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Protein

50S ribosomal protein L29

Gene

rpmC

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L29UniRule annotation
Gene namesi
Name:rpmCUniRule annotation
Ordered Locus Names:TT_C1320
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000592 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001304821 – 7250S ribosomal protein L29Add BLAST72

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC1320.

Structurei

Secondary structure

172
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi2 – 11Combined sources10
Turni12 – 15Combined sources4
Helixi17 – 40Combined sources24
Beta strandi42 – 44Combined sources3
Helixi49 – 61Combined sources13

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4IX-ray3.71W1-72[»]
4V4JX-ray3.83W1-72[»]
4V63X-ray3.21B2/D21-72[»]
4V67X-ray3.00B2/D21-72[»]
4V7PX-ray3.62BY/CY1-72[»]
4V83X-ray3.50BY/DY1-62[»]
4V84X-ray3.40BY/DY1-62[»]
4V9JX-ray3.86B2/D22-72[»]
4V9KX-ray3.50B2/D22-72[»]
4V9LX-ray3.50B2/D22-72[»]
4V9MX-ray4.00B2/D22-72[»]
4V9NX-ray3.40B2/D21-62[»]
4V9QX-ray3.40AY/CY1-62[»]
4W29X-ray3.80B2/D22-72[»]
4XEJX-ray3.80AL29/BL291-62[»]
5J4DX-ray3.10EC/Z1-72[»]
ProteinModelPortaliQ72I12.
SMRiQ72I12.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72I12.

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL29 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108CHD. Bacteria.
COG0255. LUCA.
KOiK02904.
OMAiRFQNATN.

Family and domain databases

HAMAPiMF_00374. Ribosomal_L29. 1 hit.
InterProiView protein in InterPro
IPR001854. Ribosomal_L29/L35.
IPR018254. Ribosomal_L29_CS.
PfamiView protein in Pfam
PF00831. Ribosomal_L29. 1 hit.
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiView protein in PROSITE
PS00579. RIBOSOMAL_L29. 1 hit.

Sequencei

Sequence statusi: Complete.

Q72I12-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLSEVRKQL EEARKLSPVE LEKLVREKKR ELMELRFQAS IGQLSQNHKI
60 70
RDLKRQIARL LTVLNEKRRQ NA
Length:72
Mass (Da):8,650
Last modified:July 5, 2004 - v1
Checksum:iC113B72000929584
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS81662.1.
RefSeqiWP_008633416.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81662; AAS81662; TT_C1320.
KEGGitth:TT_C1320.

Similar proteinsi

Entry informationi

Entry nameiRL29_THET2
AccessioniPrimary (citable) accession number: Q72I12
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: July 5, 2004
Last modified: August 30, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families