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Protein
Submitted name:

Methyl-accepting chemotaxis protein DcrH

Gene

dcrH

Organism
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi850Iron oxide (2Fe-O); via tele nitrogenCombined sources1
Metal bindingi886Iron oxide (2Fe-O); via tele nitrogenCombined sources1
Metal bindingi890Iron oxide (2Fe-O)Combined sources1
Metal bindingi905Iron oxide (2Fe-O); via tele nitrogenCombined sources1
Metal bindingi909Iron oxide (2Fe-O); via tele nitrogenCombined sources1
Metal bindingi945Iron oxide (2Fe-O); via tele nitrogenCombined sources1
Metal bindingi950Iron oxide (2Fe-O)Combined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

IronCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis protein DcrHImported
Gene namesi
Name:dcrHImported
Ordered Locus Names:DVU_3155Imported
OrganismiDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)Imported
Taxonomic identifieri882 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000002194 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei7 – 29HelicalSequence analysisAdd BLAST23
Transmembranei422 – 447HelicalSequence analysisAdd BLAST26

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ726F3.

Interactioni

Protein-protein interaction databases

STRINGi882.DVU3155.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3AGTX-ray1.40A/B828-963[»]
3AGUX-ray1.80A/B828-963[»]
3WAQX-ray1.80A828-963[»]
3WHNX-ray1.90A/B828-963[»]
ProteinModelPortaliQ726F3.
SMRiQ726F3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ726F3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini445 – 497HAMPInterPro annotationAdd BLAST53
Domaini544 – 780Methyl-accepting transducerInterPro annotationAdd BLAST237

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4108RKA. Bacteria.
COG0840. LUCA.
KOiK07216.
OMAiKWAILTE.
OrthoDBiPOG091H0QRR.
PhylomeDBiQ726F3.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
Gene3Di1.20.120.50. 1 hit.
InterProiIPR012312. Haemerythrin-like.
IPR016131. Haemerythrin_Fe_BS.
IPR012827. Haemerythrin_metal-bd.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47188. SSF47188. 1 hit.
TIGRFAMsiTIGR02481. hemeryth_dom. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS00550. HEMERYTHRINS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q726F3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLKRKLMVG FILALFVTCT LIAGVNWYFA HDGMNGIGDT AVEAMKDRAR
60 70 80 90 100
GQLESIRSAK ALHIEDLFQR IRNQTRTLAE SLTVREAATT LSAAYFTVQG
110 120 130 140 150
ETTGALDAKA LRGKLTEDYA GANYLANPTF ATHARTAKGY APRPAETYLP
160 170 180 190 200
KDANGIILQA MYVHPSGNPN PLGEKHRLDA NPLASTYNTL HRKYHPILRN
210 220 230 240 250
YLTTFGYYDI FIIDAASGVI VYTVFKEKDY ATSLLTGPYR DTGLGAVFRE
260 270 280 290 300
AVENGRKGRR DAVSISDFAP YEPSYNAPAA FIAAPVFDDR GTCQAVLAFQ
310 320 330 340 350
MPVDNIDRIM TSNGRWQEVG LGTTGETYLV GPDMHPRSKL RAASGASDEV
360 370 380 390 400
VVDSEAARKA LGGESGTATI RDYRGKNVLA AWQPLRLEGL HYGLIAEIDI
410 420 430 440 450
DEALLAASKI TAARQGAEAR TLWGTLLVLA LGTLLGSGIA IALVGALSRP
460 470 480 490 500
LQRLQVYAGD VAAGNLDARP EGQYPAELDA MRHSIESMVQ NLRMRIHEAD
510 520 530 540 550
AKGMEAADSA QAAQAALDKA RASETRIKGL MERMTGAAGK ARSVSEHVSR
560 570 580 590 600
SINDLTAQVH TITQGVETQR HRMDDTAQAM DTMRTMVSDV ADNARRAAEQ
610 620 630 640 650
ADLSRGHAQQ GASGVGEAVA SIGQVRERIE RLNTAMARLG EEADSIGKVM
660 670 680 690 700
SVISDIADQT NLLALNAAIE AARAGDAGRG FAVVADEVRK LAEKTMQATG
710 720 730 740 750
EVGSAVTRIQ THTRDNIAAV ETAMREATAS ADAATASGRV MDDIVSRVDE
760 770 780 790 800
TAGMVQSIAA ASDQQAAAAT MVGRNVEEVN AIAGDTAASM SHFAGTLEDI
810 820 830 840 850
FSQVQELFSM IEVISTGEEG VSVLADTGDA DVLVKWSEDL ANLPSIDTQH
860 870 880 890 900
KRLVDYINDL YRAARRRDMD KAREVFDALK NYAVEHFGYE ERLFADYAYP
910 920 930 940 950
EATRHKEIHR RFVETVLKWE KQLAAGDPEV VMTTLRGLVD WLVNHIMKED
960
KKYEAYLRER GVS
Length:963
Mass (Da):104,483
Last modified:July 5, 2004 - v1
Checksum:i06AF4DF66DAE491E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017285 Genomic DNA. Translation: AAS97625.1.
RefSeqiWP_010940413.1. NC_002937.3.
YP_012365.1. NC_002937.3.

Genome annotation databases

EnsemblBacteriaiAAS97625; AAS97625; DVU_3155.
GeneIDi2795860.
KEGGidvu:DVU3155.
PATRICi32065852. VBIDesVul119526_2860.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017285 Genomic DNA. Translation: AAS97625.1.
RefSeqiWP_010940413.1. NC_002937.3.
YP_012365.1. NC_002937.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3AGTX-ray1.40A/B828-963[»]
3AGUX-ray1.80A/B828-963[»]
3WAQX-ray1.80A828-963[»]
3WHNX-ray1.90A/B828-963[»]
ProteinModelPortaliQ726F3.
SMRiQ726F3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi882.DVU3155.

Proteomic databases

PaxDbiQ726F3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAS97625; AAS97625; DVU_3155.
GeneIDi2795860.
KEGGidvu:DVU3155.
PATRICi32065852. VBIDesVul119526_2860.

Phylogenomic databases

eggNOGiENOG4108RKA. Bacteria.
COG0840. LUCA.
KOiK07216.
OMAiKWAILTE.
OrthoDBiPOG091H0QRR.
PhylomeDBiQ726F3.

Miscellaneous databases

EvolutionaryTraceiQ726F3.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
Gene3Di1.20.120.50. 1 hit.
InterProiIPR012312. Haemerythrin-like.
IPR016131. Haemerythrin_Fe_BS.
IPR012827. Haemerythrin_metal-bd.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47188. SSF47188. 1 hit.
TIGRFAMsiTIGR02481. hemeryth_dom. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS00550. HEMERYTHRINS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ726F3_DESVH
AccessioniPrimary (citable) accession number: Q726F3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 2, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.