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Protein
Submitted name:

Antimicrobial protein

Gene

AMP

Organism
Amaranthus hypochondriacus (Prince-of-Wales feather) (Amaranthus hybridus var. hypochondriacus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandChitin-bindingSAAS annotation

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.

Names & Taxonomyi

Protein namesi
Submitted name:
Antimicrobial proteinImported
Gene namesi
Name:AMPImported
OrganismiAmaranthus hypochondriacus (Prince-of-Wales feather) (Amaranthus hybridus var. hypochondriacus)Imported
Taxonomic identifieri28502 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeCaryophyllalesAmaranthaceaeAmaranthus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_500428375926 – 86Sequence analysisAdd BLAST61

Keywords - PTMi

Disulfide bondSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ71U16.
SMRiQ71U16.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 62Chitin-binding type-1InterPro annotationAdd BLAST35

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di3.30.60.10. 1 hit.
InterProiView protein in InterPro
IPR013006. Antimicrobial_C6_CS.
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR036861. Endochitinase-like_sf.
PfamiView protein in Pfam
PF00187. Chitin_bind_1. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609. Chitin_bd_1. 1 hit.
SMARTiView protein in SMART
SM00270. ChtBD1. 1 hit.
SUPFAMiSSF57016. SSF57016. 1 hit.
PROSITEiView protein in PROSITE
PS00026. CHIT_BIND_I_1. 1 hit.
PS60011. PLANT_C6_AMP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q71U16-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVNMKCVALI VIVMMAFMMV DPSMGVGECV RGRCPSGMCC SQFGYCGKGP
60 70 80
KYCGRASTTV DHQADVAATK TAKNPTDAKL AGAGSP
Length:86
Mass (Da):8,912
Last modified:July 5, 2004 - v1
Checksum:iC2C220E7DF373CB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF153915 Genomic DNA. Translation: AAD34639.1.

Similar proteinsi

Entry informationi

Entry nameiQ71U16_AMAHP
AccessioniPrimary (citable) accession number: Q71U16
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 28, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)