Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

50S ribosomal protein L24

Gene

rplX

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L24UniRule annotation
Gene namesi
Name:rplXUniRule annotation
Ordered Locus Names:TT_C1317
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000592 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002416791 – 11050S ribosomal protein L24Add BLAST110

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Protein-protein interaction databases

STRINGi262724.TTC1317.

Structurei

Secondary structure

1110
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi10 – 15Combined sources6
Turni19 – 22Combined sources4
Beta strandi24 – 26Combined sources3
Beta strandi29 – 31Combined sources3
Helixi32 – 34Combined sources3
Beta strandi36 – 38Combined sources3
Beta strandi40 – 42Combined sources3
Beta strandi51 – 56Combined sources6
Helixi69 – 71Combined sources3
Beta strandi72 – 74Combined sources3
Beta strandi76 – 79Combined sources4
Beta strandi84 – 86Combined sources3
Beta strandi89 – 91Combined sources3
Beta strandi93 – 95Combined sources3
Beta strandi97 – 99Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4IX-ray3.71S1-110[»]
4V4JX-ray3.83S1-110[»]
4V63X-ray3.21BY/DY1-110[»]
4V67X-ray3.00BY/DY1-110[»]
4V7PX-ray3.62BU/CU2-110[»]
4V83X-ray3.50BU/DU2-101[»]
4V84X-ray3.40BU/DU2-101[»]
4V9JX-ray3.86BY/DY2-108[»]
4V9KX-ray3.50BY/DY2-108[»]
4V9LX-ray3.50BY/DY2-108[»]
4V9MX-ray4.00BY/DY2-108[»]
4V9NX-ray3.40BY/DY2-101[»]
4V9QX-ray3.40AU/CU2-101[»]
4W29X-ray3.80BY/DY2-108[»]
4XEJX-ray3.80AL24/BL242-101[»]
5J4DX-ray3.10AC/V1-110[»]
ProteinModelPortaliQ72I15.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72I15.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L24P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105KAR. Bacteria.
COG0198. LUCA.
KOiK02895.
OMAiGGIIEKP.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
HAMAPiMF_01326_B. Ribosomal_L24_B. 1 hit.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PfamiPF00467. KOW. 1 hit.
PF17136. ribosomal_L24. 1 hit.
[Graphical view]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01079. rplX_bact. 1 hit.
PROSITEiPS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72I15-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVKMHVKKG DTVLVASGKY KGRVGKVKEV LPKKYAVIVE GVNIVKKAVR
60 70 80 90 100
VSPKYPQGGF IEKEAPLHAS KVRPICPACG KPTRVRKKFL ENGKKIRVCA
110
KCGGALDTEE
Length:110
Mass (Da):12,057
Last modified:July 5, 2004 - v1
Checksum:iA9E773D9A86B819A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81659.1.
RefSeqiWP_011173707.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81659; AAS81659; TT_C1317.
KEGGitth:TT_C1317.
PATRICi23953041. VBITheThe54392_1309.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81659.1.
RefSeqiWP_011173707.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4IX-ray3.71S1-110[»]
4V4JX-ray3.83S1-110[»]
4V63X-ray3.21BY/DY1-110[»]
4V67X-ray3.00BY/DY1-110[»]
4V7PX-ray3.62BU/CU2-110[»]
4V83X-ray3.50BU/DU2-101[»]
4V84X-ray3.40BU/DU2-101[»]
4V9JX-ray3.86BY/DY2-108[»]
4V9KX-ray3.50BY/DY2-108[»]
4V9LX-ray3.50BY/DY2-108[»]
4V9MX-ray4.00BY/DY2-108[»]
4V9NX-ray3.40BY/DY2-101[»]
4V9QX-ray3.40AU/CU2-101[»]
4W29X-ray3.80BY/DY2-108[»]
4XEJX-ray3.80AL24/BL242-101[»]
5J4DX-ray3.10AC/V1-110[»]
ProteinModelPortaliQ72I15.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262724.TTC1317.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS81659; AAS81659; TT_C1317.
KEGGitth:TT_C1317.
PATRICi23953041. VBITheThe54392_1309.

Phylogenomic databases

eggNOGiENOG4105KAR. Bacteria.
COG0198. LUCA.
KOiK02895.
OMAiGGIIEKP.

Miscellaneous databases

EvolutionaryTraceiQ72I15.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
HAMAPiMF_01326_B. Ribosomal_L24_B. 1 hit.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PfamiPF00467. KOW. 1 hit.
PF17136. ribosomal_L24. 1 hit.
[Graphical view]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01079. rplX_bact. 1 hit.
PROSITEiPS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL24_THET2
AccessioniPrimary (citable) accession number: Q72I15
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2004
Last modified: November 2, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.