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Q72I23

- RL15_THET2

UniProt

Q72I23 - RL15_THET2

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Protein

50S ribosomal protein L15

Gene

rplO

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1324-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L15UniRule annotation
Gene namesi
Name:rplOUniRule annotation
Ordered Locus Names:TT_C1309
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 15015050S ribosomal protein L15PRO_0000104845Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Structurei

Secondary structure

1
150
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi7 – 93
Beta strandi24 – 296
Turni31 – 333
Beta strandi37 – 404
Beta strandi49 – 513
Beta strandi53 – 553
Turni57 – 604
Beta strandi80 – 845
Helixi85 – 895
Beta strandi93 – 953
Helixi97 – 1015
Turni102 – 1043
Beta strandi111 – 1188
Beta strandi122 – 1254
Beta strandi128 – 1303
Helixi132 – 1398
Beta strandi141 – 1433

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71J1-150[»]
1VSPX-ray3.83J1-150[»]
3D5BX-ray3.21P1-150[»]
3D5DX-ray3.21P1-150[»]
3F1FX-ray3.00P1-150[»]
3F1HX-ray3.00P1-150[»]
3MRZX-ray3.62L1-150[»]
3MS1X-ray3.62L1-150[»]
3PYOX-ray3.50L5-150[»]
3PYRX-ray3.50L5-150[»]
3PYTX-ray3.40L5-150[»]
3PYVX-ray3.40L5-150[»]
4KBUX-ray3.86P5-150[»]
4KBWX-ray3.86P5-150[»]
4KCZX-ray3.50P5-150[»]
4KD2X-ray3.50P5-150[»]
4KD9X-ray3.50P5-150[»]
4KDBX-ray3.50P5-150[»]
4KDHX-ray4.00P5-150[»]
4KDKX-ray4.00P5-150[»]
4KFIX-ray3.40P5-150[»]
4KFLX-ray3.40P5-150[»]
4L6JX-ray3.40L5-150[»]
4L6LX-ray3.40L5-150[»]
ProteinModelPortaliQ72I23.
SMRiQ72I23. Positions 5-150.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72I23.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L15P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0200.
KOiK02876.
OMAiGSIHREG.
OrthoDBiEOG6CGCM5.

Family and domain databases

HAMAPiMF_01341. Ribosomal_L15.
InterProiIPR005749. Ribosomal_L15_bac-type.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PANTHERiPTHR12934. PTHR12934. 1 hit.
PfamiPF00828. Ribosomal_L18e. 1 hit.
[Graphical view]
SUPFAMiSSF52080. SSF52080. 1 hit.
TIGRFAMsiTIGR01071. rplO_bact. 1 hit.
PROSITEiPS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72I23-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKLSDLRPNP GANKRRKRVG RGPGSGHGKT ATRGHKGQKS RSGGLKDPRR
60 70 80 90 100
FEGGRSTTLM RLPKRGMQGQ VPGEIKRPRY QGVNLKDLAR FEGEVTPELL
110 120 130 140 150
VRAGLLKKGY RLKILGEGEA KPLKVVAHAF SKSALEKLKA AGGEPVLLEA
Length:150
Mass (Da):16,281
Last modified:July 5, 2004 - v1
Checksum:i0175AF33F530AD4F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81651.1.
RefSeqiWP_011173703.1. NC_005835.1.
YP_005278.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81651; AAS81651; TT_C1309.
GeneIDi2774473.
KEGGitth:TTC1309.
PATRICi23953025. VBITheThe54392_1301.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81651.1 .
RefSeqi WP_011173703.1. NC_005835.1.
YP_005278.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 J 1-150 [» ]
1VSP X-ray 3.83 J 1-150 [» ]
3D5B X-ray 3.21 P 1-150 [» ]
3D5D X-ray 3.21 P 1-150 [» ]
3F1F X-ray 3.00 P 1-150 [» ]
3F1H X-ray 3.00 P 1-150 [» ]
3MRZ X-ray 3.62 L 1-150 [» ]
3MS1 X-ray 3.62 L 1-150 [» ]
3PYO X-ray 3.50 L 5-150 [» ]
3PYR X-ray 3.50 L 5-150 [» ]
3PYT X-ray 3.40 L 5-150 [» ]
3PYV X-ray 3.40 L 5-150 [» ]
4KBU X-ray 3.86 P 5-150 [» ]
4KBW X-ray 3.86 P 5-150 [» ]
4KCZ X-ray 3.50 P 5-150 [» ]
4KD2 X-ray 3.50 P 5-150 [» ]
4KD9 X-ray 3.50 P 5-150 [» ]
4KDB X-ray 3.50 P 5-150 [» ]
4KDH X-ray 4.00 P 5-150 [» ]
4KDK X-ray 4.00 P 5-150 [» ]
4KFI X-ray 3.40 P 5-150 [» ]
4KFL X-ray 3.40 P 5-150 [» ]
4L6J X-ray 3.40 L 5-150 [» ]
4L6L X-ray 3.40 L 5-150 [» ]
ProteinModelPortali Q72I23.
SMRi Q72I23. Positions 5-150.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81651 ; AAS81651 ; TT_C1309 .
GeneIDi 2774473.
KEGGi tth:TTC1309.
PATRICi 23953025. VBITheThe54392_1301.

Phylogenomic databases

eggNOGi COG0200.
KOi K02876.
OMAi GSIHREG.
OrthoDBi EOG6CGCM5.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1324-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72I23.

Family and domain databases

HAMAPi MF_01341. Ribosomal_L15.
InterProi IPR005749. Ribosomal_L15_bac-type.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view ]
PANTHERi PTHR12934. PTHR12934. 1 hit.
Pfami PF00828. Ribosomal_L18e. 1 hit.
[Graphical view ]
SUPFAMi SSF52080. SSF52080. 1 hit.
TIGRFAMsi TIGR01071. rplO_bact. 1 hit.
PROSITEi PS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL15_THET2
AccessioniPrimary (citable) accession number: Q72I23
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3