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Q72HR3

- RL27_THET2

UniProt

Q72HR3 - RL27_THET2

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Protein

50S ribosomal protein L27

Gene

rpmA

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1441-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L27UniRule annotation
Gene namesi
Name:rpmAUniRule annotation
Ordered Locus Names:TT_C1423
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 858450S ribosomal protein L27PRO_0000181193Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC1423.

Structurei

Secondary structure

1
85
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi22 – 254
Beta strandi27 – 348
Beta strandi36 – 394
Beta strandi41 – 466
Beta strandi51 – 533
Turni55 – 573
Beta strandi59 – 7113
Turni73 – 753
Beta strandi77 – 826

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71U1-85[»]
1VSPX-ray3.83U1-85[»]
3D5BX-ray3.2101-85[»]
3D5DX-ray3.2101-85[»]
3F1FX-ray3.0001-85[»]
3F1HX-ray3.0001-85[»]
3MRZX-ray3.62W2-85[»]
3MS1X-ray3.62W2-85[»]
3PYOX-ray3.50W10-85[»]
3PYRX-ray3.50W10-85[»]
3PYTX-ray3.40W10-85[»]
3PYVX-ray3.40W10-85[»]
4KBUX-ray3.8602-85[»]
4KBWX-ray3.8602-85[»]
4KCZX-ray3.5002-85[»]
4KD2X-ray3.5002-85[»]
4KD9X-ray3.5002-85[»]
4KDBX-ray3.5002-85[»]
4KDHX-ray4.0002-85[»]
4KDKX-ray4.0002-85[»]
4KFIX-ray3.40010-85[»]
4KFLX-ray3.40010-85[»]
4L6JX-ray3.40W10-85[»]
4L6LX-ray3.40W10-85[»]
ProteinModelPortaliQ72HR3.
SMRiQ72HR3. Positions 10-85.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72HR3.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L27P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0211.
KOiK02899.
OMAiCERINAV.
OrthoDBiEOG6N94H6.

Family and domain databases

HAMAPiMF_00539. Ribosomal_L27.
InterProiIPR001684. Ribosomal_L27.
IPR018261. Ribosomal_L27_CS.
[Graphical view]
PANTHERiPTHR15893. PTHR15893. 1 hit.
PfamiPF01016. Ribosomal_L27. 1 hit.
[Graphical view]
PRINTSiPR00063. RIBOSOMALL27.
ProDomiPD003114. Ribosomal_L27. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00062. L27. 1 hit.
PROSITEiPS00831. RIBOSOMAL_L27. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q72HR3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAHKKGLGST KNGRDSQAKR LGVKRYEGQV VRAGNILVRQ RGTRFKPGKN
60 70 80
VGMGRDFTLF ALVDGVVEFQ DRGRLGRYVH VRPLA
Length:85
Mass (Da):9,480
Last modified:January 23, 2007 - v3
Checksum:i7F0477004B83A515
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81765.1.
RefSeqiYP_005392.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS81765; AAS81765; TT_C1423.
GeneIDi2775390.
KEGGitth:TTC1423.
PATRICi23953263. VBITheThe54392_1417.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS81765.1 .
RefSeqi YP_005392.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 U 1-85 [» ]
1VSP X-ray 3.83 U 1-85 [» ]
3D5B X-ray 3.21 0 1-85 [» ]
3D5D X-ray 3.21 0 1-85 [» ]
3F1F X-ray 3.00 0 1-85 [» ]
3F1H X-ray 3.00 0 1-85 [» ]
3MRZ X-ray 3.62 W 2-85 [» ]
3MS1 X-ray 3.62 W 2-85 [» ]
3PYO X-ray 3.50 W 10-85 [» ]
3PYR X-ray 3.50 W 10-85 [» ]
3PYT X-ray 3.40 W 10-85 [» ]
3PYV X-ray 3.40 W 10-85 [» ]
4KBU X-ray 3.86 0 2-85 [» ]
4KBW X-ray 3.86 0 2-85 [» ]
4KCZ X-ray 3.50 0 2-85 [» ]
4KD2 X-ray 3.50 0 2-85 [» ]
4KD9 X-ray 3.50 0 2-85 [» ]
4KDB X-ray 3.50 0 2-85 [» ]
4KDH X-ray 4.00 0 2-85 [» ]
4KDK X-ray 4.00 0 2-85 [» ]
4KFI X-ray 3.40 0 10-85 [» ]
4KFL X-ray 3.40 0 10-85 [» ]
4L6J X-ray 3.40 W 10-85 [» ]
4L6L X-ray 3.40 W 10-85 [» ]
ProteinModelPortali Q72HR3.
SMRi Q72HR3. Positions 10-85.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC1423.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS81765 ; AAS81765 ; TT_C1423 .
GeneIDi 2775390.
KEGGi tth:TTC1423.
PATRICi 23953263. VBITheThe54392_1417.

Phylogenomic databases

eggNOGi COG0211.
KOi K02899.
OMAi CERINAV.
OrthoDBi EOG6N94H6.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1441-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72HR3.

Family and domain databases

HAMAPi MF_00539. Ribosomal_L27.
InterProi IPR001684. Ribosomal_L27.
IPR018261. Ribosomal_L27_CS.
[Graphical view ]
PANTHERi PTHR15893. PTHR15893. 1 hit.
Pfami PF01016. Ribosomal_L27. 1 hit.
[Graphical view ]
PRINTSi PR00063. RIBOSOMALL27.
ProDomi PD003114. Ribosomal_L27. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
TIGRFAMsi TIGR00062. L27. 1 hit.
PROSITEi PS00831. RIBOSOMAL_L27. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL27_THET2
AccessioniPrimary (citable) accession number: Q72HR3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: January 23, 2007
Last modified: October 1, 2014
This is version 72 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3