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Q72I15 (RL24_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L24
Gene names
Name:rplX
Ordered Locus Names:TT_C1317
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length110 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP-Rule MF_01326

One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit By similarity. HAMAP-Rule MF_01326

Subunit structure

Part of the 50S ribosomal subunit.

Sequence similarities

Belongs to the ribosomal protein L24P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 11011050S ribosomal protein L24 HAMAP-Rule MF_01326
PRO_0000241679

Secondary structure

............................. 110
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q72I15 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: A9E773D9A86B819A

FASTA11012,057
        10         20         30         40         50         60 
MRVKMHVKKG DTVLVASGKY KGRVGKVKEV LPKKYAVIVE GVNIVKKAVR VSPKYPQGGF 

        70         80         90        100        110 
IEKEAPLHAS KVRPICPACG KPTRVRKKFL ENGKKIRVCA KCGGALDTEE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS81659.1.
RefSeqYP_005286.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71S1-110[»]
1VSPX-ray3.83S1-110[»]
3D5BX-ray3.21Y1-110[»]
3D5DX-ray3.21Y1-110[»]
3F1FX-ray3.00Y1-110[»]
3F1HX-ray3.00Y1-110[»]
3MRZX-ray3.62U2-110[»]
3MS1X-ray3.62U2-110[»]
3PYOX-ray3.50U2-101[»]
3PYRX-ray3.50U2-101[»]
3PYTX-ray3.40U2-101[»]
3PYVX-ray3.40U2-101[»]
4KBUX-ray3.86Y2-108[»]
4KBWX-ray3.86Y2-108[»]
4KCZX-ray3.50Y2-108[»]
4KD2X-ray3.50Y2-108[»]
4KD9X-ray3.50Y2-108[»]
4KDBX-ray3.50Y2-108[»]
4KDHX-ray4.00Y2-108[»]
4KDKX-ray4.00Y2-108[»]
4KFIX-ray3.40Y2-101[»]
4KFLX-ray3.40Y2-101[»]
4L6JX-ray3.40U2-101[»]
4L6LX-ray3.40U2-101[»]
ProteinModelPortalQ72I15.
SMRQ72I15. Positions 1-110.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS81659; AAS81659; TT_C1317.
GeneID2775892.
KEGGtth:TTC1317.
PATRIC23953041. VBITheThe54392_1309.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0198.
KOK02895.
OMASNVMLYC.
OrthoDBEOG6FFSDM.
ProtClustDBPRK00004.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1332-MONOMER.

Family and domain databases

Gene3D2.30.30.30. 1 hit.
HAMAPMF_01326_B. Ribosomal_L24_B.
InterProIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERPTHR12903. PTHR12903. 1 hit.
PfamPF00467. KOW. 1 hit.
[Graphical view]
SMARTSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMSSF50104. SSF50104. 1 hit.
TIGRFAMsTIGR01079. rplX_bact. 1 hit.
PROSITEPS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ72I15.

Entry information

Entry nameRL24_THET2
AccessionPrimary (citable) accession number: Q72I15
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references