Q71WW0 (Q71WW0_LISMF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitin-binding protein/carbohydrate-binding protein EMBL AAT05205.1

Gene names

Ordered Locus Names:

LMOf2365_2440

Organism

Listeria monocytogenes serotype 4b (strain F2365) [Complete proteome] [HAMAP]

Taxonomic identifier

265669 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length	478 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 2 fibronectin type-III domains. RuleBase RU000718

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro viral capsid Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q71WW0 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: A6DB5D15837150E5	FASTA	478	52,299
	10 20 30 40 50 60 MKKMTKIGMF FAVFTLAVVL FQTTASAHGY ISKPASRVYL ANKGINVGVG SAQYEPQSVE 70 80 90 100 110 120 APKGFPASGP ADGSIAGGGK YSLLDAQTAN RWAKVDIQSG PLTVEWTLTA PHRTSSWQYF 130 140 150 160 170 180 ITKKGWDPNK PLTRASLEPL TTIEADGSVP NALTKQEINI PDDRSGYYVI LGVWNIADTG 190 200 210 220 230 240 NAFYQVIDAN IINSSVTPAV DNEAPTEPTN LAATTTAKNV SLTWTVSTDN VGIKGYEILR 250 260 270 280 290 300 DGVVLGESQT ASYEDTAVES NTAYTYTVRA KDFAGNKSTL SDSIDVTTKE APAVDNEAPT 310 320 330 340 350 360 APKSLMSHGQ TETTIALCWQ ASTDNVEVKN YEIYRNNTKI ATSTKNMFED TKLASNTSYN 370 380 390 400 410 420 YKVYAVDTSG NRSLVSNEIT IKTKPLDPLN TWKSDQIYHA GDQVYYNGVA YTAKWWTKGN 430 440 450 460 470 TPDTSDVWQT ASRDIQIWNA QKAYNGGDKV TYNGKTYQAK WWVRGEKPDS SSIWTLLN

References

[1]

"Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species." Nelson K.E., Fouts D.E., Mongodin E.F., Ravel J., DeBoy R.T., Kolonay J.F., Rasko D.A., Angiuoli S.V., Gill S.R., Paulsen I.T., Peterson J.D., White O., Nelson W.C., Nierman W.C., Beanan M.J., Brinkac L.M., Daugherty S.C., Dodson R.J. , Durkin A.S., Madupu R., Haft D.H., Selengut J., Van Aken S.E., Khouri H.M., Fedorova N., Forberger H.A., Tran B., Kathariou S., Wonderling L.D., Uhlich G.A., Bayles D.O., Luchansky J.B., Fraser C.M. Nucleic Acids Res. 32:2386-2395(2004) [PubMed: 15115801] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017262 Genomic DNA. Translation: AAT05205.1.
RefSeq	YP_015028.1. NC_002973.6.
3D structure databases
HSSP	HSSP built from PDB template 1K85 based on UniProtKB P20533.
ProteinModelPortal	Q71WW0.
SMR	Q71WW0. Positions 28-191.
ModBase	Search...
Protein-protein interaction databases
STRING	Q71WW0.
Protein family/group databases
CAZy	CBM33. Carbohydrate-Binding Module Family 33. CBM5. Carbohydrate-Binding Module Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2799900.
GenomeReviews	Gene locus LMOf2365_2440 in contig AE017262_GR.
KEGG	lmf:LMOf2365_2440.
PATRIC	20326249. VBILisMon105049_2457.
TIGR	LMOf2365_2440.
Phylogenomic databases
eggNOG	COG3397.
HOGENOM	HBG757921.
OMA	AVDNEAP.
PhylomeDB	Q71WW0.
ProtClustDB	CLSK2484877.
Family and domain databases
InterPro	IPR003610. CBM_fam5/12. IPR004302. Chitin-bd_3. IPR003961. Fibronectin_type3. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.10.10.20. G3DSA:2.10.10.20. 2 hits. G3DSA:2.60.40.10. Ig-like_fold. 2 hits.
KO	K03933.
Pfam	PF02839. CBM_5_12. 2 hits. PF03067. Chitin_bind_3. 1 hit. PF00041. fn3. 1 hit. [Graphical view]
SMART	SM00495. ChtBD3. 2 hits. SM00060. FN3. 2 hits. [Graphical view]
SUPFAM	SSF51055. CBM_5_12. 2 hits. SSF49265. FN_III-like. 2 hits. SSF81296. Ig_E-set. 1 hit.
PROSITE	PS50853. FN3. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q71WW0_LISMF

Accession

Primary (citable) accession number: Q71WW0

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 14, 2011
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)