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Q72I28

- RL36_THET2

UniProt

Q72I28 - RL36_THET2

Protein

50S ribosomal protein L36

Gene

rpmJ

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1319-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L36UniRule annotation
    Gene namesi
    Name:rpmJUniRule annotation
    Ordered Locus Names:TT_C1304
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 373750S ribosomal protein L36PRO_0000126283Add
    BLAST

    Structurei

    Secondary structure

    1
    37
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi3 – 64
    Beta strandi11 – 133
    Beta strandi16 – 194
    Beta strandi22 – 254
    Helixi30 – 323
    Beta strandi34 – 363

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1VSAX-ray3.71b1-37[»]
    1VSPX-ray3.83b1-37[»]
    4KBUX-ray3.8691-37[»]
    4KBWX-ray3.8691-37[»]
    4KCZX-ray3.5091-37[»]
    4KD2X-ray3.5091-37[»]
    4KD9X-ray3.5091-37[»]
    4KDBX-ray3.5091-37[»]
    4KDHX-ray4.0091-37[»]
    4KDKX-ray4.0091-37[»]
    ProteinModelPortaliQ72I28.
    SMRiQ72I28. Positions 1-37.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ72I28.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L36P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0257.
    KOiK02919.
    OMAiCHMCTEC.
    OrthoDBiEOG676ZC2.

    Family and domain databases

    HAMAPiMF_00251. Ribosomal_L36.
    InterProiIPR000473. Ribosomal_L36.
    [Graphical view]
    PANTHERiPTHR18804. PTHR18804. 1 hit.
    PfamiPF00444. Ribosomal_L36. 1 hit.
    [Graphical view]
    SUPFAMiSSF57840. SSF57840. 1 hit.
    TIGRFAMsiTIGR01022. rpmJ_bact. 1 hit.
    PROSITEiPS00828. RIBOSOMAL_L36. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q72I28-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKVRASVKRI CDKCKVIRRH GRVYVICENP KHKQRQG                 37
    Length:37
    Mass (Da):4,421
    Last modified:July 5, 2004 - v1
    Checksum:i439072E1737E2AE8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81646.1.
    RefSeqiYP_005273.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81646; AAS81646; TT_C1304.
    GeneIDi2775897.
    KEGGitth:TTC1304.
    PATRICi23953015. VBITheThe54392_1296.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81646.1 .
    RefSeqi YP_005273.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1VSA X-ray 3.71 b 1-37 [» ]
    1VSP X-ray 3.83 b 1-37 [» ]
    4KBU X-ray 3.86 9 1-37 [» ]
    4KBW X-ray 3.86 9 1-37 [» ]
    4KCZ X-ray 3.50 9 1-37 [» ]
    4KD2 X-ray 3.50 9 1-37 [» ]
    4KD9 X-ray 3.50 9 1-37 [» ]
    4KDB X-ray 3.50 9 1-37 [» ]
    4KDH X-ray 4.00 9 1-37 [» ]
    4KDK X-ray 4.00 9 1-37 [» ]
    ProteinModelPortali Q72I28.
    SMRi Q72I28. Positions 1-37.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81646 ; AAS81646 ; TT_C1304 .
    GeneIDi 2775897.
    KEGGi tth:TTC1304.
    PATRICi 23953015. VBITheThe54392_1296.

    Phylogenomic databases

    eggNOGi COG0257.
    KOi K02919.
    OMAi CHMCTEC.
    OrthoDBi EOG676ZC2.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1319-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q72I28.

    Family and domain databases

    HAMAPi MF_00251. Ribosomal_L36.
    InterProi IPR000473. Ribosomal_L36.
    [Graphical view ]
    PANTHERi PTHR18804. PTHR18804. 1 hit.
    Pfami PF00444. Ribosomal_L36. 1 hit.
    [Graphical view ]
    SUPFAMi SSF57840. SSF57840. 1 hit.
    TIGRFAMsi TIGR01022. rpmJ_bact. 1 hit.
    PROSITEi PS00828. RIBOSOMAL_L36. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL36_THET2
    AccessioniPrimary (citable) accession number: Q72I28
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 15, 2005
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3