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Q72I12

- RL29_THET2

UniProt

Q72I12 - RL29_THET2

Protein

50S ribosomal protein L29

Gene

rpmC

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1335-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L29UniRule annotation
    Gene namesi
    Name:rpmCUniRule annotation
    Ordered Locus Names:TT_C1320
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 727250S ribosomal protein L29PRO_0000130482Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi262724.TTC1320.

    Structurei

    Secondary structure

    1
    72
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi2 – 1110
    Turni12 – 154
    Helixi17 – 4024
    Beta strandi42 – 443
    Helixi49 – 6113

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1VSAX-ray3.71W1-72[»]
    1VSPX-ray3.83W1-72[»]
    3D5BX-ray3.2121-72[»]
    3D5DX-ray3.2121-72[»]
    3F1FX-ray3.0021-72[»]
    3F1HX-ray3.0021-72[»]
    3MRZX-ray3.62Y1-72[»]
    3MS1X-ray3.62Y1-72[»]
    3PYOX-ray3.50Y1-62[»]
    3PYRX-ray3.50Y1-62[»]
    3PYTX-ray3.40Y1-62[»]
    3PYVX-ray3.40Y1-62[»]
    4KBUX-ray3.8622-72[»]
    4KBWX-ray3.8622-72[»]
    4KCZX-ray3.5022-72[»]
    4KD2X-ray3.5022-72[»]
    4KD9X-ray3.5022-72[»]
    4KDBX-ray3.5022-72[»]
    4KDHX-ray4.0022-72[»]
    4KDKX-ray4.0022-72[»]
    4KFIX-ray3.4021-62[»]
    4KFLX-ray3.4021-62[»]
    4L6JX-ray3.40Y1-62[»]
    4L6LX-ray3.40Y1-62[»]
    ProteinModelPortaliQ72I12.
    SMRiQ72I12. Positions 1-62.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ72I12.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L29P family.UniRule annotation

    Phylogenomic databases

    eggNOGiNOG251102.
    KOiK02904.
    OMAiAVEPYHE.
    OrthoDBiEOG6VTK8Z.

    Family and domain databases

    Gene3Di1.10.287.310. 1 hit.
    HAMAPiMF_00374. Ribosomal_L29.
    InterProiIPR001854. Ribosomal_L29.
    IPR018254. Ribosomal_L29_CS.
    [Graphical view]
    PfamiPF00831. Ribosomal_L29. 1 hit.
    [Graphical view]
    SUPFAMiSSF46561. SSF46561. 1 hit.
    TIGRFAMsiTIGR00012. L29. 1 hit.
    PROSITEiPS00579. RIBOSOMAL_L29. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q72I12-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLSEVRKQL EEARKLSPVE LEKLVREKKR ELMELRFQAS IGQLSQNHKI   50
    RDLKRQIARL LTVLNEKRRQ NA 72
    Length:72
    Mass (Da):8,650
    Last modified:July 5, 2004 - v1
    Checksum:iC113B72000929584
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81662.1.
    RefSeqiYP_005289.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81662; AAS81662; TT_C1320.
    GeneIDi2774482.
    KEGGitth:TTC1320.
    PATRICi23953047. VBITheThe54392_1312.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81662.1 .
    RefSeqi YP_005289.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1VSA X-ray 3.71 W 1-72 [» ]
    1VSP X-ray 3.83 W 1-72 [» ]
    3D5B X-ray 3.21 2 1-72 [» ]
    3D5D X-ray 3.21 2 1-72 [» ]
    3F1F X-ray 3.00 2 1-72 [» ]
    3F1H X-ray 3.00 2 1-72 [» ]
    3MRZ X-ray 3.62 Y 1-72 [» ]
    3MS1 X-ray 3.62 Y 1-72 [» ]
    3PYO X-ray 3.50 Y 1-62 [» ]
    3PYR X-ray 3.50 Y 1-62 [» ]
    3PYT X-ray 3.40 Y 1-62 [» ]
    3PYV X-ray 3.40 Y 1-62 [» ]
    4KBU X-ray 3.86 2 2-72 [» ]
    4KBW X-ray 3.86 2 2-72 [» ]
    4KCZ X-ray 3.50 2 2-72 [» ]
    4KD2 X-ray 3.50 2 2-72 [» ]
    4KD9 X-ray 3.50 2 2-72 [» ]
    4KDB X-ray 3.50 2 2-72 [» ]
    4KDH X-ray 4.00 2 2-72 [» ]
    4KDK X-ray 4.00 2 2-72 [» ]
    4KFI X-ray 3.40 2 1-62 [» ]
    4KFL X-ray 3.40 2 1-62 [» ]
    4L6J X-ray 3.40 Y 1-62 [» ]
    4L6L X-ray 3.40 Y 1-62 [» ]
    ProteinModelPortali Q72I12.
    SMRi Q72I12. Positions 1-62.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC1320.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81662 ; AAS81662 ; TT_C1320 .
    GeneIDi 2774482.
    KEGGi tth:TTC1320.
    PATRICi 23953047. VBITheThe54392_1312.

    Phylogenomic databases

    eggNOGi NOG251102.
    KOi K02904.
    OMAi AVEPYHE.
    OrthoDBi EOG6VTK8Z.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1335-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q72I12.

    Family and domain databases

    Gene3Di 1.10.287.310. 1 hit.
    HAMAPi MF_00374. Ribosomal_L29.
    InterProi IPR001854. Ribosomal_L29.
    IPR018254. Ribosomal_L29_CS.
    [Graphical view ]
    Pfami PF00831. Ribosomal_L29. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46561. SSF46561. 1 hit.
    TIGRFAMsi TIGR00012. L29. 1 hit.
    PROSITEi PS00579. RIBOSOMAL_L29. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL29_THET2
    AccessioniPrimary (citable) accession number: Q72I12
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 30, 2005
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 66 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3