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Q72I14

- RL14_THET2

UniProt

Q72I14 - RL14_THET2

Protein

50S ribosomal protein L14

Gene

rplN

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1333-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L14UniRule annotation
    Gene namesi
    Name:rplNUniRule annotation
    Ordered Locus Names:TT_C1318
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12212250S ribosomal protein L14PRO_0000266574Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.UniRule annotation

    Structurei

    Secondary structure

    1
    122
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi7 – 104
    Beta strandi15 – 2410
    Beta strandi26 – 294
    Beta strandi38 – 469
    Beta strandi48 – 525
    Beta strandi57 – 648
    Beta strandi69 – 713
    Turni72 – 743
    Beta strandi76 – 816
    Beta strandi83 – 875
    Beta strandi89 – 913
    Beta strandi93 – 964
    Beta strandi100 – 1023
    Helixi105 – 1095
    Helixi112 – 1176
    Beta strandi119 – 1213

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1VSAX-ray3.71I1-122[»]
    1VSPX-ray3.83I1-122[»]
    3D5BX-ray3.21O1-122[»]
    3D5DX-ray3.21O1-122[»]
    3F1FX-ray3.00O1-122[»]
    3F1HX-ray3.00O1-122[»]
    3MRZX-ray3.62K1-122[»]
    3MS1X-ray3.62K1-122[»]
    3PYOX-ray3.50K1-122[»]
    3PYRX-ray3.50K1-122[»]
    3PYTX-ray3.40K1-122[»]
    3PYVX-ray3.40K1-122[»]
    4KBUX-ray3.86O1-122[»]
    4KBWX-ray3.86O1-122[»]
    4KCZX-ray3.50O1-122[»]
    4KD2X-ray3.50O1-122[»]
    4KD9X-ray3.50O1-122[»]
    4KDBX-ray3.50O1-122[»]
    4KDHX-ray4.00O1-122[»]
    4KDKX-ray4.00O1-122[»]
    4KFIX-ray3.40O1-122[»]
    4KFLX-ray3.40O1-122[»]
    4L6JX-ray3.40K1-122[»]
    4L6LX-ray3.40K1-122[»]
    ProteinModelPortaliQ72I14.
    SMRiQ72I14. Positions 1-122.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ72I14.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L14P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0093.
    KOiK02874.
    OMAiLNTHVES.
    OrthoDBiEOG6GBMJ6.

    Family and domain databases

    Gene3Di2.40.150.20. 1 hit.
    HAMAPiMF_01367. Ribosomal_L14.
    InterProiIPR005745. Ribosomal_L14_bac-type.
    IPR019972. Ribosomal_L14_CS.
    IPR023571. Ribosomal_L14_dom.
    IPR000218. Ribosomal_L14b/L23e.
    [Graphical view]
    PANTHERiPTHR11761. PTHR11761. 1 hit.
    PfamiPF00238. Ribosomal_L14. 1 hit.
    [Graphical view]
    SUPFAMiSSF50193. SSF50193. 1 hit.
    TIGRFAMsiTIGR01067. rplN_bact. 1 hit.
    PROSITEiPS00049. RIBOSOMAL_L14. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q72I14-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIQPQTYLEV ADNTGARKIM CIRVLKGSNA KYATVGDVIV ASVKEAIPRG    50
    AVKEGDVVKA VVVRTKKEVK RPDGSAIRFD DNAAVIINNQ LEPRGTRVFG 100
    PVARELREKG FMKIVSLAPE VL 122
    Length:122
    Mass (Da):13,289
    Last modified:July 5, 2004 - v1
    Checksum:i7C1AB92EBABC9001
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81660.1.
    RefSeqiYP_005287.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81660; AAS81660; TT_C1318.
    GeneIDi2774983.
    KEGGitth:TTC1318.
    PATRICi23953043. VBITheThe54392_1310.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81660.1 .
    RefSeqi YP_005287.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1VSA X-ray 3.71 I 1-122 [» ]
    1VSP X-ray 3.83 I 1-122 [» ]
    3D5B X-ray 3.21 O 1-122 [» ]
    3D5D X-ray 3.21 O 1-122 [» ]
    3F1F X-ray 3.00 O 1-122 [» ]
    3F1H X-ray 3.00 O 1-122 [» ]
    3MRZ X-ray 3.62 K 1-122 [» ]
    3MS1 X-ray 3.62 K 1-122 [» ]
    3PYO X-ray 3.50 K 1-122 [» ]
    3PYR X-ray 3.50 K 1-122 [» ]
    3PYT X-ray 3.40 K 1-122 [» ]
    3PYV X-ray 3.40 K 1-122 [» ]
    4KBU X-ray 3.86 O 1-122 [» ]
    4KBW X-ray 3.86 O 1-122 [» ]
    4KCZ X-ray 3.50 O 1-122 [» ]
    4KD2 X-ray 3.50 O 1-122 [» ]
    4KD9 X-ray 3.50 O 1-122 [» ]
    4KDB X-ray 3.50 O 1-122 [» ]
    4KDH X-ray 4.00 O 1-122 [» ]
    4KDK X-ray 4.00 O 1-122 [» ]
    4KFI X-ray 3.40 O 1-122 [» ]
    4KFL X-ray 3.40 O 1-122 [» ]
    4L6J X-ray 3.40 K 1-122 [» ]
    4L6L X-ray 3.40 K 1-122 [» ]
    ProteinModelPortali Q72I14.
    SMRi Q72I14. Positions 1-122.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81660 ; AAS81660 ; TT_C1318 .
    GeneIDi 2774983.
    KEGGi tth:TTC1318.
    PATRICi 23953043. VBITheThe54392_1310.

    Phylogenomic databases

    eggNOGi COG0093.
    KOi K02874.
    OMAi LNTHVES.
    OrthoDBi EOG6GBMJ6.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1333-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q72I14.

    Family and domain databases

    Gene3Di 2.40.150.20. 1 hit.
    HAMAPi MF_01367. Ribosomal_L14.
    InterProi IPR005745. Ribosomal_L14_bac-type.
    IPR019972. Ribosomal_L14_CS.
    IPR023571. Ribosomal_L14_dom.
    IPR000218. Ribosomal_L14b/L23e.
    [Graphical view ]
    PANTHERi PTHR11761. PTHR11761. 1 hit.
    Pfami PF00238. Ribosomal_L14. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50193. SSF50193. 1 hit.
    TIGRFAMsi TIGR01067. rplN_bact. 1 hit.
    PROSITEi PS00049. RIBOSOMAL_L14. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL14_THET2
    AccessioniPrimary (citable) accession number: Q72I14
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 12, 2006
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3