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Q70YC5

- ZN365_HUMAN

UniProt

Q70YC5 - ZN365_HUMAN

Protein

Protein ZNF365

Gene

ZNF365

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
    • BLAST
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    • History
      Entry version 88 (01 Oct 2014)
      Sequence version 3 (11 Jan 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: IntAct

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein ZNF365
    Alternative name(s):
    Protein su48
    Gene namesi
    Name:ZNF365
    Synonyms:KIAA0844
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 10

    Organism-specific databases

    HGNCiHGNC:18194. ZNF365.

    Subcellular locationi

    Cytoplasmcytoskeletonmicrotubule organizing centercentrosome 1 Publication
    Note: localizes to the centrosome at all stages of the cell cycle.

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-KW
    2. microtubule organizing center Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm, Cytoskeleton

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA134873576.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 407407Protein ZNF365PRO_0000076374Add
    BLAST

    Proteomic databases

    PRIDEiQ70YC5.

    PTM databases

    PhosphoSiteiQ70YC5.

    Expressioni

    Tissue specificityi

    Isoform 1 is expressed in brain. Isoform 2 is expressed in placenta and at low level in lung and liver. Isoform 3 is expressed in kidney and pancreas.1 Publication

    Gene expression databases

    ArrayExpressiQ70YC5.
    BgeeiQ70YC5.
    CleanExiHS_ZNF365.
    GenevestigatoriQ70YC5.

    Organism-specific databases

    HPAiHPA052446.

    Interactioni

    Subunit structurei

    Homodimer. Interacts with NDE1 and NDEL1. Does not interact with TUBG1.1 Publication

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    NDE1Q9NXR14EBI-941182,EBI-941227

    Protein-protein interaction databases

    BioGridi116557. 2 interactions.
    IntActiQ70YC5. 3 interactions.

    Structurei

    3D structure databases

    ProteinModelPortaliQ70YC5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili169 – 297129Sequence AnalysisAdd
    BLAST

    Keywords - Domaini

    Coiled coil

    Phylogenomic databases

    HOVERGENiHBG094181.
    KOiK16737.
    OMAiKSIHEQA.
    PhylomeDBiQ70YC5.
    TreeFamiTF329439.

    Family and domain databases

    InterProiIPR015880. Znf_C2H2-like.
    [Graphical view]
    SMARTiSM00355. ZnF_C2H2. 1 hit.
    [Graphical view]

    Sequences (6)i

    Sequence statusi: Complete.

    This entry describes 6 isoformsi produced by alternative splicing. Align

    Note: Additional isoforms seem to exist.

    Isoform 1 (identifier: Q70YC5-1) [UniParc]FASTAAdd to Basket

    Also known as: ZNF365A

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MQQKAFEESR YPWQESFENV AVCLPLRCPR CGDHTRFRSL SSLRAHLEFS    50
    HSYEERTLLT KCSLFPSLKD TDLVTSSELL KPGKLQSSGN VVKQKPSYVN 100
    LYSISHEHSK DRKPFEVVAE RPVSYVQTYT AMDLHADSLD GTRSGPGLPT 150
    SDTKASFEAH VREKFNRMVE AVDRTIEKRI DKLTKELAQK TAELLEVRAA 200
    FVQLTQKKQE VQRRERALNR QVDVAVEMIA VLRQRLTESE EELLRKEEEV 250
    VTFNHFLEAA AEKEVQGKAR LQDFIENLLQ RVELAEKQLE YYQSQQASGF 300
    VRDLSGHVLT DISSNRKPKC LSRGHPHSVC NHPDLKAHFH PKGRNHLKKA 350
    KDDRASMQPA KAIHEQAESS RDLCRPPKKG ELLGFGRKGN IRPKMAKKKP 400
    TAIVNII 407
    Length:407
    Mass (Da):46,542
    Last modified:January 11, 2011 - v3
    Checksum:iCC3C25AF6A753E64
    GO
    Isoform 2 (identifier: Q70YC5-2) [UniParc]FASTAAdd to Basket

    Also known as: ZNF365B

    The sequence of this isoform differs from the canonical sequence as follows:
         309-333: LTDISSNRKPKCLSRGHPHSVCNHP → SWKGAGEARLVCQNDLELEESAIVE
         334-407: Missing.

