HARRLVLRDL QDVKLVRKLF DEIAPRYRDR QGGYTRVLKL
110
AERRRGDGAP LALVELVE
Length:118
Mass (Da):13,715
Last modified:July 5, 2004 - v1
Checksum:iC9B8DD552F6C42AF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81641.1.
RefSeqiYP_005268.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81641; AAS81641; TT_C1299.
GeneIDi2774911.
KEGGitth:TTC1299.
PATRICi23953005. VBITheThe54392_1291.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81641.1 .
RefSeqi YP_005268.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 L 1-118 [» ]
1VSP X-ray 3.83 L 1-118 [» ]
3D5B X-ray 3.21 R 1-118 [» ]
3D5D X-ray 3.21 R 1-118 [» ]
3F1F X-ray 3.00 R 1-118 [» ]
3F1H X-ray 3.00 R 1-118 [» ]
3MRZ X-ray 3.62 N 2-118 [» ]
3MS1 X-ray 3.62 N 2-118 [» ]
3PYO X-ray 3.50 N 2-118 [» ]
3PYR X-ray 3.50 N 2-118 [» ]
3PYT X-ray 3.40 N 2-118 [» ]
3PYV X-ray 3.40 N 2-118 [» ]
4KBU X-ray 3.86 R 2-118 [» ]
4KBW X-ray 3.86 R 2-118 [» ]
4KCZ X-ray 3.50 R 2-118 [» ]
4KD2 X-ray 3.50 R 2-118 [» ]
4KD9 X-ray 3.50 R 2-118 [» ]
4KDB X-ray 3.50 R 2-118 [» ]
4KDH X-ray 4.00 R 2-118 [» ]
4KDK X-ray 4.00 R 2-118 [» ]
4KFI X-ray 3.40 R 2-118 [» ]
4KFL X-ray 3.40 R 2-118 [» ]
4L6J X-ray 3.40 N 2-118 [» ]
4L6L X-ray 3.40 N 2-118 [» ]
ProteinModelPortali Q72I33.
SMRi Q72I33. Positions 1-118.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC1299.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81641 ; AAS81641 ; TT_C1299 .
GeneIDi 2774911.
KEGGi tth:TTC1299.
PATRICi 23953005. VBITheThe54392_1291.

Phylogenomic databases

eggNOGi COG0203.
KOi K02879.
OMAi IADKMVT.
OrthoDBi EOG6GR3GR.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1314-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72I33.

Family and domain databases

Gene3Di 3.90.1030.10. 1 hit.
HAMAPi MF_01368. Ribosomal_L17.
InterProi IPR000456. Ribosomal_L17.
[Graphical view ]
PANTHERi PTHR14413. PTHR14413. 1 hit.
Pfami PF01196. Ribosomal_L17. 1 hit.
[Graphical view ]
SUPFAMi SSF64263. SSF64263. 1 hit.
TIGRFAMsi TIGR00059. L17. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL17_THET2
AccessioniPrimary (citable) accession number: Q72I33
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 5, 2004
Last modified: October 1, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3