ID RL6_THET2 Reviewed; 180 AA. AC Q72I19; DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot. DT 05-JUL-2004, sequence version 1. DT 27-MAR-2024, entry version 118. DE RecName: Full=Large ribosomal subunit protein uL6 {ECO:0000255|HAMAP-Rule:MF_01365}; DE AltName: Full=50S ribosomal protein L6 {ECO:0000305}; GN Name=rplF {ECO:0000255|HAMAP-Rule:MF_01365}; GN OrderedLocusNames=TT_C1313; OS Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27). OC Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus. OX NCBI_TaxID=262724; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-163 / DSM 7039 / HB27; RX PubMed=15064768; DOI=10.1038/nbt956; RA Henne A., Brueggemann H., Raasch C., Wiezer A., Hartsch T., Liesegang H., RA Johann A., Lienard T., Gohl O., Martinez-Arias R., Jacobi C., RA Starkuviene V., Schlenczeck S., Dencker S., Huber R., Klenk H.-P., RA Kramer W., Merkl R., Gottschalk G., Fritz H.-J.; RT "The genome sequence of the extreme thermophile Thermus thermophilus."; RL Nat. Biotechnol. 22:547-553(2004). CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its CC secondary structure. It is located near the subunit interface in the CC base of the L7/L12 stalk, and near the tRNA binding site of the CC peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}. CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP- CC Rule:MF_01365}. CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family. CC {ECO:0000255|HAMAP-Rule:MF_01365}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AE017221; AAS81655.1; -; Genomic_DNA. DR RefSeq; WP_011173704.1; NZ_CP133179.1. DR PDB; 4V4I; X-ray; 3.71 A; F=1-180. DR PDB; 4V4J; X-ray; 3.83 A; F=1-180. DR PDB; 4V63; X-ray; 3.21 A; BH/DH=1-180. DR PDB; 4V67; X-ray; 3.00 A; BH/DH=1-180. DR PDB; 4V7P; X-ray; 3.62 A; BG/CG=1-180. DR PDB; 4V83; X-ray; 3.50 A; BG/DG=12-170. DR PDB; 4V84; X-ray; 3.40 A; BG/DG=12-170. DR PDB; 4V9J; X-ray; 3.86 A; BH/DH=12-178. DR PDB; 4V9K; X-ray; 3.50 A; BH/DH=12-178. DR PDB; 4V9L; X-ray; 3.50 A; BH/DH=12-178. DR PDB; 4V9M; X-ray; 4.00 A; BH/DH=12-178. DR PDB; 4V9N; X-ray; 3.40 A; BH/DH=12-170. DR PDB; 4V9Q; X-ray; 3.40 A; AH/CH=12-170. DR PDB; 4W29; X-ray; 3.80 A; BH/DH=12-178. DR PDB; 4XEJ; X-ray; 3.80 A; AL06/BL06=12-170. DR PDB; 5J4D; X-ray; 3.10 A; I/NB=1-180. DR PDB; 5V8I; X-ray; 3.25 A; 1H/2H=1-180. DR PDB; 6B4V; X-ray; 3.40 A; I/MB=1-180. DR PDB; 6BOH; X-ray; 3.40 A; I/NB=1-180. DR PDB; 6BOK; X-ray; 3.55 A; I/LB=1-180. DR PDB; 6N1D; X-ray; 3.20 A; AL06/BL06=1-180. DR PDBsum; 4V4I; -. DR PDBsum; 4V4J; -. DR PDBsum; 4V63; -. DR PDBsum; 4V67; -. DR PDBsum; 4V7P; -. DR PDBsum; 4V83; -. DR PDBsum; 4V84; -. DR PDBsum; 4V9J; -. DR PDBsum; 4V9K; -. DR PDBsum; 4V9L; -. DR PDBsum; 4V9M; -. DR PDBsum; 4V9N; -. DR PDBsum; 4V9Q; -. DR PDBsum; 4W29; -. DR PDBsum; 4XEJ; -. DR PDBsum; 5J4D; -. DR PDBsum; 5V8I; -. DR