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UniProtKB - Q72CN5 (SYR_DESVH)

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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

Complete GO annotation...

GO - Biological processi

Complete GO annotation...

Keywordsi

Molecular functionAminoacyl-tRNA synthetase, Ligase
Biological processProtein biosynthesis
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:DVU_1248
OrganismiDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
Taxonomic identifieri882 [NCBI]
Taxonomic lineageiBacteria › Proteobacteria › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio ›
Proteomesi
  • UP000002194 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002420161 – 551Arginine--tRNA ligaseAdd BLAST551

Proteomic databases

PaxDbiQ72CN5.

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi882.DVU1248.

Structurei

3D structure databases

ProteinModelPortaliQ72CN5.
SMRiQ72CN5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi125 – 135"HIGH" regionAdd BLAST11

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C75. Bacteria.
COG0018. LUCA.
KOiK01887.
OMAiNKPLHLG.
OrthoDBiPOG091H01RF.
PhylomeDBiQ72CN5.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth. 1 hit.
InterProiView protein in InterPro
IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_Ia_anticodon-bd.
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiView protein in Pfam
PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
PRINTSiPR01038. TRNASYNTHARG.
SMARTiView protein in SMART
SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiView protein in PROSITE
PS00178. AA_TRNA_LIGASE_I. 1 hit.

Sequencei

Sequence statusi: Complete.

Q72CN5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRAKKQLLAA LQDIVKDMGL AWPEKATIDT PKATGFGDLA ANIALVLAKQ 
        60         70         80         90        100
AGQNPRELAT RIADALRNRD ADITAIDIAG PGFLNVTYSQ DFWRETILRA 
       110        120        130        140        150
QEAGSAFGSS DTGAGRKVQV EYVSANPTGP LHIGHGRGAA VGDSLARIMR 
       160        170        180        190        200
FAGYDVSTEY YINDAGRQMR LLGLSVWVRA KELAGRPVTL PEDFYRGDYI 
       210        220        230        240        250
KDIARELMEK EPGLLDLDDA AGEDRCFAYA MSSILDGIKQ DLADFRVEHQ 
       260        270        280        290        300
VWFSERSLVE GGAVEKTFNR LKEAGLAFEQ DGALWFRTTD FGDDKDRVLR 
       310        320        330        340        350
KSDGTLTYFS SDIAYHDNKY DRGFDLVVDI WGADHHGYIP RMRAAVAALG 
       360        370        380        390        400
RKPEAFDVVL IQLVNLLRGG ELVAMSTRAG QFETLADVVK ETGADAARFM 
       410        420        430        440        450
FLSRKSDSPL DFDLELVKQR TMDNPVYYVQ YAHARVCSVL RKAAERGIEM 
       460        470        480        490        500
PAQLDGASLA PLSGDDEMEL LRLLDRFEET VAGAATALAP HHISHYLMEV 
       510        520        530        540        550
AGALHSYYAR QPILNATEQD VIVPRLALLR AVGCVLANGL SLLGVSAPES 

M
Length:551
Mass (Da):60,510
Last modified:July 5, 2004 - v1
Checksum:i1F2085596C6C67C5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017285 Genomic DNA. Translation: AAS95726.1.
RefSeqiWP_010938544.1. NC_002937.3.
YP_010467.1. NC_002937.3.

Genome annotation databases

EnsemblBacteriaiAAS95726; AAS95726; DVU_1248.
GeneIDi2795029.
KEGGidvu:DVU1248.
PATRICifig|882.5.peg.1167.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017285 Genomic DNA. Translation: AAS95726.1.
RefSeqiWP_010938544.1. NC_002937.3.
YP_010467.1. NC_002937.3.

3D structure databases

ProteinModelPortaliQ72CN5.
SMRiQ72CN5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi882.DVU1248.

Proteomic databases

PaxDbiQ72CN5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS95726; AAS95726; DVU_1248.
GeneIDi2795029.
KEGGidvu:DVU1248.
PATRICifig|882.5.peg.1167.

Phylogenomic databases

eggNOGiENOG4105C75. Bacteria.
COG0018. LUCA.
KOiK01887.
OMAiNKPLHLG.
OrthoDBiPOG091H01RF.
PhylomeDBiQ72CN5.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth. 1 hit.
InterProiView protein in InterPro
IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_Ia_anticodon-bd.
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiView protein in Pfam
PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
PRINTSiPR01038. TRNASYNTHARG.
SMARTiView protein in SMART
SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiView protein in PROSITE
PS00178. AA_TRNA_LIGASE_I. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiSYR_DESVH
AccessioniPrimary (citable) accession number: Q72CN5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2004
Last modified: June 7, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.