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Protein
Submitted name:

Heat resistant RNA dependent ATPase

Gene

TT_C1895

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei30AMP; via carbonyl oxygenCombined sources1
Binding sitei35AMPCombined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi56 – 59AMPCombined sources4

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HelicaseUniRule annotation, Hydrolase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Heat resistant RNA dependent ATPaseImported
Gene namesi
Ordered Locus Names:TT_C1895Imported
OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)Imported
Taxonomic identifieri262724 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000592 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC1895.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3EAQX-ray2.30A/B215-426[»]
3EARX-ray2.30A/B215-426[»]
3EASX-ray2.80A/B215-426[»]
3I31X-ray1.80A431-517[»]
3I32X-ray2.80A218-517[»]
3MWJX-ray1.40A/B8-214[»]
3MWKX-ray1.45A/B8-214[»]
3MWLX-ray1.60A/B8-214[»]
3NBFX-ray1.90A/B/C/D8-214[»]
3NEJX-ray2.57A/B8-214[»]
4I67X-ray2.33A431-517[»]
4I68X-ray1.63A431-517[»]
4I69X-ray1.79A/B/C431-517[»]
4KBFX-ray1.90A/B8-372[»]
4KBGX-ray2.54A/B8-372[»]
ProteinModelPortaliQ72GF3.
SMRiQ72GF3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ72GF3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 36Q_MOTIFInterPro annotationAdd BLAST29
Domaini39 – 210Helicase ATP-bindingInterPro annotationAdd BLAST172
Domaini235 – 380Helicase C-terminalInterPro annotationAdd BLAST146

Sequence similaritiesi

Belongs to the DEAD box helicase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C1J. Bacteria.
COG0513. LUCA.
KOiK05592.
OMAiLTGEEGW.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000629. RNA-helicase_DEAD-box_CS.
IPR014014. RNA_helicase_DEAD_Q_motif.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00039. DEAD_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q72GF3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGPERQSMEF KDFPLKPEIL EALHGRGLTT PTPIQAAALP LALEGKDLIG
60 70 80 90 100
QARTGTGKTL AFALPIAERL APSQERGRKP RALVLTPTRE LALQVASELT
110 120 130 140 150
AVAPHLKVVA VYGGTGYGKQ KEALLRGADA VVATPGRALD YLRQGVLDLS
160 170 180 190 200
RVEVAVLDEA DEMLSMGFEE EVEALLSATP PSRQTLLFSA TLPSWAKRLA
210 220 230 240 250
ERYMKNPVLI NVIKDEPVTY EEEAVPAPVR GRLEVLSDLL YVASPDRAMV
260 270 280 290 300
FTRTKAETEE IAQGLLRLGH PAQALHGDLS QGERERVLGA FRQGEVRVLV
310 320 330 340 350
ATDVAARGLD IPQVDLVVHY RLPDRAEAYQ HRSGRTGRAG RGGRVVLLYG
360 370 380 390 400
PRERRDVEAL ERAVGRRFKR VNPPTPEEVL EAKWRHLLAR LARVPEKDYR
410 420 430 440 450
LYQDFAGRLF AEGRVEVVAA LLALLLGGAP AERSLLTGEE GWRTYKATGP
460 470 480 490 500
RLSLPRLVAL LKGQGLEVGK VAEAEGGFYV DLRPEARPEV AGLRLEPARR
510
VEGLLEIPSR TRRPARA
Length:517
Mass (Da):56,738
Last modified:July 5, 2004 - v1
Checksum:i83B1412150CEF34A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS82237.1.

Genome annotation databases

EnsemblBacteriaiAAS82237; AAS82237; TT_C1895.
KEGGitth:TT_C1895.
PATRICi23954257. VBITheThe54392_1891.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017221 Genomic DNA. Translation: AAS82237.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3EAQX-ray2.30A/B215-426[»]
3EARX-ray2.30A/B215-426[»]
3EASX-ray2.80A/B215-426[»]
3I31X-ray1.80A431-517[»]
3I32X-ray2.80A218-517[»]
3MWJX-ray1.40A/B8-214[»]
3MWKX-ray1.45A/B8-214[»]
3MWLX-ray1.60A/B8-214[»]
3NBFX-ray1.90A/B/C/D8-214[»]
3NEJX-ray2.57A/B8-214[»]
4I67X-ray2.33A431-517[»]
4I68X-ray1.63A431-517[»]
4I69X-ray1.79A/B/C431-517[»]
4KBFX-ray1.90A/B8-372[»]
4KBGX-ray2.54A/B8-372[»]
ProteinModelPortaliQ72GF3.
SMRiQ72GF3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262724.TTC1895.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS82237; AAS82237; TT_C1895.
KEGGitth:TT_C1895.
PATRICi23954257. VBITheThe54392_1891.

Phylogenomic databases

eggNOGiENOG4105C1J. Bacteria.
COG0513. LUCA.
KOiK05592.
OMAiLTGEEGW.

Miscellaneous databases

EvolutionaryTraceiQ72GF3.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000629. RNA-helicase_DEAD-box_CS.
IPR014014. RNA_helicase_DEAD_Q_motif.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00039. DEAD_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ72GF3_THET2
AccessioniPrimary (citable) accession number: Q72GF3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 2, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.