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Protein

50S ribosomal protein L14

Gene

rplN

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L14UniRule annotation
Gene namesi
Name:rplNUniRule annotation
Ordered Locus Names:TT_C1318
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000592 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002665741 – 12250S ribosomal protein L14Add BLAST122

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.UniRule annotation

Protein-protein interaction databases

STRINGi262724.TTC1318.

Structurei

Secondary structure

1122
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi7 – 10Combined sources4
Beta strandi15 – 24Combined sources10
Beta strandi26 – 29Combined sources4
Beta strandi38 – 46Combined sources9
Beta strandi48 – 52Combined sources5
Beta strandi57 – 64Combined sources8
Beta strandi69 – 71Combined sources3
Turni72 – 74Combined sources3
Beta strandi76 – 81Combined sources6
Beta strandi83 – 87Combined sources5
Beta strandi89 – 91Combined sources3
Beta strandi93 – 96Combined sources4
Beta strandi100 – 102Combined sources3
Helixi105 – 109Combined sources5
Helixi112 – 117Combined sources6
Beta strandi119 – 121Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4IX-ray3.71I1-122[»]
4V4JX-ray3.83I1-122[»]
4V63X-ray3.21BO/DO1-122[»]
4V67X-ray3.00BO/DO1-122[»]
4V7PX-ray3.62BK/CK1-122[»]
4V83X-ray3.50BK/DK1-122[»]
4V84X-ray3.40BK/DK1-122[»]
4V9JX-ray3.86BO/DO1-122[»]
4V9KX-ray3.50BO/DO1-122[»]
4V9LX-ray3.50BO/DO1-122[»]
4V9MX-ray4.00BO/DO1-122[»]
4V9NX-ray3.40BO/DO1-122[»]
4V9QX-ray3.40AK/CK1-122[»]
4W29X-ray3.80BO/DO1-122[»]
4XEJX-ray3.80AL14/BL141-122[»]
5J4DX-ray3.10L/QB1-122[»]
ProteinModelPortaliQ72I14.
SMRiQ72I14.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72I14.

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL14 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UNN. Bacteria.
COG0093. LUCA.
KOiK02874.
OMAiIKGPVAR.

Family and domain databases

Gene3Di2.40.150.20. 1 hit.
HAMAPiMF_01367. Ribosomal_L14. 1 hit.
InterProiView protein in InterPro
IPR000218. Ribosomal_L14P.
IPR005745. Ribosomal_L14P_bac-type.
IPR019972. Ribosomal_L14P_CS.
PANTHERiPTHR11761. PTHR11761. 1 hit.
PfamiView protein in Pfam
PF00238. Ribosomal_L14. 1 hit.
SMARTiView protein in SMART
SM01374. Ribosomal_L14. 1 hit.
SUPFAMiSSF50193. SSF50193. 1 hit.
TIGRFAMsiTIGR01067. rplN_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00049. RIBOSOMAL_L14. 1 hit.

Sequencei

Sequence statusi: Complete.

Q72I14-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIQPQTYLEV ADNTGARKIM CIRVLKGSNA KYATVGDVIV ASVKEAIPRG
60 70 80 90 100
AVKEGDVVKA VVVRTKKEVK RPDGSAIRFD DNAAVIINNQ LEPRGTRVFG
110 120
PVARELREKG FMKIVSLAPE VL
Length:122
Mass (Da):13,289
Last modified:July 5, 2004 - v1
Checksum:i7C1AB92EBABC9001
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81660.1.
RefSeqiWP_003043914.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81660; AAS81660; TT_C1318.
KEGGitth:TT_C1318.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL14_THET2
AccessioniPrimary (citable) accession number: Q72I14
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 5, 2004
Last modified: June 7, 2017
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families