PDBsum; 6B4V; -. DR PDBsum; 6BOH; -. DR PDBsum; 6BOK; -. DR PDBsum; 6N1D; -. DR AlphaFoldDB; Q72I19; -. DR SMR; Q72I19; -. DR IntAct; Q72I19; 4. DR GeneID; 3169807; -. DR KEGG; tth:TT_C1313; -. DR eggNOG; COG0097; Bacteria. DR HOGENOM; CLU_065464_1_2_0; -. DR OrthoDB; 9805007at2; -. DR EvolutionaryTrace; Q72I19; -. DR Proteomes; UP000000592; Chromosome. DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW. DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW. DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule. DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro. DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule. DR Gene3D; 3.90.930.12; Ribosomal protein L6, alpha-beta domain; 2. DR HAMAP; MF_01365_B; Ribosomal_uL6_B; 1. DR InterPro; IPR000702; Ribosomal_uL6-like. DR InterPro; IPR036789; Ribosomal_uL6-like_a/b-dom_sf. DR InterPro; IPR020040; Ribosomal_uL6_a/b-dom. DR InterPro; IPR019906; Ribosomal_uL6_bac-type. DR NCBIfam; TIGR03654; L6_bact; 1. DR PANTHER; PTHR11655:SF14; 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL; 1. DR PANTHER; PTHR11655; 60S/50S RIBOSOMAL PROTEIN L6/L9; 1. DR Pfam; PF00347; Ribosomal_L6; 2. DR PIRSF; PIRSF002162; Ribosomal_L6; 1. DR PRINTS; PR00059; RIBOSOMALL6. DR SUPFAM; SSF56053; Ribosomal protein L6; 2. PE 1: Evidence at protein level; KW 3D-structure; Ribonucleoprotein; Ribosomal protein; RNA-binding; KW rRNA-binding. FT CHAIN 1..180 FT /note="Large ribosomal subunit protein uL6" FT /id="PRO_0000260969" FT STRAND 16..19 FT /evidence="ECO:0007829|PDB:4V63" FT STRAND 21..23 FT /evidence="ECO:0007829|PDB:4V9L" FT STRAND 25..27 FT /evidence="ECO:0007829|PDB:4V67" FT STRAND 32..34 FT /evidence="ECO:0007829|PDB:4V67" FT STRAND 39..41 FT /evidence="ECO:0007829|PDB:4V9K" FT STRAND 42..44 FT /evidence="ECO:0007829|PDB:4V63" FT STRAND 47..50 FT /evidence="ECO:0007829|PDB:4V9N" FT STRAND 51..53 FT /evidence="ECO:0007829|PDB:4V63" FT STRAND 55..57 FT /evidence="ECO:0007829|PDB:4V9Q" FT HELIX 59..80 FT /evidence="ECO:0007829|PDB:4V67" FT STRAND 83..85 FT /evidence="ECO:0007829|PDB:4V63" FT STRAND 88..93 FT /evidence="ECO:0007829|PDB:4V67" FT STRAND 95..99 FT /evidence="ECO:0007829|PDB:4V67" FT STRAND 102..111 FT /evidence="ECO:0007829|PDB:4V67" FT STRAND 113..115 FT /evidence="ECO:0007829|PDB:4V67" FT STRAND 121..127 FT /evidence="ECO:0007829|PDB:4V67" FT STRAND 130..136 FT /evidence="ECO:0007829|PDB:4V67" FT HELIX 138..151 FT /evidence="ECO:0007829|PDB:4V67" FT STRAND 156..159 FT /evidence="ECO:0007829|PDB:4V84" FT STRAND 161..163 FT /evidence="ECO:0007829|PDB:4V67" SQ SEQUENCE 180 AA; 19532 MW; 1913833C0C30E95D CRC64; MSRIGRLPIP VPKGVSVEVA PGRVKVKGPK GELEVPVSPE MRVVVEEGVV RVERPSDERR HKSLHGLTRT LIANAVKGVS EGYSKELLIK GIGYRARLVG RALELTVGFS HPVVVEPPEG ITFEVPEPTR VRVSGIDKQK VGQVAANIRA IRKPSAYHEK GIYYAGEPVR LKPGKAGAKK //