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Protein

50S ribosomal protein L33

Gene

rpmG

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1772-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L33UniRule annotation
Gene namesi
Name:rpmGUniRule annotation
Ordered Locus Names:TT_C1735
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 545450S ribosomal protein L33PRO_1000004207Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC1735.

Structurei

Secondary structure

1
54
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Turni6 – 83Combined sources
Beta strandi10 – 123Combined sources
Beta strandi16 – 183Combined sources
Beta strandi23 – 253Combined sources
Turni28 – 314Combined sources
Beta strandi42 – 454Combined sources
Beta strandi47 – 504Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V63X-ray3.21B6/D61-54[»]
4V67X-ray3.00B6/D61-54[»]
4V7PX-ray3.62B3/C31-54[»]
4V83X-ray3.50B3/D39-52[»]
4V84X-ray3.40B3/D39-52[»]
4V9JX-ray3.86B6/D65-54[»]
4V9KX-ray3.50B6/D65-54[»]
4V9LX-ray3.50B6/D65-54[»]
4V9MX-ray4.00B6/D65-54[»]
4V9NX-ray3.40B6/D69-52[»]
4V9QX-ray3.40A3/C39-52[»]
4W29X-ray3.80B6/D65-54[»]
4XEJX-ray3.80AL33/BL339-52[»]
ProteinModelPortaliQ72GW3.
SMRiQ72GW3. Positions 6-54.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72GW3.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L33P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0267.
KOiK02913.
OMAiLELAKFC.
OrthoDBiEOG60KNBM.

Family and domain databases

HAMAPiMF_00294. Ribosomal_L33.
InterProiIPR001705. Ribosomal_L33.
IPR018264. Ribosomal_L33_CS.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF00471. Ribosomal_L33. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR01023. rpmG_bact. 1 hit.
PROSITEiPS00582. RIBOSOMAL_L33. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72GW3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASEVRIKLL LECTECKRRN YATEKNKRNT PNKLELRKYC PWCRKHTVHR

EVKI
Length:54
Mass (Da):6,616
Last modified:July 5, 2004 - v1
Checksum:i13DC56C3247C60CD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS82077.1.
RefSeqiYP_005704.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS82077; AAS82077; TT_C1735.
KEGGitth:TTC1735.
PATRICi23953935. VBITheThe54392_1734.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS82077.1.
RefSeqiYP_005704.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V63X-ray3.21B6/D61-54[»]
4V67X-ray3.00B6/D61-54[»]
4V7PX-ray3.62B3/C31-54[»]
4V83X-ray3.50B3/D39-52[»]
4V84X-ray3.40B3/D39-52[»]
4V9JX-ray3.86B6/D65-54[»]
4V9KX-ray3.50B6/D65-54[»]
4V9LX-ray3.50B6/D65-54[»]
4V9MX-ray4.00B6/D65-54[»]
4V9NX-ray3.40B6/D69-52[»]
4V9QX-ray3.40A3/C39-52[»]
4W29X-ray3.80B6/D65-54[»]
4XEJX-ray3.80AL33/BL339-52[»]
ProteinModelPortaliQ72GW3.
SMRiQ72GW3. Positions 6-54.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262724.TTC1735.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS82077; AAS82077; TT_C1735.
KEGGitth:TTC1735.
PATRICi23953935. VBITheThe54392_1734.

Phylogenomic databases

eggNOGiCOG0267.
KOiK02913.
OMAiLELAKFC.
OrthoDBiEOG60KNBM.

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1772-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ72GW3.

Family and domain databases

HAMAPiMF_00294. Ribosomal_L33.
InterProiIPR001705. Ribosomal_L33.
IPR018264. Ribosomal_L33_CS.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF00471. Ribosomal_L33. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR01023. rpmG_bact. 1 hit.
PROSITEiPS00582. RIBOSOMAL_L33. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL33_THET2
AccessioniPrimary (citable) accession number: Q72GW3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: July 5, 2004
Last modified: April 29, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.