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Q726F3 (Q726F3_DESVH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:dcrH EMBL AAS97625.1
Ordered Locus Names:DVU_3155 EMBL AAS97625.1
OrganismDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) [Reference proteome] [HAMAP] EMBL AAS97625.1
Taxonomic identifier882 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

Protein attributes

Sequence length963 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
Q726F3 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 06AF4DF66DAE491E

FASTA963104,483
        10         20         30         40         50         60 
MTLKRKLMVG FILALFVTCT LIAGVNWYFA HDGMNGIGDT AVEAMKDRAR GQLESIRSAK 

        70         80         90        100        110        120 
ALHIEDLFQR IRNQTRTLAE SLTVREAATT LSAAYFTVQG ETTGALDAKA LRGKLTEDYA 

       130        140        150        160        170        180 
GANYLANPTF ATHARTAKGY APRPAETYLP KDANGIILQA MYVHPSGNPN PLGEKHRLDA 

       190        200        210        220        230        240 
NPLASTYNTL HRKYHPILRN YLTTFGYYDI FIIDAASGVI VYTVFKEKDY ATSLLTGPYR 

       250        260        270        280        290        300 
DTGLGAVFRE AVENGRKGRR DAVSISDFAP YEPSYNAPAA FIAAPVFDDR GTCQAVLAFQ 

       310        320        330        340        350        360 
MPVDNIDRIM TSNGRWQEVG LGTTGETYLV GPDMHPRSKL RAASGASDEV VVDSEAARKA 

       370        380        390        400        410        420 
LGGESGTATI RDYRGKNVLA AWQPLRLEGL HYGLIAEIDI DEALLAASKI TAARQGAEAR 

       430        440        450        460        470        480 
TLWGTLLVLA LGTLLGSGIA IALVGALSRP LQRLQVYAGD VAAGNLDARP EGQYPAELDA 

       490        500        510        520        530        540 
MRHSIESMVQ NLRMRIHEAD AKGMEAADSA QAAQAALDKA RASETRIKGL MERMTGAAGK 

       550        560        570        580        590        600 
ARSVSEHVSR SINDLTAQVH TITQGVETQR HRMDDTAQAM DTMRTMVSDV ADNARRAAEQ 

       610        620        630        640        650        660 
ADLSRGHAQQ GASGVGEAVA SIGQVRERIE RLNTAMARLG EEADSIGKVM SVISDIADQT 

       670        680        690        700        710        720 
NLLALNAAIE AARAGDAGRG FAVVADEVRK LAEKTMQATG EVGSAVTRIQ THTRDNIAAV 

       730        740        750        760        770        780 
ETAMREATAS ADAATASGRV MDDIVSRVDE TAGMVQSIAA ASDQQAAAAT MVGRNVEEVN 

       790        800        810        820        830        840 
AIAGDTAASM SHFAGTLEDI FSQVQELFSM IEVISTGEEG VSVLADTGDA DVLVKWSEDL 

       850        860        870        880        890        900 
ANLPSIDTQH KRLVDYINDL YRAARRRDMD KAREVFDALK NYAVEHFGYE ERLFADYAYP 

       910        920        930        940        950        960 
EATRHKEIHR RFVETVLKWE KQLAAGDPEV VMTTLRGLVD WLVNHIMKED KKYEAYLRER 


GVS 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough."
Heidelberg J.F., Seshadri R., Haveman S.A., Hemme C.L., Paulsen I.T., Kolonay J.F., Eisen J.A., Ward N.L., Methe B.A., Brinkac L.M., Daugherty S.C., DeBoy R.T., Dodson R.J., Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Fouts D.E. expand/collapse author list , Haft D.H., Selengut J., Peterson J.D., Davidsen T.M., Zafar N., Zhou L., Radune D., Dimitrov G., Hance M., Tran K., Khouri H.M., Gill J., Utterback T.R., Feldblyum T.V., Wall J.D., Voordouw G., Fraser C.M.
Nat. Biotechnol. 22:554-559(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hildenborough / ATCC 29579 / NCIMB 8303.
[2]"Characteristics of Diiron Site with Large Cavity in Hemerythrin-like Domain of DcrH."
Onoda A., Okamoto Y., Sugimoto H., Mizohata E., Inoue T., Shiro Y., Hayashi T.
Submitted (APR-2010) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) OF 828-963.
[3]"H2O2-dependent substrate oxidation by an engineered diiron site in a bacterial hemerythrin."
Okamoto Y., Onoda A., Sugimoto H., Takano Y., Hirota S., Kurtz D.M., Shiro Y., Hayashi T.
Chem. Commun. (Camb.) 50:3421-3423(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 828-963.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017285 Genomic DNA. Translation: AAS97625.1.
RefSeqYP_012365.1. NC_002937.3.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3AGTX-ray1.40A/B828-963[»]
3AGUX-ray1.80A/B828-963[»]
3WHNX-ray1.90A/B828-963[»]
ProteinModelPortalQ726F3.
SMRQ726F3. Positions 831-963.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING882.DVU3155.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS97625; AAS97625; DVU_3155.
GeneID2795860.
KEGGdvu:DVU3155.
PATRIC32065852. VBIDesVul119526_2860.

Phylogenomic databases

eggNOGCOG0840.
KOK07216.
OMAATPFTFI.
OrthoDBEOG6PKF80.
ProtClustDBCLSK706205.

Enzyme and pathway databases

BioCycDVUL882:GJIL-3238-MONOMER.

Family and domain databases

Gene3D1.20.120.50. 1 hit.
InterProIPR012827. Haemerythrin-like_metal-bd.
IPR012312. Haemerythrin/HHE_cat-bd_motif.
IPR016131. Haemerythrin_Fe_BS.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF47188. SSF47188. 1 hit.
TIGRFAMsTIGR02481. hemeryth_dom. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS00550. HEMERYTHRINS. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ726F3.

Entry information

Entry nameQ726F3_DESVH
AccessionPrimary (citable) accession number: Q726F3
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)