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Q726F3

- Q726F3_DESVH

UniProt

Q726F3 - Q726F3_DESVH

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Protein
Submitted name: Methyl-accepting chemotaxis protein DcrH
Gene
dcrH, DVU_3155
Organism
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi850 – 8501Iron oxide (2Fe-O); via tele nitrogenImported
Metal bindingi886 – 8861Iron oxide (2Fe-O); via tele nitrogenImported
Metal bindingi890 – 8901Iron oxide (2Fe-O)Imported
Metal bindingi905 – 9051Iron oxide (2Fe-O); via tele nitrogenImported
Metal bindingi909 – 9091Iron oxide (2Fe-O); via tele nitrogenImported
Metal bindingi945 – 9451Iron oxide (2Fe-O); via tele nitrogenImported
Metal bindingi950 – 9501Iron oxide (2Fe-O)Imported

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. signal transducer activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

IronImported, Metal-bindingImported

Enzyme and pathway databases

BioCyciDVUL882:GJIL-3238-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis protein DcrHImported
Gene namesi
Name:dcrHImported
Ordered Locus Names:DVU_3155Imported
OrganismiDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)Imported
Taxonomic identifieri882 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000002194: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi882.DVU3155.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3AGTX-ray1.40A/B828-963[»]
3AGUX-ray1.80A/B828-963[»]
3WAQX-ray1.80A828-963[»]
3WHNX-ray1.90A/B828-963[»]
ProteinModelPortaliQ726F3.
SMRiQ726F3. Positions 831-963.

Miscellaneous databases

EvolutionaryTraceiQ726F3.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
KOiK07216.
OMAiKWAILTE.
OrthoDBiEOG6PKF80.
PhylomeDBiQ726F3.

Family and domain databases

Gene3Di1.20.120.50. 1 hit.
InterProiIPR012827. Haemerythrin-like_metal-bd.
IPR012312. Haemerythrin/HHE_cat-bd_motif.
IPR016131. Haemerythrin_Fe_BS.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47188. SSF47188. 1 hit.
TIGRFAMsiTIGR02481. hemeryth_dom. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS00550. HEMERYTHRINS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q726F3-1 [UniParc]FASTAAdd to Basket

« Hide

MTLKRKLMVG FILALFVTCT LIAGVNWYFA HDGMNGIGDT AVEAMKDRAR    50
GQLESIRSAK ALHIEDLFQR IRNQTRTLAE SLTVREAATT LSAAYFTVQG 100
ETTGALDAKA LRGKLTEDYA GANYLANPTF ATHARTAKGY APRPAETYLP 150
KDANGIILQA MYVHPSGNPN PLGEKHRLDA NPLASTYNTL HRKYHPILRN 200
YLTTFGYYDI FIIDAASGVI VYTVFKEKDY ATSLLTGPYR DTGLGAVFRE 250
AVENGRKGRR DAVSISDFAP YEPSYNAPAA FIAAPVFDDR GTCQAVLAFQ 300
MPVDNIDRIM TSNGRWQEVG LGTTGETYLV GPDMHPRSKL RAASGASDEV 350
VVDSEAARKA LGGESGTATI RDYRGKNVLA AWQPLRLEGL HYGLIAEIDI 400
DEALLAASKI TAARQGAEAR TLWGTLLVLA LGTLLGSGIA IALVGALSRP 450
LQRLQVYAGD VAAGNLDARP EGQYPAELDA MRHSIESMVQ NLRMRIHEAD 500
AKGMEAADSA QAAQAALDKA RASETRIKGL MERMTGAAGK ARSVSEHVSR 550
SINDLTAQVH TITQGVETQR HRMDDTAQAM DTMRTMVSDV ADNARRAAEQ 600
ADLSRGHAQQ GASGVGEAVA SIGQVRERIE RLNTAMARLG EEADSIGKVM 650
SVISDIADQT NLLALNAAIE AARAGDAGRG FAVVADEVRK LAEKTMQATG 700
EVGSAVTRIQ THTRDNIAAV ETAMREATAS ADAATASGRV MDDIVSRVDE 750
TAGMVQSIAA ASDQQAAAAT MVGRNVEEVN AIAGDTAASM SHFAGTLEDI 800
FSQVQELFSM IEVISTGEEG VSVLADTGDA DVLVKWSEDL ANLPSIDTQH 850
KRLVDYINDL YRAARRRDMD KAREVFDALK NYAVEHFGYE ERLFADYAYP 900
EATRHKEIHR RFVETVLKWE KQLAAGDPEV VMTTLRGLVD WLVNHIMKED 950
KKYEAYLRER GVS 963
Length:963
Mass (Da):104,483
Last modified:July 5, 2004 - v1
Checksum:i06AF4DF66DAE491E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017285 Genomic DNA. Translation: AAS97625.1.
RefSeqiWP_010940413.1. NC_002937.3.
YP_012365.1. NC_002937.3.

