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Protein
Submitted name:

Gag polyprotein

Gene

gag

Organism
Human immunodeficiency virus 1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Host-virus interaction, Viral budding, Viral budding via the host ESCRT complexesSAAS annotation, Virus exit from host cell

Names & Taxonomyi

Protein namesi
Submitted name:
Gag polyproteinImported
Gene namesi
Name:gagImported
OrganismiHuman immunodeficiency virus 1Imported
Taxonomic identifieri11676 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus group
Virus hostiHomo sapiens (Human) [TaxID: 9606]

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ72616.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 126125Gag_p17InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili87 – 11428Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.10.150.90. 1 hit.
InterProiIPR000071. Lentvrl_matrix_N.
IPR012344. Matrix_HIV/RSV.
IPR010999. Retrovr_matrix.
[Graphical view]
PfamiPF00540. Gag_p17. 1 hit.
[Graphical view]
PRINTSiPR00234. HIV1MATRIX.
SUPFAMiSSF47836. SSF47836. 1 hit.

Sequencei

Sequence statusi: Complete.

Q72616-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGARASVLSG GELDRWEKIR LRPGGKKKYQ LKHIVLASRE LERFAVNPGL
60 70 80 90 100
LETSDGCRQI LGQLQPALQT GSEELKSLYN TVATLYCVHQ KIDVKDTKEA
110 120 130
LEKIEEEQNK SKKKHSKQQL TQETAARSAK ITL
Length:133
Mass (Da):14,958
Last modified:November 1, 1996 - v1
Checksum:iC692C843BA1EDF4D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29403 Genomic RNA. Translation: AAB38024.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29403 Genomic RNA. Translation: AAB38024.1.

3D structure databases

ProteinModelPortaliQ72616.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.150.90. 1 hit.
InterProiIPR000071. Lentvrl_matrix_N.
IPR012344. Matrix_HIV/RSV.
IPR010999. Retrovr_matrix.
[Graphical view]
PfamiPF00540. Gag_p17. 1 hit.
[Graphical view]
PRINTSiPR00234. HIV1MATRIX.
SUPFAMiSSF47836. SSF47836. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ72616_9HIV1
AccessioniPrimary (citable) accession number: Q72616
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 17, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.