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Q72I28

- RL36_THET2

UniProt

Q72I28 - RL36_THET2

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Protein
50S ribosomal protein L36
Gene
rpmJ, TT_C1304
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1319-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L36
Gene namesi
Name:rpmJ
Ordered Locus Names:TT_C1304
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 373750S ribosomal protein L36UniRule annotation
PRO_0000126283Add
BLAST

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi3 – 64
Beta strandi11 – 133
Beta strandi16 – 194
Beta strandi22 – 254
Helixi30 – 323
Beta strandi34 – 363

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71b1-37[»]
1VSPX-ray3.83b1-37[»]
4KBUX-ray3.8691-37[»]
4KBWX-ray3.8691-37[»]
4KCZX-ray3.5091-37[»]
4KD2X-ray3.5091-37[»]
4KD9X-ray3.5091-37[»]
4KDBX-ray3.5091-37[»]
4KDHX-ray4.0091-37[»]
4KDKX-ray4.0091-37[»]
ProteinModelPortaliQ72I28.
SMRiQ72I28. Positions 1-37.

Miscellaneous databases

EvolutionaryTraceiQ72I28.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0257.
KOiK02919.
OMAiCHMCTEC.
OrthoDBiEOG676ZC2.

Family and domain databases

HAMAPiMF_00251. Ribosomal_L36.
InterProiIPR000473. Ribosomal_L36.
[Graphical view]
PANTHERiPTHR18804. PTHR18804. 1 hit.
PfamiPF00444. Ribosomal_L36. 1 hit.
[Graphical view]
SUPFAMiSSF57840. SSF57840. 1 hit.
TIGRFAMsiTIGR01022. rpmJ_bact. 1 hit.
PROSITEiPS00828. RIBOSOMAL_L36. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72I28-1 [UniParc]FASTAAdd to Basket

« Hide

MKVRASVKRI CDKCKVIRRH GRVYVICENP KHKQRQG                 37
Length:37
Mass (Da):4,421
Last modified:July 5, 2004 - v1
Checksum:i439072E1737E2AE8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81646.1.
RefSeqiYP_005273.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81646; AAS81646; TT_C1304.
GeneIDi2775897.
KEGGitth:TTC1304.
PATRICi23953015. VBITheThe54392_1296.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81646.1 .
RefSeqi YP_005273.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 b 1-37 [» ]
1VSP X-ray 3.83 b 1-37 [» ]
4KBU X-ray 3.86 9 1-37 [» ]
4KBW X-ray 3.86 9 1-37 [» ]
4KCZ X-ray 3.50 9 1-37 [» ]
4KD2 X-ray 3.50 9 1-37 [» ]
4KD9 X-ray 3.50 9 1-37 [» ]
4KDB X-ray 3.50 9 1-37 [» ]
4KDH X-ray 4.00 9 1-37 [» ]
4KDK X-ray 4.00 9 1-37 [» ]
ProteinModelPortali Q72I28.
SMRi Q72I28. Positions 1-37.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81646 ; AAS81646 ; TT_C1304 .
GeneIDi 2775897.
KEGGi tth:TTC1304.
PATRICi 23953015. VBITheThe54392_1296.

Phylogenomic databases

eggNOGi COG0257.
KOi K02919.
OMAi CHMCTEC.
OrthoDBi EOG676ZC2.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1319-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72I28.

Family and domain databases

HAMAPi MF_00251. Ribosomal_L36.
InterProi IPR000473. Ribosomal_L36.
[Graphical view ]
PANTHERi PTHR18804. PTHR18804. 1 hit.
Pfami PF00444. Ribosomal_L36. 1 hit.
[Graphical view ]
SUPFAMi SSF57840. SSF57840. 1 hit.
TIGRFAMsi TIGR01022. rpmJ_bact. 1 hit.
PROSITEi PS00828. RIBOSOMAL_L36. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL36_THET2
AccessioniPrimary (citable) accession number: Q72I28
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 15, 2005
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi