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Q72I15

- RL24_THET2

UniProt

Q72I15 - RL24_THET2

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Protein

50S ribosomal protein L24

Gene

rplX

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-KW
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1332-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L24UniRule annotation
Gene namesi
Name:rplXUniRule annotation
Ordered Locus Names:TT_C1317
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11011050S ribosomal protein L24PRO_0000241679Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Structurei

Secondary structure

1
110
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi10 – 156
Turni19 – 224
Beta strandi24 – 263
Beta strandi29 – 313
Helixi32 – 343
Beta strandi36 – 383
Beta strandi40 – 423
Beta strandi51 – 566
Helixi69 – 713
Beta strandi72 – 743
Beta strandi76 – 794
Beta strandi84 – 863
Beta strandi89 – 913
Beta strandi93 – 953
Beta strandi97 – 993

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71S1-110[»]
1VSPX-ray3.83S1-110[»]
3D5BX-ray3.21Y1-110[»]
3D5DX-ray3.21Y1-110[»]
3F1FX-ray3.00Y1-110[»]
3F1HX-ray3.00Y1-110[»]
3MRZX-ray3.62U2-110[»]
3MS1X-ray3.62U2-110[»]
3PYOX-ray3.50U2-101[»]
3PYRX-ray3.50U2-101[»]
3PYTX-ray3.40U2-101[»]
3PYVX-ray3.40U2-101[»]
4KBUX-ray3.86Y2-108[»]
4KBWX-ray3.86Y2-108[»]
4KCZX-ray3.50Y2-108[»]
4KD2X-ray3.50Y2-108[»]
4KD9X-ray3.50Y2-108[»]
4KDBX-ray3.50Y2-108[»]
4KDHX-ray4.00Y2-108[»]
4KDKX-ray4.00Y2-108[»]
4KFIX-ray3.40Y2-101[»]
4KFLX-ray3.40Y2-101[»]
4L6JX-ray3.40U2-101[»]
4L6LX-ray3.40U2-101[»]
ProteinModelPortaliQ72I15.
SMRiQ72I15. Positions 1-110.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72I15.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L24P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0198.
KOiK02895.
OMAiEREFPIH.
OrthoDBiEOG6FFSDM.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
HAMAPiMF_01326_B. Ribosomal_L24_B.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR12903. PTHR12903. 1 hit.
PfamiPF00467. KOW. 1 hit.
[Graphical view]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01079. rplX_bact. 1 hit.
PROSITEiPS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72I15-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRVKMHVKKG DTVLVASGKY KGRVGKVKEV LPKKYAVIVE GVNIVKKAVR
60 70 80 90 100
VSPKYPQGGF IEKEAPLHAS KVRPICPACG KPTRVRKKFL ENGKKIRVCA
110
KCGGALDTEE
Length:110
Mass (Da):12,057
Last modified:July 5, 2004 - v1
Checksum:iA9E773D9A86B819A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81659.1.
RefSeqiYP_005286.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81659; AAS81659; TT_C1317.
GeneIDi2775892.
KEGGitth:TTC1317.
PATRICi23953041. VBITheThe54392_1309.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81659.1 .
RefSeqi YP_005286.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 S 1-110 [» ]
1VSP X-ray 3.83 S 1-110 [» ]
3D5B X-ray 3.21 Y 1-110 [» ]
3D5D X-ray 3.21 Y 1-110 [» ]
3F1F X-ray 3.00 Y 1-110 [» ]
3F1H X-ray 3.00 Y 1-110 [» ]
3MRZ X-ray 3.62 U 2-110 [» ]
3MS1 X-ray 3.62 U 2-110 [» ]
3PYO X-ray 3.50 U 2-101 [» ]
3PYR X-ray 3.50 U 2-101 [» ]
3PYT X-ray 3.40 U 2-101 [» ]
3PYV X-ray 3.40 U 2-101 [» ]
4KBU X-ray 3.86 Y 2-108 [» ]
4KBW X-ray 3.86 Y 2-108 [» ]
4KCZ X-ray 3.50 Y 2-108 [» ]
4KD2 X-ray 3.50 Y 2-108 [» ]
4KD9 X-ray 3.50 Y 2-108 [» ]
4KDB X-ray 3.50 Y 2-108 [» ]
4KDH X-ray 4.00 Y 2-108 [» ]
4KDK X-ray 4.00 Y 2-108 [» ]
4KFI X-ray 3.40 Y 2-101 [» ]
4KFL X-ray 3.40 Y 2-101 [» ]
4L6J X-ray 3.40 U 2-101 [» ]
4L6L X-ray 3.40 U 2-101 [» ]
ProteinModelPortali Q72I15.
SMRi Q72I15. Positions 1-110.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81659 ; AAS81659 ; TT_C1317 .
GeneIDi 2775892.
KEGGi tth:TTC1317.
PATRICi 23953041. VBITheThe54392_1309.

Phylogenomic databases

eggNOGi COG0198.
KOi K02895.
OMAi EREFPIH.
OrthoDBi EOG6FFSDM.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1332-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72I15.

Family and domain databases

Gene3Di 2.30.30.30. 1 hit.
HAMAPi MF_01326_B. Ribosomal_L24_B.
InterProi IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view ]
PANTHERi PTHR12903. PTHR12903. 1 hit.
Pfami PF00467. KOW. 1 hit.
[Graphical view ]
SMARTi SM00739. KOW. 1 hit.
[Graphical view ]
SUPFAMi SSF50104. SSF50104. 1 hit.
TIGRFAMsi TIGR01079. rplX_bact. 1 hit.
PROSITEi PS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL24_THET2
AccessioniPrimary (citable) accession number: Q72I15
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2004
Last modified: October 1, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3