Q72DN3 (Q72DN3_DESVH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lipoprotein, NLP/P60 family EMBL AAS95376.1

Gene names

Ordered Locus Names:

DVU_0896 EMBL AAS95376.1

Organism

Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) [Reference proteome] [HAMAP] EMBL AAS95376.1

Taxonomic identifier

882 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio › Desulfovibrio vulgaris

Protein attributes

Sequence length	464 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
PTM	Lipoprotein EMBL AAS95376.1
Technical term	3D-structure PDB 3M1U Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q72DN3 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: DEDEF04258F69B60	FASTA	464	50,304
	10 20 30 40 50 60 MKAANMRRLF VLSFRLLSCL LLAILLAACG ASRPATPPVT PPSREGHVAD LDRFPQDLRV 70 80 90 100 110 120 YAMKAGADRQ LLPFTEQAAQ DARWNRRFFA PWRMTRISVP VKDVAAPFGT DGRPRGYAEN 130 140 150 160 170 180 LLPWDVTRWG ALASGAALDL YPSQAWKGIV VSNSALREVP TLRPMFTAPT RAGQGYPFDM 190 200 210 220 230 240 FQRTAVWMGT PVFVGHATAD RAWLYVETAF AAGWMPAADV ARVDDAFMTR YESGSLAAIL 250 260 270 280 290 300 RDDTSLNGAD GTHLATAHIG TVLPLSGASQ VGRTVLVPVR APEGHAVVVP VLLTSGEAAQ 310 320 330 340 350 360 KPVPLTPGNM AELGNRMMGQ PYGWGGLYED RDCSSTLRDL FTPFGLWLPR NSASQAKAGR 370 380 390 400 410 420 YVDIAKLDAD DKEARIVAEG VPFMTLLWLR GHITLYLGLH EGQAAMFHNM WGIRTHRGGV 430 440 450 460 EGRYVLGRAV VTSTRPGLDV PGNDNADGLL GRMQGMSILP GGAQ

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough." Heidelberg J.F., Seshadri R., Haveman S.A., Hemme C.L., Paulsen I.T., Kolonay J.F., Eisen J.A., Ward N., Methe B., Brinkac L.M., Daugherty S.C., Deboy R.T., Dodson R.J., Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Fouts D. , Haft D.H., Selengut J., Peterson J.D., Davidsen T.M., Zafar N., Zhou L., Radune D., Dimitrov G., Hance M., Tran K., Khouri H., Gill J., Utterback T.R., Feldblyum T.V., Wall J.D., Voordouw G., Fraser C.M. Nat. Biotechnol. 22:554-559(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hildenborough / ATCC 29579 / NCIMB 8303.
[2]	"Crystal structure of a Putative gamma-D-glutamyl-L-diamino acid endopeptidase (DVU_0896) from DESULFOVIBRIO VULGARIS HILDENBOROUGH at 1.75 A resolution." Joint Center for Structural Genomics (JCSG) Submitted (MAR-2010) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.75 ANGSTROMS) OF 32-464.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE017285 Genomic DNA. Translation: AAS95376.1.

RefSeq

YP_010117.1. NC_002937.3.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3M1U	X-ray	1.75	A/B	32-464	[»]

ProteinModelPortal

Q72DN3.

ModBase

Search...

Protein-protein interaction databases

STRING

882.DVU0896.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

AAS95376; AAS95376; DVU_0896.

GeneID

2794114.

KEGG

dvu:DVU0896.

PATRIC

32061706. VBIDesVul119526_0840.

Phylogenomic databases

eggNOG

COG0791.

OMA

NRDCSAF.

ProtClustDB

CLSK704921.

Enzyme and pathway databases

BioCyc

DVUL882:GJIL-920-MONOMER.

Family and domain databases

Gene3D

3.90.1720.10. 1 hit.

InterPro

IPR000064. NLP_P60_dom.
IPR025606. NLPC/P60_N_dom.
IPR027017. P60_peptidase_YkfC.
IPR026864. SH3b2-type_SH3.
[Graphical view]

Pfam

PF12912. N_NLPC_P60. 1 hit.
PF00877. NLPC_P60. 1 hit.
PF12914. SH3_7. 1 hit.
[Graphical view]

PIRSF

PIRSF019015. P60_peptidase_YkfC. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q72DN3_DESVH

Accession

Primary (citable) accession number: Q72DN3

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	May 29, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)