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Q72GS1 (RL10_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L10
Gene names
Name:rplJ
Ordered Locus Names:TT_C1777
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length173 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors By similarity. HAMAP-Rule MF_00362

Subunit structure

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.

Sequence similarities

Belongs to the ribosomal protein L10P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processribosome biogenesis

Inferred from electronic annotation. Source: InterPro

translation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionLSU rRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 17317350S ribosomal protein L10 HAMAP-Rule MF_00362
PRO_0000154735

Secondary structure

....... 173
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q72GS1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 266CF72B036C6D5F

FASTA17318,566
        10         20         30         40         50         60 
MPNKRNVELL ATLKENLERA QGSFFLVNYQ GLPAKETHAL RQALKQNGAR LFVAKNTLIR 

        70         80         90        100        110        120 
LALKELGLPE LDGLQGPSAV VFYEDPVAAA KTLVQFAKSN PKGIPQVKSG LLQGQILTAK 

       130        140        150        160        170 
DVEALAELPT MDELRAELVG VLQAPMAELV GVLGGVAREL VGILEAYAEK KAA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS82119.1.
RefSeqYP_005746.1. NC_005835.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3D5BX-ray3.21J1-173[»]
3D5DX-ray3.21J1-173[»]
3MRZX-ray3.62I1-173[»]
3MS1X-ray3.62I1-173[»]
3PYOX-ray3.50I3-67[»]
3PYRX-ray3.50I3-67[»]
3PYTX-ray3.40I3-67[»]
3PYVX-ray3.40I3-67[»]
ProteinModelPortalQ72GS1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC1777.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS82119; AAS82119; TT_C1777.
GeneID2774754.
KEGGtth:TTC1777.
PATRIC23954023. VBITheThe54392_1777.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0244.
KOK02864.
OrthoDBEOG6DNTDR.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1815-MONOMER.

Family and domain databases

HAMAPMF_00362. Ribosomal_L10.
InterProIPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
[Graphical view]
PfamPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ72GS1.

Entry information

Entry nameRL10_THET2
AccessionPrimary (citable) accession number: Q72GS1
Entry history
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references