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Q72GV5

- RL9_THET2

UniProt

Q72GV5 - RL9_THET2

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Protein
50S ribosomal protein L9
Gene
rplI, TT_C1743
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1781-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L9
Gene namesi
Name:rplI
Ordered Locus Names:TT_C1743
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14814850S ribosomal protein L9UniRule annotation
PRO_0000236610Add
BLAST

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi2 – 54
Turni10 – 123
Beta strandi18 – 203
Helixi23 – 275
Turni28 – 347
Beta strandi35 – 384
Helixi41 – 5919
Helixi61 – 644
Helixi67 – 715
Beta strandi72 – 743
Beta strandi77 – 793
Beta strandi83 – 908
Helixi95 – 1039
Turni111 – 1133
Beta strandi130 – 1334
Beta strandi136 – 1383

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71G1-148[»]
1VSPX-ray3.83G1-148[»]
3D5BX-ray3.21I1-148[»]
3D5DX-ray3.21I1-148[»]
3MRZX-ray3.62H1-148[»]
3MS1X-ray3.62H1-148[»]
3PYOX-ray3.50H1-145[»]
3PYRX-ray3.50H1-145[»]
3PYTX-ray3.40H1-145[»]
3PYVX-ray3.40H1-145[»]
4KFIX-ray3.40I1-145[»]
4KFLX-ray3.40I1-145[»]
4L6JX-ray3.40I1-145[»]
4L6LX-ray3.40I1-145[»]
ProteinModelPortaliQ72GV5.
SMRiQ72GV5. Positions 1-148.

Miscellaneous databases

EvolutionaryTraceiQ72GV5.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0359.
KOiK02939.
OMAiSNKHNID.
OrthoDBiEOG6D8BH0.

Family and domain databases

Gene3Di3.10.430.100. 1 hit.
3.40.5.10. 1 hit.
HAMAPiMF_00503. Ribosomal_L9.
InterProiIPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020594. Ribosomal_L9_bac/chp.
IPR020069. Ribosomal_L9_C.
IPR020070. Ribosomal_L9_N.
[Graphical view]
PANTHERiPTHR21368. PTHR21368. 1 hit.
PfamiPF03948. Ribosomal_L9_C. 1 hit.
PF01281. Ribosomal_L9_N. 1 hit.
[Graphical view]
SUPFAMiSSF55653. SSF55653. 1 hit.
SSF55658. SSF55658. 1 hit.
TIGRFAMsiTIGR00158. L9. 1 hit.
PROSITEiPS00651. RIBOSOMAL_L9. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72GV5-1 [UniParc]FASTAAdd to Basket

« Hide

MKVILLEPLE NLGDVGQVVD VKPGYARNYL LPRGLAVLAT ESNLKALEAR    50
IRAQAKRLAE RKAEAERLKE ILENLTLTIP VRAGETKIYG SVTAKDIAEA 100
LSRQHGITID PKRLALEKPI KELGEYVLTY KPHPEVPIQL KVSVVAQE 148
Length:148
Mass (Da):16,411
Last modified:July 5, 2004 - v1
Checksum:iB81EF336C0506A2F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS82085.1.
RefSeqiWP_011174101.1. NC_005835.1.
YP_005712.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS82085; AAS82085; TT_C1743.
GeneIDi2775355.
KEGGitth:TTC1743.
PATRICi23953953. VBITheThe54392_1742.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS82085.1 .
RefSeqi WP_011174101.1. NC_005835.1.
YP_005712.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1VSA X-ray 3.71 G 1-148 [» ]
1VSP X-ray 3.83 G 1-148 [» ]
3D5B X-ray 3.21 I 1-148 [» ]
3D5D X-ray 3.21 I 1-148 [» ]
3MRZ X-ray 3.62 H 1-148 [» ]
3MS1 X-ray 3.62 H 1-148 [» ]
3PYO X-ray 3.50 H 1-145 [» ]
3PYR X-ray 3.50 H 1-145 [» ]
3PYT X-ray 3.40 H 1-145 [» ]
3PYV X-ray 3.40 H 1-145 [» ]
4KFI X-ray 3.40 I 1-145 [» ]
4KFL X-ray 3.40 I 1-145 [» ]
4L6J X-ray 3.40 I 1-145 [» ]
4L6L X-ray 3.40 I 1-145 [» ]
ProteinModelPortali Q72GV5.
SMRi Q72GV5. Positions 1-148.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS82085 ; AAS82085 ; TT_C1743 .
GeneIDi 2775355.
KEGGi tth:TTC1743.
PATRICi 23953953. VBITheThe54392_1742.

Phylogenomic databases

eggNOGi COG0359.
KOi K02939.
OMAi SNKHNID.
OrthoDBi EOG6D8BH0.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1781-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72GV5.

Family and domain databases

Gene3Di 3.10.430.100. 1 hit.
3.40.5.10. 1 hit.
HAMAPi MF_00503. Ribosomal_L9.
InterProi IPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020594. Ribosomal_L9_bac/chp.
IPR020069. Ribosomal_L9_C.
IPR020070. Ribosomal_L9_N.
[Graphical view ]
PANTHERi PTHR21368. PTHR21368. 1 hit.
Pfami PF03948. Ribosomal_L9_C. 1 hit.
PF01281. Ribosomal_L9_N. 1 hit.
[Graphical view ]
SUPFAMi SSF55653. SSF55653. 1 hit.
SSF55658. SSF55658. 1 hit.
TIGRFAMsi TIGR00158. L9. 1 hit.
PROSITEi PS00651. RIBOSOMAL_L9. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL9_THET2
AccessioniPrimary (citable) accession number: Q72GV5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: July 5, 2004
Last modified: September 3, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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