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Q72GS1

- RL10_THET2

UniProt

Q72GS1 - RL10_THET2

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Protein
50S ribosomal protein L10
Gene
rplJ, TT_C1777
Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors By similarity.UniRule annotation

GO - Molecular functioni

  1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. ribosome biogenesis Source: InterPro
  2. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE262724:GCAT-1815-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L10
Gene namesi
Name:rplJ
Ordered Locus Names:TT_C1777
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000592: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 17317350S ribosomal protein L10UniRule annotation
PRO_0000154735Add
BLAST

Interactioni

Subunit structurei

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.

Protein-protein interaction databases

STRINGi262724.TTC1777.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi4 – 74
Turni8 – 125
Helixi13 – 186
Helixi57 – 648

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3D5BX-ray3.21J1-173[»]
3D5DX-ray3.21J1-173[»]
3MRZX-ray3.62I1-173[»]
3MS1X-ray3.62I1-173[»]
3PYOX-ray3.50I3-67[»]
3PYRX-ray3.50I3-67[»]
3PYTX-ray3.40I3-67[»]
3PYVX-ray3.40I3-67[»]
ProteinModelPortaliQ72GS1.

Miscellaneous databases

EvolutionaryTraceiQ72GS1.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0244.
KOiK02864.
OrthoDBiEOG6DNTDR.

Family and domain databases

HAMAPiMF_00362. Ribosomal_L10.
InterProiIPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
[Graphical view]
PfamiPF00466. Ribosomal_L10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72GS1-1 [UniParc]FASTAAdd to Basket

« Hide

MPNKRNVELL ATLKENLERA QGSFFLVNYQ GLPAKETHAL RQALKQNGAR    50
LFVAKNTLIR LALKELGLPE LDGLQGPSAV VFYEDPVAAA KTLVQFAKSN 100
PKGIPQVKSG LLQGQILTAK DVEALAELPT MDELRAELVG VLQAPMAELV 150
GVLGGVAREL VGILEAYAEK KAA 173
Length:173
Mass (Da):18,566
Last modified:July 5, 2004 - v1
Checksum:i266CF72B036C6D5F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS82119.1.
RefSeqiYP_005746.1. NC_005835.1.

Genome annotation databases

EnsemblBacteriaiAAS82119; AAS82119; TT_C1777.
GeneIDi2774754.
KEGGitth:TTC1777.
PATRICi23954023. VBITheThe54392_1777.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017221 Genomic DNA. Translation: AAS82119.1 .
RefSeqi YP_005746.1. NC_005835.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3D5B X-ray 3.21 J 1-173 [» ]
3D5D X-ray 3.21 J 1-173 [» ]
3MRZ X-ray 3.62 I 1-173 [» ]
3MS1 X-ray 3.62 I 1-173 [» ]
3PYO X-ray 3.50 I 3-67 [» ]
3PYR X-ray 3.50 I 3-67 [» ]
3PYT X-ray 3.40 I 3-67 [» ]
3PYV X-ray 3.40 I 3-67 [» ]
ProteinModelPortali Q72GS1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262724.TTC1777.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS82119 ; AAS82119 ; TT_C1777 .
GeneIDi 2774754.
KEGGi tth:TTC1777.
PATRICi 23954023. VBITheThe54392_1777.

Phylogenomic databases

eggNOGi COG0244.
KOi K02864.
OrthoDBi EOG6DNTDR.

Enzyme and pathway databases

BioCyci TTHE262724:GCAT-1815-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q72GS1.

Family and domain databases

HAMAPi MF_00362. Ribosomal_L10.
InterProi IPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
[Graphical view ]
Pfami PF00466. Ribosomal_L10. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB27 / ATCC BAA-163 / DSM 7039.

Entry informationi

Entry nameiRL10_THET2
AccessioniPrimary (citable) accession number: Q72GS1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi