50S ribosomal protein L14 - Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)

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Q72I14 (RL14_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 66. History...

Clusters with 100%, 90%, 50% identity |

Documents (3) |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
50S ribosomal protein L14

Gene names

Name:	rplN
Ordered Locus Names:	TT_C1318

Organism

Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus ›

Protein attributes

Sequence length	122 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome By similarity. HAMAP-Rule MF_01367
Subunit structure	Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8 By similarity.
Sequence similarities	Belongs to the ribosomal protein L14P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	3D-structure Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

122

50S ribosomal protein L14 HAMAP-Rule MF_01367

PRO_0000266574

Secondary structure

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122

Helix Strand Turn

Sequences

Sequence

Length

Mass (Da)

Tools

Q72I14 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 7C1AB92EBABC9001
Show »

122

13,289

        10         20         30         40         50         60 
MIQPQTYLEV ADNTGARKIM CIRVLKGSNA KYATVGDVIV ASVKEAIPRG AVKEGDVVKA 

        70         80         90        100        110        120 
VVVRTKKEVK RPDGSAIRFD DNAAVIINNQ LEPRGTRVFG PVARELREKG FMKIVSLAPE 


VL

References

[1]

"The genome sequence of the extreme thermophile Thermus thermophilus."
Henne A., Brueggemann H., Raasch C., Wiezer A., Hartsch T., Liesegang H., Johann A., Lienard T., Gohl O., Martinez-Arias R., Jacobi C., Starkuviene V., Schlenczeck S., Dencker S., Huber R., Klenk H.-P., Kramer W., Merkl R., Gottschalk G., Fritz H.-J.
Nat. Biotechnol. 22:547-553(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HB27 / ATCC BAA-163 / DSM 7039.

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Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE017221 Genomic DNA. Translation: AAS81660.1.

RefSeq

YP_005287.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1VSA	X-ray	3.71	I	1-122	[»]
1VSP	X-ray	3.83	I	1-122	[»]
3D5B	X-ray	3.21	O	1-122	[»]
3D5D	X-ray	3.21	O	1-122	[»]
3F1F	X-ray	3.00	O	1-122	[»]
3F1H	X-ray	3.00	O	1-122	[»]
3MRZ	X-ray	3.62	K	1-122	[»]
3MS1	X-ray	3.62	K	1-122	[»]
3PYO	X-ray	3.50	K	1-122	[»]
3PYR	X-ray	3.50	K	1-122	[»]
3PYT	X-ray	3.40	K	1-122	[»]
3PYV	X-ray	3.40	K	1-122	[»]

ProteinModelPortal

SMR

Q72I14. Positions 1-122.

ModBase

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

AAS81660; AAS81660; TT_C1318.

GeneID

KEGG

PATRIC

23953043. VBITheThe54392_1310.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

KO

OMA

ProtClustDB

Family and domain databases

Gene3D

2.40.150.20. 1 hit.

HAMAP

MF_01367_B. Ribosomal_L14_B.

InterPro

IPR005745. Ribosomal_L14_bac-type.
IPR019972. Ribosomal_L14_CS.
IPR023571. Ribosomal_L14_dom.
IPR000218. Ribosomal_L14b/L23e.
[Graphical view]

PANTHER

PTHR11761. PTHR11761. 1 hit.
PTHR11761:SF3. PTHR11761:SF3. 1 hit.

Pfam

PF00238. Ribosomal_L14. 1 hit.
[Graphical view]

SUPFAM

SSF50193. Ribosomal_L14. 1 hit.

TIGRFAMs

TIGR01067. rplN_bact. 1 hit.

PROSITE

PS00049. RIBOSOMAL_L14. 1 hit.
[Graphical view]

ProtoNet

Other

EvolutionaryTrace

Entry information

Entry name

RL14_THET2

Accession

Primary (citable) accession number: Q72I14

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 12, 2006
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents