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Q72GV5 (RL9_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L9
Gene names
Name:rplI
Ordered Locus Names:TT_C1743
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus ›

Protein attributes

Sequence length148 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Binds to the 23S rRNA By similarity.

Sequence similarities

Belongs to the ribosomal protein L9P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 14814850S ribosomal protein L9 HAMAP-Rule MF_00503
PRO_0000236610

Secondary structure

1 ............................ 148
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q72GV5 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: B81EF336C0506A2F

FASTA14816,411
        10         20         30         40         50         60 
MKVILLEPLE NLGDVGQVVD VKPGYARNYL LPRGLAVLAT ESNLKALEAR IRAQAKRLAE 

        70         80         90        100        110        120 
RKAEAERLKE ILENLTLTIP VRAGETKIYG SVTAKDIAEA LSRQHGITID PKRLALEKPI 

       130        140 
KELGEYVLTY KPHPEVPIQL KVSVVAQE

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE017221 Genomic DNA. Translation: AAS82085.1.
RefSeqYP_005712.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71G1-148[»]
1VSPX-ray3.83G1-148[»]
3D5BX-ray3.21I1-148[»]
3D5DX-ray3.21I1-148[»]
3MRZX-ray3.62H1-148[»]
3MS1X-ray3.62H1-148[»]
3PYOX-ray3.50H1-145[»]
3PYRX-ray3.50H1-145[»]
3PYTX-ray3.40H1-145[»]
3PYVX-ray3.40H1-145[»]
ProteinModelPortalQ72GV5.
SMRQ72GV5. Positions 1-148.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS82085; AAS82085; TT_C1743.
GeneID2775355.
KEGGtth:TTC1743.
PATRIC23953953. VBITheThe54392_1742.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0359.
KOK02939.
OMATGIYEIE.
ProtClustDBPRK00137.

Family and domain databases

Gene3D3.10.430.100. 1 hit.
3.40.5.10. 1 hit.
HAMAPMF_00503. Ribosomal_L9.
InterProIPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020594. Ribosomal_L9_bac/chp.
IPR020069. Ribosomal_L9_C.
IPR020070. Ribosomal_L9_N.
[Graphical view]
PANTHERPTHR21368. PTHR21368. 1 hit.
PfamPF03948. Ribosomal_L9_C. 1 hit.
PF01281. Ribosomal_L9_N. 1 hit.
[Graphical view]
SUPFAMSSF55658. L9_N_like. 1 hit.
SSF55653. Ribosomal_L9. 1 hit.
TIGRFAMsTIGR00158. L9. 1 hit.
PROSITEPS00651. RIBOSOMAL_L9. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ72GV5.

Entry information

Entry nameRL9_THET2
AccessionPrimary (citable) accession number: Q72GV5
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: July 5, 2004
Last modified: May 1, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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