Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q72GS1

- RL10_THET2

UniProt

Q72GS1 - RL10_THET2

Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.UniRule annotation

    GO - Molecular functioni

    1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro
    2. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1815-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L10UniRule annotation
    Gene namesi
    Name:rplJUniRule annotation
    Ordered Locus Names:TT_C1777
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 17317350S ribosomal protein L10PRO_0000154735Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

    Protein-protein interaction databases

    STRINGi262724.TTC1777.

    Structurei

    Secondary structure

    1
    173
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi4 – 74
    Turni8 – 125
    Helixi13 – 186
    Helixi57 – 648

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3D5BX-ray3.21J1-173[»]
    3D5DX-ray3.21J1-173[»]
    3MRZX-ray3.62I1-173[»]
    3MS1X-ray3.62I1-173[»]
    3PYOX-ray3.50I3-67[»]
    3PYRX-ray3.50I3-67[»]
    3PYTX-ray3.40I3-67[»]
    3PYVX-ray3.40I3-67[»]
    ProteinModelPortaliQ72GS1.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ72GS1.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0244.
    KOiK02864.
    OrthoDBiEOG6DNTDR.

    Family and domain databases

    HAMAPiMF_00362. Ribosomal_L10.
    InterProiIPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    [Graphical view]
    PfamiPF00466. Ribosomal_L10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q72GS1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPNKRNVELL ATLKENLERA QGSFFLVNYQ GLPAKETHAL RQALKQNGAR    50
    LFVAKNTLIR LALKELGLPE LDGLQGPSAV VFYEDPVAAA KTLVQFAKSN 100
    PKGIPQVKSG LLQGQILTAK DVEALAELPT MDELRAELVG VLQAPMAELV 150
    GVLGGVAREL VGILEAYAEK KAA 173
    Length:173
    Mass (Da):18,566
    Last modified:July 5, 2004 - v1
    Checksum:i266CF72B036C6D5F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS82119.1.
    RefSeqiYP_005746.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS82119; AAS82119; TT_C1777.
    GeneIDi2774754.
    KEGGitth:TTC1777.
    PATRICi23954023. VBITheThe54392_1777.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS82119.1 .
    RefSeqi YP_005746.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3D5B X-ray 3.21 J 1-173 [» ]
    3D5D X-ray 3.21 J 1-173 [» ]
    3MRZ X-ray 3.62 I 1-173 [» ]
    3MS1 X-ray 3.62 I 1-173 [» ]
    3PYO X-ray 3.50 I 3-67 [» ]
    3PYR X-ray 3.50 I 3-67 [» ]
    3PYT X-ray 3.40 I 3-67 [» ]
    3PYV X-ray 3.40 I 3-67 [» ]
    ProteinModelPortali Q72GS1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262724.TTC1777.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS82119 ; AAS82119 ; TT_C1777 .
    GeneIDi 2774754.
    KEGGi tth:TTC1777.
    PATRICi 23954023. VBITheThe54392_1777.

    Phylogenomic databases

    eggNOGi COG0244.
    KOi K02864.
    OrthoDBi EOG6DNTDR.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1815-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q72GS1.

    Family and domain databases

    HAMAPi MF_00362. Ribosomal_L10.
    InterProi IPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    [Graphical view ]
    Pfami PF00466. Ribosomal_L10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL10_THET2
    AccessioniPrimary (citable) accession number: Q72GS1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 15, 2005
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3