Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q72I23

- RL15_THET2

UniProt

Q72I23 - RL15_THET2

Protein

50S ribosomal protein L15

Gene

rplO

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Binds to the 23S rRNA.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1324-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L15UniRule annotation
    Gene namesi
    Name:rplOUniRule annotation
    Ordered Locus Names:TT_C1309
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 15015050S ribosomal protein L15PRO_0000104845Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.

    Structurei

    Secondary structure

    1
    150
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi7 – 93
    Beta strandi24 – 296
    Turni31 – 333
    Beta strandi37 – 404
    Beta strandi49 – 513
    Beta strandi53 – 553
    Turni57 – 604
    Beta strandi80 – 845
    Helixi85 – 895
    Beta strandi93 – 953
    Helixi97 – 1015
    Turni102 – 1043
    Beta strandi111 – 1188
    Beta strandi122 – 1254
    Beta strandi128 – 1303
    Helixi132 – 1398
    Beta strandi141 – 1433

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1VSAX-ray3.71J1-150[»]
    1VSPX-ray3.83J1-150[»]
    3D5BX-ray3.21P1-150[»]
    3D5DX-ray3.21P1-150[»]
    3F1FX-ray3.00P1-150[»]
    3F1HX-ray3.00P1-150[»]
    3MRZX-ray3.62L1-150[»]
    3MS1X-ray3.62L1-150[»]
    3PYOX-ray3.50L5-150[»]
    3PYRX-ray3.50L5-150[»]
    3PYTX-ray3.40L5-150[»]
    3PYVX-ray3.40L5-150[»]
    4KBUX-ray3.86P5-150[»]
    4KBWX-ray3.86P5-150[»]
    4KCZX-ray3.50P5-150[»]
    4KD2X-ray3.50P5-150[»]
    4KD9X-ray3.50P5-150[»]
    4KDBX-ray3.50P5-150[»]
    4KDHX-ray4.00P5-150[»]
    4KDKX-ray4.00P5-150[»]
    4KFIX-ray3.40P5-150[»]
    4KFLX-ray3.40P5-150[»]
    4L6JX-ray3.40L5-150[»]
    4L6LX-ray3.40L5-150[»]
    ProteinModelPortaliQ72I23.
    SMRiQ72I23. Positions 5-150.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ72I23.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L15P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0200.
    KOiK02876.
    OMAiGSIHREG.
    OrthoDBiEOG6CGCM5.

    Family and domain databases

    HAMAPiMF_01341. Ribosomal_L15.
    InterProiIPR005749. Ribosomal_L15_bac-type.
    IPR001196. Ribosomal_L15_CS.
    IPR021131. Ribosomal_L18e/L15P.
    [Graphical view]
    PANTHERiPTHR12934. PTHR12934. 1 hit.
    PfamiPF00828. Ribosomal_L18e. 1 hit.
    [Graphical view]
    SUPFAMiSSF52080. SSF52080. 1 hit.
    TIGRFAMsiTIGR01071. rplO_bact. 1 hit.
    PROSITEiPS00475. RIBOSOMAL_L15. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q72I23-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLSDLRPNP GANKRRKRVG RGPGSGHGKT ATRGHKGQKS RSGGLKDPRR    50
    FEGGRSTTLM RLPKRGMQGQ VPGEIKRPRY QGVNLKDLAR FEGEVTPELL 100
    VRAGLLKKGY RLKILGEGEA KPLKVVAHAF SKSALEKLKA AGGEPVLLEA 150
    Length:150
    Mass (Da):16,281
    Last modified:July 5, 2004 - v1
    Checksum:i0175AF33F530AD4F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81651.1.
    RefSeqiYP_005278.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81651; AAS81651; TT_C1309.
    GeneIDi2774473.
    KEGGitth:TTC1309.
    PATRICi23953025. VBITheThe54392_1301.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81651.1 .
    RefSeqi YP_005278.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1VSA X-ray 3.71 J 1-150 [» ]
    1VSP X-ray 3.83 J 1-150 [» ]
    3D5B X-ray 3.21 P 1-150 [» ]
    3D5D X-ray 3.21 P 1-150 [» ]
    3F1F X-ray 3.00 P 1-150 [» ]
    3F1H X-ray 3.00 P 1-150 [» ]
    3MRZ X-ray 3.62 L 1-150 [» ]
    3MS1 X-ray 3.62 L 1-150 [» ]
    3PYO X-ray 3.50 L 5-150 [» ]
    3PYR X-ray 3.50 L 5-150 [» ]
    3PYT X-ray 3.40 L 5-150 [» ]
    3PYV X-ray 3.40 L 5-150 [» ]
    4KBU X-ray 3.86 P 5-150 [» ]
    4KBW X-ray 3.86 P 5-150 [» ]
    4KCZ X-ray 3.50 P 5-150 [» ]
    4KD2 X-ray 3.50 P 5-150 [» ]
    4KD9 X-ray 3.50 P 5-150 [» ]
    4KDB X-ray 3.50 P 5-150 [» ]
    4KDH X-ray 4.00 P 5-150 [» ]
    4KDK X-ray 4.00 P 5-150 [» ]
    4KFI X-ray 3.40 P 5-150 [» ]
    4KFL X-ray 3.40 P 5-150 [» ]
    4L6J X-ray 3.40 L 5-150 [» ]
    4L6L X-ray 3.40 L 5-150 [» ]
    ProteinModelPortali Q72I23.
    SMRi Q72I23. Positions 5-150.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81651 ; AAS81651 ; TT_C1309 .
    GeneIDi 2774473.
    KEGGi tth:TTC1309.
    PATRICi 23953025. VBITheThe54392_1301.

    Phylogenomic databases

    eggNOGi COG0200.
    KOi K02876.
    OMAi GSIHREG.
    OrthoDBi EOG6CGCM5.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1324-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q72I23.

    Family and domain databases

    HAMAPi MF_01341. Ribosomal_L15.
    InterProi IPR005749. Ribosomal_L15_bac-type.
    IPR001196. Ribosomal_L15_CS.
    IPR021131. Ribosomal_L18e/L15P.
    [Graphical view ]
    PANTHERi PTHR12934. PTHR12934. 1 hit.
    Pfami PF00828. Ribosomal_L18e. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52080. SSF52080. 1 hit.
    TIGRFAMsi TIGR01071. rplO_bact. 1 hit.
    PROSITEi PS00475. RIBOSOMAL_L15. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL15_THET2
    AccessioniPrimary (citable) accession number: Q72I23
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 6, 2005
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3