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Protein

50S ribosomal protein L17

Gene

rplQ

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1314-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L17UniRule annotation
Gene namesi
Name:rplQUniRule annotation
Ordered Locus Names:TT_C1299
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11811850S ribosomal protein L17PRO_0000267959Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L32.UniRule annotation

Protein-protein interaction databases

STRINGi262724.TTC1299.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V4IX-ray3.71L1-118[»]
4V4JX-ray3.83L1-118[»]
4V63X-ray3.21BR/DR1-118[»]
4V67X-ray3.00BR/DR1-118[»]
4V7PX-ray3.62BN/CN2-118[»]
4V83X-ray3.50BN/DN2-118[»]
4V84X-ray3.40BN/DN2-118[»]
4V9JX-ray3.86BR/DR2-118[»]
4V9KX-ray3.50BR/DR2-118[»]
4V9LX-ray3.50BR/DR2-118[»]
4V9MX-ray4.00BR/DR2-118[»]
4V9NX-ray3.40BR/DR2-118[»]
4V9QX-ray3.40AN/CN2-118[»]
4W29X-ray3.80BR/DR2-118[»]
4XEJX-ray3.80AL17/BL172-118[»]
ProteinModelPortaliQ72I33.
SMRiQ72I33. Positions 1-118.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72I33.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L17P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108ZT0. Bacteria.
COG0203. LUCA.
KOiK02879.
OMAiKTVQRRG.
OrthoDBiEOG6GR3GR.

Family and domain databases

Gene3Di3.90.1030.10. 1 hit.
HAMAPiMF_01368. Ribosomal_L17.
InterProiIPR000456. Ribosomal_L17.
[Graphical view]
PANTHERiPTHR14413. PTHR14413. 1 hit.
PfamiPF01196. Ribosomal_L17. 1 hit.
[Graphical view]
SUPFAMiSSF64263. SSF64263. 1 hit.
TIGRFAMsiTIGR00059. L17. 1 hit.

Sequencei

Sequence statusi: Complete.

Q72I33-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRHLKSGRKL NRHSSHRLAL YRNQAKSLLT HGRITTTVPK AKELRGFVDH
60 70 80 90 100
LIHLAKRGDL HARRLVLRDL QDVKLVRKLF DEIAPRYRDR QGGYTRVLKL
110
AERRRGDGAP LALVELVE
Length:118
Mass (Da):13,715
Last modified:July 5, 2004 - v1
Checksum:iC9B8DD552F6C42AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81641.1.
RefSeqiWP_008633358.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81641; AAS81641; TT_C1299.
KEGGitth:TTC1299.
PATRICi23953005. VBITheThe54392_1291.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81641.1.
RefSeqiWP_008633358.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V4IX-ray3.71L1-118[»]
4V4JX-ray3.83L1-118[»]
4V63X-ray3.21BR/DR1-118[»]
4V67X-ray3.00BR/DR1-118[»]
4V7PX-ray3.62BN/CN2-118[»]
4V83X-ray3.50BN/DN2-118[»]
4V84X-ray3.40BN/DN2-118[»]
4V9JX-ray3.86BR/DR2-118[»]
4V9KX-ray3.50BR/DR2-118[»]
4V9LX-ray3.50BR/DR2-118[»]
4V9MX-ray4.00BR/DR2-118[»]
4V9NX-ray3.40BR/DR2-118[»]
4V9QX-ray3.40AN/CN2-118[»]
4W29X-ray3.80BR/DR2-118[»]
4XEJX-ray3.80AL17/BL172-118[»]
ProteinModelPortaliQ72I33.
SMRiQ72I33. Positions 1-118.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262724.TTC1299.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS81641; AAS81641; TT_C1299.
KEGGitth:TTC1299.
PATRICi23953005. VBITheThe54392_1291.

Phylogenomic databases

eggNOGiENOG4108ZT0. Bacteria.
COG0203. LUCA.
KOiK02879.
OMAiKTVQRRG.
OrthoDBiEOG6GR3GR.

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1314-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ72I33.

Family and domain databases

Gene3Di3.90.1030.10. 1 hit.
HAMAPiMF_01368. Ribosomal_L17.
InterProiIPR000456. Ribosomal_L17.
[Graphical view]
PANTHERiPTHR14413. PTHR14413. 1 hit.
PfamiPF01196. Ribosomal_L17. 1 hit.
[Graphical view]
SUPFAMiSSF64263. SSF64263. 1 hit.
TIGRFAMsiTIGR00059. L17. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL17_THET2
AccessioniPrimary (citable) accession number: Q72I33
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 5, 2004
Last modified: November 11, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.