50S ribosomal protein L10 - Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)

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Q72GS1 (RL10_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 52. History...

Clusters with 100%, 90%, 50% identity |

Documents (3) |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
50S ribosomal protein L10

Gene names

Name:	rplJ
Ordered Locus Names:	TT_C1777

Organism

Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus ›

Protein attributes

Sequence length	173 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L10P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	3D-structure Complete proteome
Gene Ontology (GO)
Biological_process	ribosome biogenesis Inferred from electronic annotation. Source: InterPro translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

173

50S ribosomal protein L10 HAMAP-Rule MF_00362

PRO_0000154735

Secondary structure

1

.

.

.

.

.

.

.

173

Helix Strand Turn

Sequences

Sequence

Length

Mass (Da)

Tools

Q72GS1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 266CF72B036C6D5F
Show »

173

18,566

        10         20         30         40         50         60 
MPNKRNVELL ATLKENLERA QGSFFLVNYQ GLPAKETHAL RQALKQNGAR LFVAKNTLIR 

        70         80         90        100        110        120 
LALKELGLPE LDGLQGPSAV VFYEDPVAAA KTLVQFAKSN PKGIPQVKSG LLQGQILTAK 

       130        140        150        160        170 
DVEALAELPT MDELRAELVG VLQAPMAELV GVLGGVAREL VGILEAYAEK KAA

References

[1]

"The genome sequence of the extreme thermophile Thermus thermophilus."
Henne A., Brueggemann H., Raasch C., Wiezer A., Hartsch T., Liesegang H., Johann A., Lienard T., Gohl O., Martinez-Arias R., Jacobi C., Starkuviene V., Schlenczeck S., Dencker S., Huber R., Klenk H.-P., Kramer W., Merkl R., Gottschalk G., Fritz H.-J.
Nat. Biotechnol. 22:547-553(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HB27 / ATCC BAA-163 / DSM 7039.

+

Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE017221 Genomic DNA. Translation: AAS82119.1.

RefSeq

YP_005746.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3D5B	X-ray	3.21	J	1-173	[»]
3D5D	X-ray	3.21	J	1-173	[»]
3MRZ	X-ray	3.62	I	1-173	[»]
3MS1	X-ray	3.62	I	1-173	[»]
3PYO	X-ray	3.50	I	3-67	[»]
3PYR	X-ray	3.50	I	3-67	[»]
3PYT	X-ray	3.40	I	3-67	[»]
3PYV	X-ray	3.40	I	3-67	[»]

ProteinModelPortal

ModBase

Protein-protein interaction databases

STRING

262724.TTC1777.

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

AAS82119; AAS82119; TT_C1777.

GeneID

KEGG

PATRIC

23954023. VBITheThe54392_1777.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

KO

OMA

ProtClustDB

Family and domain databases

HAMAP

MF_00362. Ribosomal_L10.

InterPro

IPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
[Graphical view]

PANTHER

PTHR11560:SF8. PTHR11560:SF8. 1 hit.

Pfam

PF00466. Ribosomal_L10. 1 hit.
[Graphical view]

PROSITE

PS01109. RIBOSOMAL_L10. False negative.
[Graphical view]

ProtoNet

Other

EvolutionaryTrace

Entry information

Entry name

RL10_THET2

Accession

Primary (citable) accession number: Q72GS1

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 15, 2005
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents