Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein BHLHb9

Gene

Bhlhb9

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

May play a role in the control of cellular aging and survival.By similarity

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein BHLHb9
Short name:
bHLHb9
Alternative name(s):
Transcription regulator of 60 kDa
Short name:
p60TRP
Gene namesi
Name:Bhlhb9
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi1303224. Bhlhb9.

Subcellular locationi

  • Cytoplasm By similarity
  • Nucleus By similarity

  • Note: Mainly cytoplasmic, and nuclear at lower level.By similarity

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 539539Protein BHLHb9PRO_0000334665Add
BLAST

Proteomic databases

PaxDbiQ71HP2.
PRIDEiQ71HP2.

Expressioni

Gene expression databases

GenevisibleiQ71HP2. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000042638.

Structurei

3D structure databases

ProteinModelPortaliQ71HP2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GPRASP family.Curated

Phylogenomic databases

eggNOGiENOG410IPU4. Eukaryota.
ENOG41115S9. LUCA.
GeneTreeiENSGT00550000074488.
HOVERGENiHBG098352.
InParanoidiQ71HP2.
OMAiSDPCIQT.
OrthoDBiEOG70PBZ0.
PhylomeDBiQ71HP2.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR006911. ARM-rpt_dom.
IPR016024. ARM-type_fold.
[Graphical view]
PfamiPF04826. Arm_2. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.

Sequencei

Sequence statusi: Complete.

Q71HP2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGSKNKARA QAKLEKRASA QAKAAAEREA ANAGRGAGKN RDKGKGKAGS
60 70 80 90 100
KTDAVAEAKA GSKSKVVAET KEGARPESKA VAKGTSDFNH KAENKYARSA
110 120 130 140 150
RKDKPSSDSW FWAGEDSGIN SWFWKGEEVS NNSVAKCENK PSTSIQARVE
160 170 180 190 200
EHTPRTSHKS RSGAEEEEEE NVIGNWFWEG DDTGFDSDPK PVFKIVKPQP
210 220 230 240 250
VDEINEKDRP KDWSEVTIWP KAPAVTPAVL GYRSQDSSEG RPSSYIVLAS
260 270 280 290 300
NEEETSTTCT KNTRSSLQPI PEYPFGSDPC IQTLDEIRQQ IKIREENGIK
310 320 330 340 350
PFACPCKMEC YLDSPEFEKL VNILKSTTDP LIHKIAQIAM GIHKVHPFAQ
360 370 380 390 400
EFINEVGVVT LIESLLSFSS PEVSIKKAVI TLNSSGDDRQ QMVEFHVKHM
410 420 430 440 450
CKETVSFPLN SPGQQSGLKI IGQLTTESVH HYIVVSYFSE LFHLLSQGNR
460 470 480 490 500
KTRNLVLKVF LNMSENPKAA RDMINMKALA ALKLIFNQKE AKANLVSAVA
510 520 530
IFINIKEHIR KGSIVVVDHL SYNTLTAIFR EVKGIIERM
Length:539
Mass (Da):59,718
Last modified:July 5, 2004 - v1
Checksum:i991568BB794B2677
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF497483 mRNA. Translation: AAQ07247.1.
RefSeqiNP_997494.1. NM_207611.1.
XP_006257335.1. XM_006257273.2.
XP_006257336.1. XM_006257274.2.
XP_006257337.1. XM_006257275.2.
XP_006257338.1. XM_006257276.2.
XP_008771643.1. XM_008773421.1.
UniGeneiRn.154656.

Genome annotation databases

EnsembliENSRNOT00000049375; ENSRNOP00000042638; ENSRNOG00000003191.
GeneIDi317407.
KEGGirno:317407.
UCSCiRGD:1303224. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF497483 mRNA. Translation: AAQ07247.1.
RefSeqiNP_997494.1. NM_207611.1.
XP_006257335.1. XM_006257273.2.
XP_006257336.1. XM_006257274.2.
XP_006257337.1. XM_006257275.2.
XP_006257338.1. XM_006257276.2.
XP_008771643.1. XM_008773421.1.
UniGeneiRn.154656.

3D structure databases

ProteinModelPortaliQ71HP2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000042638.

Proteomic databases

PaxDbiQ71HP2.
PRIDEiQ71HP2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000049375; ENSRNOP00000042638; ENSRNOG00000003191.
GeneIDi317407.
KEGGirno:317407.
UCSCiRGD:1303224. rat.

Organism-specific databases

CTDi80823.
RGDi1303224. Bhlhb9.

Phylogenomic databases

eggNOGiENOG410IPU4. Eukaryota.
ENOG41115S9. LUCA.
GeneTreeiENSGT00550000074488.
HOVERGENiHBG098352.
InParanoidiQ71HP2.
OMAiSDPCIQT.
OrthoDBiEOG70PBZ0.
PhylomeDBiQ71HP2.

Miscellaneous databases

PROiQ71HP2.

Gene expression databases

GenevisibleiQ71HP2. RN.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR006911. ARM-rpt_dom.
IPR016024. ARM-type_fold.
[Graphical view]
PfamiPF04826. Arm_2. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Characterizing the new transcription regulator protein p60TRP."
    Heese K., Yamada T., Akatsu H., Yamamoto T., Kosaka K., Nagai Y., Sawada T.
    J. Cell. Biochem. 91:1030-1042(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].

Entry informationi

Entry nameiBHLH9_RAT
AccessioniPrimary (citable) accession number: Q71HP2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: July 5, 2004
Last modified: June 8, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Caution

Despite its name, no basic helix-loop-helix (bHLH) domain is detected by any prediction tool.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.