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Q726F3

- Q726F3_DESVH

UniProt

Q726F3 - Q726F3_DESVH

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Protein
Submitted name:

Methyl-accepting chemotaxis protein DcrH

Gene

dcrH

Organism
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi850 – 8501Ironoxide (2Fe-O); via tele nitrogenImported
Metal bindingi886 – 8861Ironoxide (2Fe-O); via tele nitrogenImported
Metal bindingi890 – 8901Ironoxide (2Fe-O)Imported
Metal bindingi905 – 9051Ironoxide (2Fe-O); via tele nitrogenImported
Metal bindingi909 – 9091Ironoxide (2Fe-O); via tele nitrogenImported
Metal bindingi945 – 9451Ironoxide (2Fe-O); via tele nitrogenImported
Metal bindingi950 – 9501Ironoxide (2Fe-O)Imported

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. signal transducer activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-bindingImported

Enzyme and pathway databases

BioCyciDVUL882:GJIL-3238-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis protein DcrHImported
Gene namesi
Name:dcrHImported
Ordered Locus Names:DVU_3155Imported
OrganismiDesulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)Imported
Taxonomic identifieri882 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000002194: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi882.DVU3155.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3AGTX-ray1.40A/B828-963[»]
3AGUX-ray1.80A/B828-963[»]
3WAQX-ray1.80A828-963[»]
3WHNX-ray1.90A/B828-963[»]
ProteinModelPortaliQ726F3.
SMRiQ726F3. Positions 831-963.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ726F3.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
KOiK07216.
OMAiKWAILTE.
OrthoDBiEOG6PKF80.
PhylomeDBiQ726F3.

Family and domain databases

Gene3Di1.20.120.50. 1 hit.
InterProiIPR012827. Haemerythrin-like_metal-bd.
IPR012312. Haemerythrin/HHE_cat-bd_motif.
IPR016131. Haemerythrin_Fe_BS.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47188. SSF47188. 1 hit.
TIGRFAMsiTIGR02481. hemeryth_dom. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS00550. HEMERYTHRINS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q726F3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTLKRKLMVG FILALFVTCT LIAGVNWYFA HDGMNGIGDT AVEAMKDRAR
60 70 80 90 100
GQLESIRSAK ALHIEDLFQR IRNQTRTLAE SLTVREAATT LSAAYFTVQG
110 120 130 140 150
ETTGALDAKA LRGKLTEDYA GANYLANPTF ATHARTAKGY APRPAETYLP
160 170 180 190 200
KDANGIILQA MYVHPSGNPN PLGEKHRLDA NPLASTYNTL HRKYHPILRN
210 220 230 240 250
YLTTFGYYDI FIIDAASGVI VYTVFKEKDY ATSLLTGPYR DTGLGAVFRE
260 270 280 290 300
AVENGRKGRR DAVSISDFAP YEPSYNAPAA FIAAPVFDDR GTCQAVLAFQ
310 320 330 340 350
MPVDNIDRIM TSNGRWQEVG LGTTGETYLV GPDMHPRSKL RAASGASDEV
360 370 380 390 400
VVDSEAARKA LGGESGTATI RDYRGKNVLA AWQPLRLEGL HYGLIAEIDI
410 420 430 440 450
DEALLAASKI TAARQGAEAR TLWGTLLVLA LGTLLGSGIA IALVGALSRP
460 470 480 490 500
LQRLQVYAGD VAAGNLDARP EGQYPAELDA MRHSIESMVQ NLRMRIHEAD
510 520 530 540 550
AKGMEAADSA QAAQAALDKA RASETRIKGL MERMTGAAGK ARSVSEHVSR
560 570 580 590 600
SINDLTAQVH TITQGVETQR HRMDDTAQAM DTMRTMVSDV ADNARRAAEQ
610 620 630 640 650
ADLSRGHAQQ GASGVGEAVA SIGQVRERIE RLNTAMARLG EEADSIGKVM
660 670 680 690 700
SVISDIADQT NLLALNAAIE AARAGDAGRG FAVVADEVRK LAEKTMQATG
710 720 730 740 750
EVGSAVTRIQ THTRDNIAAV ETAMREATAS ADAATASGRV MDDIVSRVDE
760 770 780 790 800
TAGMVQSIAA ASDQQAAAAT MVGRNVEEVN AIAGDTAASM SHFAGTLEDI
810 820 830 840 850
FSQVQELFSM IEVISTGEEG VSVLADTGDA DVLVKWSEDL ANLPSIDTQH
860 870 880 890 900
KRLVDYINDL YRAARRRDMD KAREVFDALK NYAVEHFGYE ERLFADYAYP
910 920 930 940 950
EATRHKEIHR RFVETVLKWE KQLAAGDPEV VMTTLRGLVD WLVNHIMKED
960
KKYEAYLRER GVS
Length:963
Mass (Da):104,483
Last modified:July 5, 2004 - v1
Checksum:i06AF4DF66DAE491E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017285 Genomic DNA. Translation: AAS97625.1.
RefSeqiYP_012365.1. NC_002937.3.

