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Q72HR3 (RL27_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L27
Gene names
Name:rpmA
Ordered Locus Names:TT_C1423
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length85 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L27P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 858450S ribosomal protein L27 HAMAP-Rule MF_00539
PRO_0000181193

Secondary structure

................... 85
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q72HR3 [UniParc].

Last modified January 23, 2007. Version 3.
Checksum: 7F0477004B83A515

FASTA859,480
        10         20         30         40         50         60 
MAHKKGLGST KNGRDSQAKR LGVKRYEGQV VRAGNILVRQ RGTRFKPGKN VGMGRDFTLF 

        70         80 
ALVDGVVEFQ DRGRLGRYVH VRPLA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS81765.1.
RefSeqYP_005392.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71U1-85[»]
1VSPX-ray3.83U1-85[»]
3D5BX-ray3.2101-85[»]
3D5DX-ray3.2101-85[»]
3F1FX-ray3.0001-85[»]
3F1HX-ray3.0001-85[»]
3MRZX-ray3.62W2-85[»]
3MS1X-ray3.62W2-85[»]
3PYOX-ray3.50W10-85[»]
3PYRX-ray3.50W10-85[»]
3PYTX-ray3.40W10-85[»]
3PYVX-ray3.40W10-85[»]
4KBUX-ray3.8602-85[»]
4KBWX-ray3.8602-85[»]
4KCZX-ray3.5002-85[»]
4KD2X-ray3.5002-85[»]
4KD9X-ray3.5002-85[»]
4KDBX-ray3.5002-85[»]
4KDHX-ray4.0002-85[»]
4KDKX-ray4.0002-85[»]
4KFIX-ray3.40010-85[»]
4KFLX-ray3.40010-85[»]
4L6JX-ray3.40W10-85[»]
4L6LX-ray3.40W10-85[»]
ProteinModelPortalQ72HR3.
SMRQ72HR3. Positions 10-85.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC1423.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS81765; AAS81765; TT_C1423.
GeneID2775390.
KEGGtth:TTC1423.
PATRIC23953263. VBITheThe54392_1417.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0211.
KOK02899.
OMAKDHTLHA.
OrthoDBEOG6N94H6.
ProtClustDBPRK05435.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1441-MONOMER.

Family and domain databases

HAMAPMF_00539. Ribosomal_L27.
InterProIPR001684. Ribosomal_L27.
IPR018261. Ribosomal_L27_CS.
[Graphical view]
PANTHERPTHR15893. PTHR15893. 1 hit.
PfamPF01016. Ribosomal_L27. 1 hit.
[Graphical view]
PRINTSPR00063. RIBOSOMALL27.
ProDomPD003114. Ribosomal_L27. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR00062. L27. 1 hit.
PROSITEPS00831. RIBOSOMAL_L27. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ72HR3.

Entry information

Entry nameRL27_THET2
AccessionPrimary (citable) accession number: Q72HR3
Entry history
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: January 23, 2007
Last modified: February 19, 2014
This is version 70 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references