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Q71WY2 (Q71WY2_LISMF) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:LMOf2365_2417
OrganismListeria monocytogenes serotype 4b (strain F2365) [Complete proteome] [HAMAP]
Taxonomic identifier265669 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesListeriaceaeListeria

Protein attributes

Sequence length1310 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q71WY2 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 5C1344F12EB27B7D

FASTA1,310143,966
        10         20         30         40         50         60 
MKKGMKQVCV SMAVVPLVWL NLGITQPLQV EVKAEETKEK EVKKEANTGA AKQLSKEEYA 

        70         80         90        100        110        120 
KLSAEEGLGN VLEATVTDNV ITLKIDNGDE AEDDYLEISP LANNLLKVNL RPRNIENSPS 

       130        140        150        160        170        180 
TPMIDPNATF TAIGATIDLE SDPMIISTDE CTLEIAKEPA RMTFKDKNGK TLLSESADGG 

       190        200        210        220        230        240 
IFDGGVRFKR GASDHVYGAY GISFSDGDLG MERDNTAADS NKTAQAGQQG NAGGPFMWST 

       250        260        270        280        290        300 
AGYGLLVDSD GGYPYSVSDE EKLEFYYGDT VVEGRRYVKE NVEMYLMSGE PEEIMSSYAD 

       310        320        330        340        350        360 
VTGHTPMMPK WSLGFSNFEW GTNETEFREN INTYRAKGIP IDSFAFDYDW KFYGDPTYGG 

       370        380        390        400        410        420 
DYGEFAWNTE NFPSAKDTTL KSDMDALGVK MIGITKPRVV TNLEDGTATQ QGKDAEANGY 

       430        440        450        460        470        480 
WYPGQSAYED YAFPVTVRSI DPYNEDERNW WWSHSEDALD KGIVGWWNDE TDKVSSNGAD 

       490        500        510        520        530        540 
YWFGNFTTGF TSEAMYEGQR DYTNERVWQT GRTFYPGAQR YSTSTWSGDI GVQWKKGEVI 

       550        560        570        580        590        600 
DWANGMQEQP STMLSTINLG QTKWGMDTGG FNANSGQVLN PDPELYSRWM EFSSLVPVFR 

       610        620        630        640        650        660 
THGNQNQQRQ PWFYGGTAEE VAKSSMTWRY SMIPYMYAYE RQAYDSGVGL VQPLTFDNPT 

       670        680        690        700        710        720 
DENVVNLTDE WMFGDGLLAA PVLEEGAGSR DIYLPAGTWI DYNRGDVYEG NQTISYEVND 

       730        740        750        760        770        780 
DDWTDVPMFV KQGAIMPMQQ PQNYVGESAV KTIYLDTFAS DKETSFTHYD DDGKSFDYEK 

       790        800        810        820        830        840 
DTYLKQKMTT SKTADTSTFT IGAKEGSYKA DTENYIVKLH GNAAESVQVN GADSKVYDDL 

       850        860        870        880        890        900 
SALENADGSG YAVGSDVYGA VTYVKVPAQA DADTVITTSG SASVVQTGTY EMETGSNFAD 

       910        920        930        940        950        960 
TVADKPVAEK TYVDGYDKDG AGTTIYANVK DSGDYNVDLT YKNASADNQS LSIFVNGDYV 

       970        980        990       1000       1010       1020 
KQTTLKPNTD WSVQSEALPL SAGKNSISYK VVTDTGDKAD QVSLDKVNIG FTPTVAKVEA 

      1030       1040       1050       1060       1070       1080 
EEADLAGTLK VANDHWFYSG EGFVGGFGAA GDEIKFEVDV PADGEYVLNT RTANGTGMPQ 

      1090       1100       1110       1120       1130       1140 
TLDLYTNGDY NSRVTFPSEG ENWNIWSDTE KAVNLKAGTN KITFLRDGET TGNVNIDRIL 

      1150       1160       1170       1180       1190       1200 
VSAEPINSPV QSEVNLLDNG GFERDAAATT NWVESHPDGQ DKAYGVDSGS GVNPPESPAF 

      1210       1220       1230       1240       1250       1260 
GKQSAYFYLP GAYKQTLAQQ IAVPVNNANY DVEAWVKVSN DDAAKAQMTV NNYDSSDGKT 

      1270       1280       1290       1300       1310 
IDLVADDVWH YVTMKDVKVT TGNINTSFQM DSPGGTSIHI DNVRVMPSAE 

« Hide

References

[1]"Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species."
Nelson K.E., Fouts D.E., Mongodin E.F., Ravel J., DeBoy R.T., Kolonay J.F., Rasko D.A., Angiuoli S.V., Gill S.R., Paulsen I.T., Peterson J.D., White O., Nelson W.C., Nierman W.C., Beanan M.J., Brinkac L.M., Daugherty S.C., Dodson R.J. expand/collapse author list , Durkin A.S., Madupu R., Haft D.H., Selengut J., Van Aken S.E., Khouri H.M., Fedorova N., Forberger H.A., Tran B., Kathariou S., Wonderling L.D., Uhlich G.A., Bayles D.O., Luchansky J.B., Fraser C.M.
Nucleic Acids Res. 32:2386-2395(2004) [PubMed: 15115801] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017262 Genomic DNA. Translation: AAT05183.1.
RefSeqYP_015006.1. NC_002973.6.

3D structure databases

ProteinModelPortalQ71WY2.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ71WY2.

Protein family/group databases

CAZyCBM35. Carbohydrate-Binding Module Family 35.
GH31. Glycoside Hydrolase Family 31.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2798179.
GenomeReviewsGene locus LMOf2365_2417 in contig AE017262_GR.
KEGGlmf:LMOf2365_2417.
PATRIC20326201. VBILisMon105049_2434.
TIGRLMOf2365_2417.

Phylogenomic databases

eggNOGCOG1501.
HOGENOMHBG532937.
OMAEVIDWAN.
ProtClustDBCLSK226612.

Family and domain databases

InterProIPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR011013. Glyco_hydro-type_carb-bd.
IPR000322. Glyco_hydro_31.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR22762. Glyco_hydro_31. 1 hit.
PfamPF03422. CBM_6. 1 hit.
PF01055. Glyco_hydro_31. 1 hit.
[Graphical view]
SUPFAMSSF49785. Gal_bind_like. 2 hits.
SSF74650. Gal_mut_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS51175. CBM6. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ71WY2_LISMF
AccessionPrimary (citable) accession number: Q71WY2
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)