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Q72I23 (RL15_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
50S ribosomal protein L15
Gene names
Name:rplO
Ordered Locus Names:TT_C1309
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus

Protein attributes

Sequence length150 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Binds to the 23S rRNA By similarity. HAMAP MF_01341_B

Subunit structure

Part of the 50S ribosomal subunit.

Sequence similarities

Belongs to the ribosomal protein L15P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular componentlarge ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 15015050S ribosomal protein L15 HAMAP MF_01341_B
PRO_0000104845

Secondary structure

1 ......... 150
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q72I23 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 0175AF33F530AD4F

FASTA15016,281
        10         20         30         40         50         60 
MKLSDLRPNP GANKRRKRVG RGPGSGHGKT ATRGHKGQKS RSGGLKDPRR FEGGRSTTLM 

        70         80         90        100        110        120 
RLPKRGMQGQ VPGEIKRPRY QGVNLKDLAR FEGEVTPELL VRAGLLKKGY RLKILGEGEA 

       130        140        150 
KPLKVVAHAF SKSALEKLKA AGGEPVLLEA

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE017221 Genomic DNA. Translation: AAS81651.1.
RefSeqYP_005278.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71J1-150[»]
1VSPX-ray3.83J1-150[»]
3D5BX-ray3.21P1-150[»]
3D5DX-ray3.21P1-150[»]
3F1FX-ray3.00P1-150[»]
3F1HX-ray3.00P1-150[»]
3MRZX-ray3.62L1-150[»]
3MS1X-ray3.62L1-150[»]
3PYOX-ray3.50L5-150[»]
3PYRX-ray3.50L5-150[»]
3PYTX-ray3.40L5-150[»]
3PYVX-ray3.40L5-150[»]
ProteinModelPortalQ72I23.
SMRQ72I23. Positions 5-150.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ72I23.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2774473.
GenomeReviewsGene locus TT_C1309 in contig AE017221_GR.
PATRIC23953025. VBITheThe54392_1301.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0200.
HOGENOMHBG727142.
OMACTKGHKG.
PhylomeDBQ72I23.
ProtClustDBPRK05592.

Enzyme and pathway databases

BioCycTTHE262724:TT_C1309-MONOMER.

Family and domain databases

HAMAPMF_01341_B. Ribosomal_L15_B.
[Tree]
InterProIPR005749. Ribosomal_L15_bac-type.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PANTHERPTHR12934. Ribosom_L15_bac. 1 hit.
PfamPF00828. Ribosomal_L18e. 1 hit.
[Graphical view]
SUPFAMSSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMsTIGR01071. RplO_bact. 1 hit.
PROSITEPS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL15_THET2
AccessionPrimary (citable) accession number: Q72I23
Entry history
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: July 5, 2004
Last modified: January 25, 2012
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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