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Protein

50S ribosomal protein L14

Gene

rplN

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L14UniRule annotation
Gene namesi
Name:rplNUniRule annotation
Ordered Locus Names:TT_C1318
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000592 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002665741 – 12250S ribosomal protein L14Add BLAST122

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.UniRule annotation

Protein-protein interaction databases

STRINGi262724.TTC1318.

Structurei

Secondary structure

1122
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi7 – 10Combined sources4
Beta strandi15 – 24Combined sources10
Beta strandi26 – 29Combined sources4
Beta strandi38 – 46Combined sources9
Beta strandi48 – 52Combined sources5
Beta strandi57 – 64Combined sources8
Beta strandi69 – 71Combined sources3
Turni72 – 74Combined sources3
Beta strandi76 – 81Combined sources6
Beta strandi83 – 87Combined sources5
Beta strandi89 – 91Combined sources3
Beta strandi93 – 96Combined sources4
Beta strandi100 – 102Combined sources3
Helixi105 – 109Combined sources5
Helixi112 – 117Combined sources6
Beta strandi119 – 121Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4IX-ray3.71I1-122[»]
4V4JX-ray3.83I1-122[»]
4V63X-ray3.21BO/DO1-122[»]
4V67X-ray3.00BO/DO1-122[»]
4V7PX-ray3.62BK/CK1-122[»]
4V83X-ray3.50BK/DK1-122[»]
4V84X-ray3.40BK/DK1-122[»]
4V9JX-ray3.86BO/DO1-122[»]
4V9KX-ray3.50BO/DO1-122[»]
4V9LX-ray3.50BO/DO1-122[»]
4V9MX-ray4.00BO/DO1-122[»]
4V9NX-ray3.40BO/DO1-122[»]
4V9QX-ray3.40AK/CK1-122[»]
4W29X-ray3.80BO/DO1-122[»]
4XEJX-ray3.80AL14/BL141-122[»]
5J4DX-ray3.10L/QB1-122[»]
ProteinModelPortaliQ72I14.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72I14.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L14P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UNN. Bacteria.
COG0093. LUCA.
KOiK02874.
OMAiRIQCIRV.

Family and domain databases

Gene3Di2.40.150.20. 1 hit.
HAMAPiMF_01367. Ribosomal_L14. 1 hit.
InterProiIPR000218. Ribosomal_L14P.
IPR005745. Ribosomal_L14P_bac-type.
IPR019972. Ribosomal_L14P_CS.
[Graphical view]
PANTHERiPTHR11761. PTHR11761. 1 hit.
PfamiPF00238. Ribosomal_L14. 1 hit.
[Graphical view]
SMARTiSM01374. Ribosomal_L14. 1 hit.
[Graphical view]
SUPFAMiSSF50193. SSF50193. 1 hit.
TIGRFAMsiTIGR01067. rplN_bact. 1 hit.
PROSITEiPS00049. RIBOSOMAL_L14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72I14-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIQPQTYLEV ADNTGARKIM CIRVLKGSNA KYATVGDVIV ASVKEAIPRG
60 70 80 90 100
AVKEGDVVKA VVVRTKKEVK RPDGSAIRFD DNAAVIINNQ LEPRGTRVFG
110 120
PVARELREKG FMKIVSLAPE VL
Length:122
Mass (Da):13,289
Last modified:July 5, 2004 - v1
Checksum:i7C1AB92EBABC9001
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81660.1.
RefSeqiWP_003043914.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81660; AAS81660; TT_C1318.
KEGGitth:TT_C1318.
PATRICi23953043. VBITheThe54392_1310.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81660.1.
RefSeqiWP_003043914.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4IX-ray3.71I1-122[»]
4V4JX-ray3.83I1-122[»]
4V63X-ray3.21BO/DO1-122[»]
4V67X-ray3.00BO/DO1-122[»]
4V7PX-ray3.62BK/CK1-122[»]
4V83X-ray3.50BK/DK1-122[»]
4V84X-ray3.40BK/DK1-122[»]
4V9JX-ray3.86BO/DO1-122[»]
4V9KX-ray3.50BO/DO1-122[»]
4V9LX-ray3.50BO/DO1-122[»]
4V9MX-ray4.00BO/DO1-122[»]
4V9NX-ray3.40BO/DO1-122[»]
4V9QX-ray3.40AK/CK1-122[»]
4W29X-ray3.80BO/DO1-122[»]
4XEJX-ray3.80AL14/BL141-122[»]
5J4DX-ray3.10L/QB1-122[»]
ProteinModelPortaliQ72I14.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262724.TTC1318.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS81660; AAS81660; TT_C1318.
KEGGitth:TT_C1318.
PATRICi23953043. VBITheThe54392_1310.

Phylogenomic databases

eggNOGiENOG4108UNN. Bacteria.
COG0093. LUCA.
KOiK02874.
OMAiRIQCIRV.

Miscellaneous databases

EvolutionaryTraceiQ72I14.

Family and domain databases

Gene3Di2.40.150.20. 1 hit.
HAMAPiMF_01367. Ribosomal_L14. 1 hit.
InterProiIPR000218. Ribosomal_L14P.
IPR005745. Ribosomal_L14P_bac-type.
IPR019972. Ribosomal_L14P_CS.
[Graphical view]
PANTHERiPTHR11761. PTHR11761. 1 hit.
PfamiPF00238. Ribosomal_L14. 1 hit.
[Graphical view]
SMARTiSM01374. Ribosomal_L14. 1 hit.
[Graphical view]
SUPFAMiSSF50193. SSF50193. 1 hit.
TIGRFAMsiTIGR01067. rplN_bact. 1 hit.
PROSITEiPS00049. RIBOSOMAL_L14. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL14_THET2
AccessioniPrimary (citable) accession number: Q72I14
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 5, 2004
Last modified: November 2, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.