Q724V0 (Q724V0_LISMF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitinase B EMBL AAT02911.1
EC=3.2.1.14 EMBL AAT02911.1

Gene names

Name:	chiB EMBL AAT02911.1
Ordered Locus Names:	LMOf2365_0123

Organism

Listeria monocytogenes serotype 4b (strain F2365) [Complete proteome] [HAMAP]

Taxonomic identifier

265669 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length	760 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453 Contains 1 fibronectin type-III domain. RuleBase RU000718

Ontologies

Keywords
Molecular function	Glycosidase EMBL AAT02911.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	chitin catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q724V0 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 80AC71F9DEDB09AA	FASTA	760	82,057
	10 20 30 40 50 60 MNKKMKKLFS ITSVVLLVLS LVVVSIGAEP KRAKAAENVP QYRNVMYYGD WSIWGGEGNF 70 80 90 100 110 120 YPKDIPADQL THLNFAFLDF NSNGDLVFTD KDAAVGAPVG QEGVQWGGAN AGVLNAIQDL 130 140 150 160 170 180 RAQNPNLKIG VSVGGWSKSG DFSTVAADPT KRANFVKNVM KFVKYTNMDF VDLDWEYPAS 190 200 210 220 230 240 VRDADLVDNK NDEGTPNAKP ADKQNFITLL QDLRTALDKQ GVDINKKYEL SVALPAAKST 250 260 270 280 290 300 LENGIDVANL FKVVDFANVM TYDLNGAWTP NSAHHTALYG NPKDPNYDSG FSVDQTVKYL 310 320 330 340 350 360 KEKGAVSNKI VVGAAFYTRG WNKVAAGTDT ALPGLFQAAE KTNKDADGSL TYGANNENPI 370 380 390 400 410 420 KTGDGGRAGG VWAYRSIDAL KAKTPTLKEY WDDTAKAPYL YSKETGEFYT YDNTRSIGYK 430 440 450 460 470 480 AQYVKDNNLG GMISWMQSQD KTTTSTKRDE LTKAIKSGLF GTNAIPQNAI TYANLNVVAT 490 500 510 520 530 540 VKPYSENGVG YEITITNNEK ADETNEVLKS TELSFETVKL PKFYIPVKAG ETLTAGDYKA 550 560 570 580 590 600 GTVTTSGGNT VVDLASVYDA QQIPQGASYT FRLKSSASSV DVANISKIDL TQRMVKSSVE 610 620 630 640 650 660 FGKQTIFGGG TVVPDPSDTE APTVPKALTS SNVTDKSATL TWTASTDNKA VAGYKVYRNG 670 680 690 700 710 720 TEVGSVSGTT FTDSGLTAKT AYSYTVKAYD AAGNFSAASS ALTVTTLDAA TPPATPAWDA 730 740 750 760 AKTYNKGDRV SYKGKTYEAQ WWTQGNEPGA EQWGPWLLIN

References

[1]

"Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species." Nelson K.E., Fouts D.E., Mongodin E.F., Ravel J., DeBoy R.T., Kolonay J.F., Rasko D.A., Angiuoli S.V., Gill S.R., Paulsen I.T., Peterson J.D., White O., Nelson W.C., Nierman W.C., Beanan M.J., Brinkac L.M., Daugherty S.C., Dodson R.J. , Durkin A.S., Madupu R., Haft D.H., Selengut J., Van Aken S.E., Khouri H.M., Fedorova N., Forberger H.A., Tran B., Kathariou S., Wonderling L.D., Uhlich G.A., Bayles D.O., Luchansky J.B., Fraser C.M. Nucleic Acids Res. 32:2386-2395(2004) [PubMed: 15115801] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017262 Genomic DNA. Translation: AAT02911.1.
RefSeq	YP_012734.1. NC_002973.6.
3D structure databases
HSSP	HSSP built from PDB template 1K85 based on UniProtKB P20533.
ProteinModelPortal	Q724V0.
SMR	Q724V0. Positions 621-706.
ModBase	Search...
Protein-protein interaction databases
STRING	Q724V0.
Protein family/group databases
CAZy	CBM5. Carbohydrate-Binding Module Family 5. GH18. Glycoside Hydrolase Family 18.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2797877.
GenomeReviews	Gene locus LMOf2365_0123 in contig AE017262_GR.
KEGG	lmf:LMOf2365_0123.
PATRIC	20321423. VBILisMon105049_0125.
TIGR	LMOf2365_0123.
Phylogenomic databases
eggNOG	COG3325.
HOGENOM	HBG422984.
OMA	YGANNEN.
PhylomeDB	Q724V0.
ProtClustDB	CLSK563779.
Family and domain databases
InterPro	IPR003610. CBM_fam5/12. IPR011583. Chitinase_II. IPR003961. Fibronectin_type3. IPR001223. Glyco_hydro18cat. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:2.10.10.20. G3DSA:2.10.10.20. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K01183.
Pfam	PF02839. CBM_5_12. 1 hit. PF00041. fn3. 1 hit. PF00704. Glyco_hydro_18. 1 hit. [Graphical view]
SMART	SM00495. ChtBD3. 1 hit. SM00060. FN3. 1 hit. SM00636. Glyco_18. 1 hit. [Graphical view]
SUPFAM	SSF51055. CBM_5_12. 1 hit. SSF49265. FN_III-like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS50853. FN3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q724V0_LISMF

Accession

Primary (citable) accession number: Q724V0

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 14, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)