Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q72HR3

- RL27_THET2

UniProt

Q72HR3 - RL27_THET2

Protein

50S ribosomal protein L27

Gene

rpmA

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1441-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L27UniRule annotation
    Gene namesi
    Name:rpmAUniRule annotation
    Ordered Locus Names:TT_C1423
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 858450S ribosomal protein L27PRO_0000181193Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi262724.TTC1423.

    Structurei

    Secondary structure

    1
    85
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi22 – 254
    Beta strandi27 – 348
    Beta strandi36 – 394
    Beta strandi41 – 466
    Beta strandi51 – 533
    Turni55 – 573
    Beta strandi59 – 7113
    Turni73 – 753
    Beta strandi77 – 826

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1VSAX-ray3.71U1-85[»]
    1VSPX-ray3.83U1-85[»]
    3D5BX-ray3.2101-85[»]
    3D5DX-ray3.2101-85[»]
    3F1FX-ray3.0001-85[»]
    3F1HX-ray3.0001-85[»]
    3MRZX-ray3.62W2-85[»]
    3MS1X-ray3.62W2-85[»]
    3PYOX-ray3.50W10-85[»]
    3PYRX-ray3.50W10-85[»]
    3PYTX-ray3.40W10-85[»]
    3PYVX-ray3.40W10-85[»]
    4KBUX-ray3.8602-85[»]
    4KBWX-ray3.8602-85[»]
    4KCZX-ray3.5002-85[»]
    4KD2X-ray3.5002-85[»]
    4KD9X-ray3.5002-85[»]
    4KDBX-ray3.5002-85[»]
    4KDHX-ray4.0002-85[»]
    4KDKX-ray4.0002-85[»]
    4KFIX-ray3.40010-85[»]
    4KFLX-ray3.40010-85[»]
    4L6JX-ray3.40W10-85[»]
    4L6LX-ray3.40W10-85[»]
    ProteinModelPortaliQ72HR3.
    SMRiQ72HR3. Positions 10-85.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ72HR3.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L27P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0211.
    KOiK02899.
    OMAiCERINAV.
    OrthoDBiEOG6N94H6.

    Family and domain databases

    HAMAPiMF_00539. Ribosomal_L27.
    InterProiIPR001684. Ribosomal_L27.
    IPR018261. Ribosomal_L27_CS.
    [Graphical view]
    PANTHERiPTHR15893. PTHR15893. 1 hit.
    PfamiPF01016. Ribosomal_L27. 1 hit.
    [Graphical view]
    PRINTSiPR00063. RIBOSOMALL27.
    ProDomiPD003114. Ribosomal_L27. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    TIGRFAMsiTIGR00062. L27. 1 hit.
    PROSITEiPS00831. RIBOSOMAL_L27. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q72HR3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAHKKGLGST KNGRDSQAKR LGVKRYEGQV VRAGNILVRQ RGTRFKPGKN   50
    VGMGRDFTLF ALVDGVVEFQ DRGRLGRYVH VRPLA 85
    Length:85
    Mass (Da):9,480
    Last modified:January 23, 2007 - v3
    Checksum:i7F0477004B83A515
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81765.1.
    RefSeqiYP_005392.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS81765; AAS81765; TT_C1423.
    GeneIDi2775390.
    KEGGitth:TTC1423.
    PATRICi23953263. VBITheThe54392_1417.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS81765.1 .
    RefSeqi YP_005392.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1VSA X-ray 3.71 U 1-85 [» ]
    1VSP X-ray 3.83 U 1-85 [» ]
    3D5B X-ray 3.21 0 1-85 [» ]
    3D5D X-ray 3.21 0 1-85 [» ]
    3F1F X-ray 3.00 0 1-85 [» ]
    3F1H X-ray 3.00 0 1-85 [» ]
    3MRZ X-ray 3.62 W 2-85 [» ]
    3MS1 X-ray 3.62 W 2-85 [» ]
    3PYO X-ray 3.50 W 10-85 [» ]
    3PYR X-ray 3.50 W 10-85 [» ]
    3PYT X-ray 3.40 W 10-85 [» ]
    3PYV X-ray 3.40 W 10-85 [» ]
    4KBU X-ray 3.86 0 2-85 [» ]
    4KBW X-ray 3.86 0 2-85 [» ]
    4KCZ X-ray 3.50 0 2-85 [» ]
    4KD2 X-ray 3.50 0 2-85 [» ]
    4KD9 X-ray 3.50 0 2-85 [» ]
    4KDB X-ray 3.50 0 2-85 [» ]
    4KDH X-ray 4.00 0 2-85 [» ]
    4KDK X-ray 4.00 0 2-85 [» ]
    4KFI X-ray 3.40 0 10-85 [» ]
    4KFL X-ray 3.40 0 10-85 [» ]
    4L6J X-ray 3.40 W 10-85 [» ]
    4L6L X-ray 3.40 W 10-85 [» ]
    ProteinModelPortali Q72HR3.
    SMRi Q72HR3. Positions 10-85.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC1423.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS81765 ; AAS81765 ; TT_C1423 .
    GeneIDi 2775390.
    KEGGi tth:TTC1423.
    PATRICi 23953263. VBITheThe54392_1417.

    Phylogenomic databases

    eggNOGi COG0211.
    KOi K02899.
    OMAi CERINAV.
    OrthoDBi EOG6N94H6.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1441-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q72HR3.

    Family and domain databases

    HAMAPi MF_00539. Ribosomal_L27.
    InterProi IPR001684. Ribosomal_L27.
    IPR018261. Ribosomal_L27_CS.
    [Graphical view ]
    PANTHERi PTHR15893. PTHR15893. 1 hit.
    Pfami PF01016. Ribosomal_L27. 1 hit.
    [Graphical view ]
    PRINTSi PR00063. RIBOSOMALL27.
    ProDomi PD003114. Ribosomal_L27. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    TIGRFAMsi TIGR00062. L27. 1 hit.
    PROSITEi PS00831. RIBOSOMAL_L27. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL27_THET2
    AccessioniPrimary (citable) accession number: Q72HR3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 7, 2005
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 72 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3