SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q72I11

- RL16_THET2

UniProt

Q72I11 - RL16_THET2

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
50S ribosomal protein L16
Gene
rplP, TT_C1321
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
  3. tRNA binding Source: UniProtKB-KW

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding, tRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1336-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L16
Gene namesi
Name:rplP
Ordered Locus Names:TT_C1321
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14114150S ribosomal protein L16UniRule annotation
PRO_0000062236Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi262724.TTC1321.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi19 – 235
Beta strandi29 – 3810
Beta strandi40 – 434
Helixi44 – 5714
Beta strandi58 – 603
Beta strandi63 – 664
Beta strandi72 – 754
Beta strandi82 – 854
Beta strandi93 – 975
Beta strandi102 – 1098
Helixi111 – 12212
Beta strandi125 – 1273
Beta strandi129 – 1324

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71K1-141[»]
1VSPX-ray3.83K1-141[»]
3D5BX-ray3.21Q1-141[»]
3D5DX-ray3.21Q1-141[»]
3F1FX-ray3.00Q1-141[»]
3F1HX-ray3.00Q1-141[»]
3MRZX-ray3.62M1-141[»]
3MS1X-ray3.62M1-141[»]
3PYOX-ray3.50M6-141[»]
3PYRX-ray3.50M6-141[»]
3PYTX-ray3.40M6-141[»]
3PYVX-ray3.40M6-141[»]
4KBUX-ray3.86Q1-141[»]
4KBWX-ray3.86Q1-141[»]
4KCZX-ray3.50Q1-141[»]
4KD2X-ray3.50Q1-141[»]
4KD9X-ray3.50Q1-141[»]
4KDBX-ray3.50Q1-141[»]
4KDHX-ray4.00Q1-141[»]
4KDKX-ray4.00Q1-141[»]
4KFIX-ray3.40Q6-139[»]
4KFLX-ray3.40Q6-139[»]
4L6JX-ray3.40M6-139[»]
4L6LX-ray3.40M6-139[»]
ProteinModelPortaliQ72I11.
SMRiQ72I11. Positions 1-137.

Miscellaneous databases

EvolutionaryTraceiQ72I11.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0197.
KOiK02878.
OMAiWISARQI.
OrthoDBiEOG6WHNWS.

Family and domain databases

Gene3Di3.90.1170.10. 1 hit.
HAMAPiMF_01342. Ribosomal_L16.
InterProiIPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
[Graphical view]
PANTHERiPTHR12220. PTHR12220. 1 hit.
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
PRINTSiPR00060. RIBOSOMALL16.
SUPFAMiSSF54686. SSF54686. 1 hit.
TIGRFAMsiTIGR01164. rplP_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Q72I11-1 [UniParc]FASTAAdd to Basket

« Hide

MLMPRRMKYR KQQRGRLKGA TKGGDYVAFG DFGLVALEPA WITAQQIEAA    50
RVAMVRHFRR GGKIFIRIFP DKPYTKKPLE VRMGKGKGNV EGYVAVVKPG 100
RVMFEVAGVT EEQAMEALRI AGHKLPIKTK IVRRDAYDEA Q 141
Length:141
Mass (Da):15,947
Last modified:July 5, 2004 - v1
Checksum:i3F08CF3788DCBF38
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81663.1.
RefSeqiWP_011173709.1. NC_005835.1.
YP_005290.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81663; AAS81663; TT_C1321.
GeneIDi2775155.
KEGGitth:TTC1321.
PATRICi23953049. VBITheThe54392_1313.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81663.1 .
RefSeqi WP_011173709.1. NC_005835.1.
YP_005290.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 K 1-141 [» ]
1VSP X-ray 3.83 K 1-141 [» ]
3D5B X-ray 3.21 Q 1-141 [» ]
3D5D X-ray 3.21 Q 1-141 [» ]
3F1F X-ray 3.00 Q 1-141 [» ]
3F1H X-ray 3.00 Q 1-141 [» ]
3MRZ X-ray 3.62 M 1-141 [» ]
3MS1 X-ray 3.62 M 1-141 [» ]
3PYO X-ray 3.50 M 6-141 [» ]
3PYR X-ray 3.50 M 6-141 [» ]
3PYT X-ray 3.40 M 6-141 [» ]
3PYV X-ray 3.40 M 6-141 [» ]
4KBU X-ray 3.86 Q 1-141 [» ]
4KBW X-ray 3.86 Q 1-141 [» ]
4KCZ X-ray 3.50 Q 1-141 [» ]
4KD2 X-ray 3.50 Q 1-141 [» ]
4KD9 X-ray 3.50 Q 1-141 [» ]
4KDB X-ray 3.50 Q 1-141 [» ]
4KDH X-ray 4.00 Q 1-141 [» ]
4KDK X-ray 4.00 Q 1-141 [» ]
4KFI X-ray 3.40 Q 6-139 [» ]
4KFL X-ray 3.40 Q 6-139 [» ]
4L6J X-ray 3.40 M 6-139 [» ]
4L6L X-ray 3.40 M 6-139 [» ]
ProteinModelPortali Q72I11.
SMRi Q72I11. Positions 1-137.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC1321.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81663 ; AAS81663 ; TT_C1321 .
GeneIDi 2775155.
KEGGi tth:TTC1321.
PATRICi 23953049. VBITheThe54392_1313.

Phylogenomic databases

eggNOGi COG0197.
KOi K02878.
OMAi WISARQI.
OrthoDBi EOG6WHNWS.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1336-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72I11.

Family and domain databases

Gene3Di 3.90.1170.10. 1 hit.
HAMAPi MF_01342. Ribosomal_L16.
InterProi IPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
[Graphical view ]
PANTHERi PTHR12220. PTHR12220. 1 hit.
Pfami PF00252. Ribosomal_L16. 1 hit.
[Graphical view ]
PRINTSi PR00060. RIBOSOMALL16.
SUPFAMi SSF54686. SSF54686. 1 hit.
TIGRFAMsi TIGR01164. rplP_bact. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL16_THET2
AccessioniPrimary (citable) accession number: Q72I11
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: July 5, 2004
Last modified: September 3, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi