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Q72I22 (RL30_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L30
Gene names
Name:rpmD
Ordered Locus Names:TT_C1310
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length60 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01371

Sequence similarities

Belongs to the ribosomal protein L30P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentlarge ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 606050S ribosomal protein L30 HAMAP-Rule MF_01371
PRO_1000056126

Secondary structure

............. 60
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q72I22 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: CDC6675F81A8D327

FASTA606,785
        10         20         30         40         50         60 
MPRLKVKLVK SPIGYPKDQK AALKALGLRR LQQERVLEDT PAIRGNVEKV AHLVRVEVVE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS81652.1.
RefSeqYP_005279.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71X1-60[»]
1VSPX-ray3.83X1-60[»]
3D5BX-ray3.2131-60[»]
3D5DX-ray3.2131-60[»]
3F1FX-ray3.0031-60[»]
3F1HX-ray3.0031-60[»]
3MRZX-ray3.62Z1-59[»]
3MS1X-ray3.62Z1-59[»]
3PYOX-ray3.50Z1-59[»]
3PYRX-ray3.50Z1-59[»]
3PYTX-ray3.40Z1-59[»]
3PYVX-ray3.40Z1-59[»]
4KBUX-ray3.8631-60[»]
4KBWX-ray3.8631-60[»]
4KCZX-ray3.5031-60[»]
4KD2X-ray3.5031-60[»]
4KD9X-ray3.5031-60[»]
4KDBX-ray3.5031-60[»]
4KDHX-ray4.0031-60[»]
4KDKX-ray4.0031-60[»]
4KFIX-ray3.4031-59[»]
4KFLX-ray3.4031-59[»]
4L6JX-ray3.40Z1-59[»]
4L6LX-ray3.40Z1-59[»]
ProteinModelPortalQ72I22.
SMRQ72I22. Positions 1-60.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS81652; AAS81652; TT_C1310.
GeneID2774961.
KEGGtth:TTC1310.
PATRIC23953027. VBITheThe54392_1302.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG74699.
KOK02907.
OMASDMLDTI.
OrthoDBEOG6BGP7P.
ProtClustDBPRK05611.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1325-MONOMER.

Family and domain databases

Gene3D3.30.1390.20. 1 hit.
HAMAPMF_01371_B. Ribosomal_L30_B.
InterProIPR005996. Ribosomal_L30_bac-type.
IPR018038. Ribosomal_L30_CS.
IPR016082. Ribosomal_L30_ferredoxin-like.
[Graphical view]
PfamPF00327. Ribosomal_L30. 1 hit.
[Graphical view]
PIRSFPIRSF002211. Ribosomal_L30_bac-type. 1 hit.
SUPFAMSSF55129. SSF55129. 1 hit.
TIGRFAMsTIGR01308. rpmD_bact. 1 hit.
PROSITEPS00634. RIBOSOMAL_L30. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ72I22.

Entry information

Entry nameRL30_THET2
AccessionPrimary (citable) accession number: Q72I22
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references