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Q72I12

- RL29_THET2

UniProt

Q72I12 - RL29_THET2

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Protein
50S ribosomal protein L29
Gene
rpmC, TT_C1320
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1335-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L29
Gene namesi
Name:rpmC
Ordered Locus Names:TT_C1320
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 727250S ribosomal protein L29UniRule annotation
PRO_0000130482Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC1320.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi2 – 1110
Turni12 – 154
Helixi17 – 4024
Beta strandi42 – 443
Helixi49 – 6113

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71W1-72[»]
1VSPX-ray3.83W1-72[»]
3D5BX-ray3.2121-72[»]
3D5DX-ray3.2121-72[»]
3F1FX-ray3.0021-72[»]
3F1HX-ray3.0021-72[»]
3MRZX-ray3.62Y1-72[»]
3MS1X-ray3.62Y1-72[»]
3PYOX-ray3.50Y1-62[»]
3PYRX-ray3.50Y1-62[»]
3PYTX-ray3.40Y1-62[»]
3PYVX-ray3.40Y1-62[»]
4KBUX-ray3.8622-72[»]
4KBWX-ray3.8622-72[»]
4KCZX-ray3.5022-72[»]
4KD2X-ray3.5022-72[»]
4KD9X-ray3.5022-72[»]
4KDBX-ray3.5022-72[»]
4KDHX-ray4.0022-72[»]
4KDKX-ray4.0022-72[»]
4KFIX-ray3.4021-62[»]
4KFLX-ray3.4021-62[»]
4L6JX-ray3.40Y1-62[»]
4L6LX-ray3.40Y1-62[»]
ProteinModelPortaliQ72I12.
SMRiQ72I12. Positions 1-62.

Miscellaneous databases

EvolutionaryTraceiQ72I12.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiNOG251102.
KOiK02904.
OMAiAVEPYHE.
OrthoDBiEOG6VTK8Z.

Family and domain databases

Gene3Di1.10.287.310. 1 hit.
HAMAPiMF_00374. Ribosomal_L29.
InterProiIPR001854. Ribosomal_L29.
IPR018254. Ribosomal_L29_CS.
[Graphical view]
PfamiPF00831. Ribosomal_L29. 1 hit.
[Graphical view]
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiPS00579. RIBOSOMAL_L29. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72I12-1 [UniParc]FASTAAdd to Basket

« Hide

MKLSEVRKQL EEARKLSPVE LEKLVREKKR ELMELRFQAS IGQLSQNHKI   50
RDLKRQIARL LTVLNEKRRQ NA 72
Length:72
Mass (Da):8,650
Last modified:July 5, 2004 - v1
Checksum:iC113B72000929584
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81662.1.
RefSeqiYP_005289.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81662; AAS81662; TT_C1320.
GeneIDi2774482.
KEGGitth:TTC1320.
PATRICi23953047. VBITheThe54392_1312.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81662.1 .
RefSeqi YP_005289.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 W 1-72 [» ]
1VSP X-ray 3.83 W 1-72 [» ]
3D5B X-ray 3.21 2 1-72 [» ]
3D5D X-ray 3.21 2 1-72 [» ]
3F1F X-ray 3.00 2 1-72 [» ]
3F1H X-ray 3.00 2 1-72 [» ]
3MRZ X-ray 3.62 Y 1-72 [» ]
3MS1 X-ray 3.62 Y 1-72 [» ]
3PYO X-ray 3.50 Y 1-62 [» ]
3PYR X-ray 3.50 Y 1-62 [» ]
3PYT X-ray 3.40 Y 1-62 [» ]
3PYV X-ray 3.40 Y 1-62 [» ]
4KBU X-ray 3.86 2 2-72 [» ]
4KBW X-ray 3.86 2 2-72 [» ]
4KCZ X-ray 3.50 2 2-72 [» ]
4KD2 X-ray 3.50 2 2-72 [» ]
4KD9 X-ray 3.50 2 2-72 [» ]
4KDB X-ray 3.50 2 2-72 [» ]
4KDH X-ray 4.00 2 2-72 [» ]
4KDK X-ray 4.00 2 2-72 [» ]
4KFI X-ray 3.40 2 1-62 [» ]
4KFL X-ray 3.40 2 1-62 [» ]
4L6J X-ray 3.40 Y 1-62 [» ]
4L6L X-ray 3.40 Y 1-62 [» ]
ProteinModelPortali Q72I12.
SMRi Q72I12. Positions 1-62.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC1320.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81662 ; AAS81662 ; TT_C1320 .
GeneIDi 2774482.
KEGGi tth:TTC1320.
PATRICi 23953047. VBITheThe54392_1312.

Phylogenomic databases

eggNOGi NOG251102.
KOi K02904.
OMAi AVEPYHE.
OrthoDBi EOG6VTK8Z.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1335-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72I12.

Family and domain databases

Gene3Di 1.10.287.310. 1 hit.
HAMAPi MF_00374. Ribosomal_L29.
InterProi IPR001854. Ribosomal_L29.
IPR018254. Ribosomal_L29_CS.
[Graphical view ]
Pfami PF00831. Ribosomal_L29. 1 hit.
[Graphical view ]
SUPFAMi SSF46561. SSF46561. 1 hit.
TIGRFAMsi TIGR00012. L29. 1 hit.
PROSITEi PS00579. RIBOSOMAL_L29. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL29_THET2
AccessioniPrimary (citable) accession number: Q72I12
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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