Genome annotation databases

EnsemblBacteriaiAAS97625; AAS97625; DVU_3155.
GeneIDi2795860.
KEGGidvu:DVU3155.
PATRICi32065852. VBIDesVul119526_2860.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017285 Genomic DNA. Translation: AAS97625.1 .
RefSeqi YP_012365.1. NC_002937.3.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3AGT X-ray 1.40 A/B 828-963 [» ]
3AGU X-ray 1.80 A/B 828-963 [» ]
3WAQ X-ray 1.80 A 828-963 [» ]
3WHN X-ray 1.90 A/B 828-963 [» ]
ProteinModelPortali Q726F3.
SMRi Q726F3. Positions 831-963.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 882.DVU3155.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAS97625 ; AAS97625 ; DVU_3155 .
GeneIDi 2795860.
KEGGi dvu:DVU3155.
PATRICi 32065852. VBIDesVul119526_2860.

Phylogenomic databases

eggNOGi COG0840.
KOi K07216.
OMAi KWAILTE.
OrthoDBi EOG6PKF80.
PhylomeDBi Q726F3.

Enzyme and pathway databases

BioCyci DVUL882:GJIL-3238-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q726F3.

Family and domain databases

Gene3Di 1.20.120.50. 1 hit.
InterProi IPR012827. Haemerythrin-like_metal-bd.
IPR012312. Haemerythrin/HHE_cat-bd_motif.
IPR016131. Haemerythrin_Fe_BS.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view ]
Pfami PF00672. HAMP. 1 hit.
PF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view ]
SMARTi SM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view ]
SUPFAMi SSF47188. SSF47188. 1 hit.
TIGRFAMsi TIGR02481. hemeryth_dom. 1 hit.
PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS00550. HEMERYTHRINS. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Hildenborough / ATCC 29579 / NCIMB 8303Imported.
  2. "Characteristics of Diiron Site with Large Cavity in Hemerythrin-like Domain of DcrH."
    Onoda A., Okamoto Y., Sugimoto H., Mizohata E., Inoue T., Shiro Y., Hayashi T.
    Submitted (APR-2010) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) OF 828-963.
  3. "Crystal structure, exogenous ligand binding, and redox properties of an engineered diiron active site in a bacterial hemerythrin."
    Okamoto Y., Onoda A., Sugimoto H., Takano Y., Hirota S., Kurtz D.M., Shiro Y., Hayashi T.
    Inorg. Chem. 52:13014-13020(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 828-963 IN COMPLEX WITH IRONOXIDE (2FE-O).
  4. "H2O2-dependent substrate oxidation by an engineered diiron site in a bacterial hemerythrin."
    Okamoto Y., Onoda A., Sugimoto H., Takano Y., Hirota S., Kurtz D.M., Shiro Y., Hayashi T.
    Chem. Commun. (Camb.) 50:3421-3423(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 828-963.

Entry informationi

Entry nameiQ726F3_DESVH
AccessioniPrimary (citable) accession number: Q726F3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3