Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q72G84 (RL28_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L28
Gene names
Name:rpmB
Ordered Locus Names:TT_C1964
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length98 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 989850S ribosomal protein L28 HAMAP-Rule MF_00373
PRO_1000121704

Secondary structure

....................... 98
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q72G84 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 0FD34D311DB6C379

FASTA9811,006
        10         20         30         40         50         60 
MSKVCEISGK RPIVANSIQR RGKAKREGGV GKKTTGISKR RQYPNLQKVR VRVAGQEITF 

        70         80         90 
RVAASHIPKV YELVERAKGL RLEGLSPKEI KKELLKLL 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS82306.1.
RefSeqYP_005933.1. NC_005835.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1VSAX-ray3.71V1-98[»]
1VSPX-ray3.83V1-98[»]
3D5BX-ray3.2111-98[»]
3D5DX-ray3.2111-98[»]
3F1FX-ray3.0011-98[»]
3F1HX-ray3.0011-98[»]
3MRZX-ray3.62X1-98[»]
3MS1X-ray3.62X1-98[»]
3PYOX-ray3.50X8-95[»]
3PYRX-ray3.50X8-95[»]
3PYTX-ray3.40X8-95[»]
3PYVX-ray3.40X8-95[»]
4KBUX-ray3.8613-95[»]
4KBWX-ray3.8613-95[»]
4KCZX-ray3.5013-95[»]
4KD2X-ray3.5013-95[»]
4KD9X-ray3.5013-95[»]
4KDBX-ray3.5013-95[»]
4KDHX-ray4.0013-95[»]
4KDKX-ray4.0013-95[»]
4KFIX-ray3.4018-95[»]
4KFLX-ray3.4018-95[»]
4L6JX-ray3.40X8-95[»]
4L6LX-ray3.40X8-95[»]
ProteinModelPortalQ72G84.
SMRQ72G84. Positions 8-95.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC1964.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS82306; AAS82306; TT_C1964.
GeneID2775268.
KEGGtth:TTC1964.
PATRIC23954397. VBITheThe54392_1958.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0227.
KOK02902.
OMAVANSHAH.
OrthoDBEOG6W727M.
ProtClustDBPRK00359.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-2008-MONOMER.

Family and domain databases

HAMAPMF_00373. Ribosomal_L28.
InterProIPR001383. Ribosomal_L28.
[Graphical view]
PfamPF00830. Ribosomal_L28. 1 hit.
[Graphical view]
TIGRFAMsTIGR00009. L28. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ72G84.

Entry information

Entry nameRL28_THET2
AccessionPrimary (citable) accession number: Q72G84
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references