Genome annotation databases

EnsemblBacteriaiAAS97625; AAS97625; DVU_3155.
GeneIDi2795860.
KEGGidvu:DVU3155.
PATRICi32065852. VBIDesVul119526_2860.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017285 Genomic DNA. Translation: AAS97625.1 .
RefSeqi WP_010940413.1. NC_002937.3.
YP_012365.1. NC_002937.3.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3AGT X-ray 1.40 A/B 828-963 [» ]
3AGU X-ray 1.80 A/B 828-963 [» ]
3WAQ X-ray 1.80 A 828-963 [» ]
3WHN X-ray 1.90 A/B 828-963 [» ]
ProteinModelPortali Q726F3.
SMRi Q726F3. Positions 831-963.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 882.DVU3155.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS97625 ; AAS97625 ; DVU_3155 .
GeneIDi 2795860.
KEGGi dvu:DVU3155.
PATRICi 32065852. VBIDesVul119526_2860.

Phylogenomic databases

eggNOGi COG0840.
KOi K07216.
OMAi KWAILTE.
OrthoDBi EOG6PKF80.
PhylomeDBi Q726F3.

Enzyme and pathway databases

BioCyci DVUL882:GJIL-3238-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q726F3.

Family and domain databases

Gene3Di 1.20.120.50. 1 hit.
InterProi IPR012827. Haemerythrin-like_metal-bd.
IPR012312. Haemerythrin/HHE_cat-bd_motif.
IPR016131. Haemerythrin_Fe_BS.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view ]
Pfami PF00672. HAMP. 1 hit.
PF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view ]
SMARTi SM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view ]
SUPFAMi SSF47188. SSF47188. 1 hit.
TIGRFAMsi TIGR02481. hemeryth_dom. 1 hit.
PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS00550. HEMERYTHRINS. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Hildenborough / ATCC 29579 / NCIMB 8303.
  2. "Characteristics of Diiron Site with Large Cavity in Hemerythrin-like Domain of DcrH."
    Onoda A., Okamoto Y., Sugimoto H., Mizohata E., Inoue T., Shiro Y., Hayashi T.
    Submitted (APR-2010) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) OF 828-963.
  3. "Crystal structure, exogenous ligand binding, and redox properties of an engineered diiron active site in a bacterial hemerythrin."
    Okamoto Y., Onoda A., Sugimoto H., Takano Y., Hirota S., Kurtz D.M., Shiro Y., Hayashi T.
    Inorg. Chem. 52:13014-13020(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 828-963 IN COMPLEX WITH IRON OXIDE (2FE-O).
  4. "H2O2-dependent substrate oxidation by an engineered diiron site in a bacterial hemerythrin."
    Okamoto Y., Onoda A., Sugimoto H., Takano Y., Hirota S., Kurtz D.M., Shiro Y., Hayashi T.
    Chem. Commun. (Camb.) 50:3421-3423(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 828-963.

Entry informationi

Entry nameiQ726F3_DESVH
AccessioniPrimary (citable) accession number: Q726F3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 3, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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