    Show »
    Length:333
    Mass (Da):38,217
    Checksum:i6C143290C74C9BA2
    GO
    Isoform 3 (identifier: Q70YC5-3) [UniParc]FASTAAdd to Basket

    Also known as: ZNF365C

    The sequence of this isoform differs from the canonical sequence as follows:
         309-407: LTDISSNRKP...KKPTAIVNII → SWKGAGEARL...CFPWGLPSSS

    Show »
    Length:462
    Mass (Da):52,501
    Checksum:i52B5B9170F4C1EC5
    GO
    Isoform 5 (identifier: Q70YC5-4) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         1-1: M → MTMRPPQSCEPTFRVM

    Note: No experimental confirmation available.

    Show »
    Length:422
    Mass (Da):48,304
    Checksum:iD9ACEBDD206A5889
    GO
    Isoform 6 (identifier: Q70YC5-5) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         1-356: Missing.

    Note: No experimental confirmation available.

    Show »
    Length:51
    Mass (Da):5,654
    Checksum:iD16DB9DAA8FAD040
    GO
    Isoform 4 (identifier: Q70YC4-1) [UniParc]FASTAAdd to Basket

    Also known as: Talanin, ZNF365D

    The sequence of this isoform can be found in the external entry Q70YC4.
    Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
    Length:216
    Mass (Da):24,036
    GO

    Sequence cautioni

    The sequence AAH17841.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.
    The sequence BAA74867.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti55 – 551E → Q in AAT27443. 1 PublicationCurated

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti337 – 3371A → S.4 Publications
    Corresponds to variant rs3758490 [ dbSNP | Ensembl ].
    VAR_024325

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei1 – 356356Missing in isoform 6. 1 PublicationVSP_016596Add
    BLAST
    Alternative sequencei1 – 11M → MTMRPPQSCEPTFRVM in isoform 5. 1 PublicationVSP_016597
    Alternative sequencei309 – 40799LTDIS…IVNII → SWKGAGEARLVCQNDLELEI FGHINHHLSGLKDSHCLVFL QAPPVPWIILASFLWILGNP WTSSTATAGFSQIWVLFPFC GGTFHHNEKDVLGLQDFERE SVSTSQSRNISLLTLGQLQN CVIGKLTIIDLLTEHLLGVR HGVICFPWGLPSSS in isoform 3. 1 PublicationVSP_016598Add
    BLAST
    Alternative sequencei309 – 33325LTDIS…VCNHP → SWKGAGEARLVCQNDLELEE SAIVE in isoform 2. 1 PublicationVSP_016599Add
    BLAST
    Alternative sequencei334 – 40774Missing in isoform 2. 1 PublicationVSP_016600Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ505147 mRNA. Translation: CAD43726.1.
    AJ505148 mRNA. Translation: CAD43727.1.
    AJ505149 mRNA. Translation: CAD43728.1.
    AB020651 mRNA. Translation: BAA74867.2. Different initiation.
    AK289515 mRNA. Translation: BAF82204.1.
    AK289808 mRNA. Translation: BAF82497.1.
    BX647904 mRNA. Translation: CAI46100.1.
    AC024597 Genomic DNA. No translation available.
    AC024598 Genomic DNA. No translation available.
    BC017841 mRNA. Translation: AAH17841.1. Sequence problems.
    BC035049 mRNA. Translation: AAH35049.1.
    BC060817 mRNA. Translation: AAH60817.1.
    AY547355 Genomic DNA. Translation: AAT27443.1.
    CCDSiCCDS31209.1. [Q70YC5-1]
    CCDS41531.1. [Q70YC5-2]
    CCDS7264.1. [Q70YC5-3]
    RefSeqiNP_055766.2. NM_014951.2. [Q70YC5-1]
    NP_955522.1. NM_199450.2. [Q70YC5-2]
    NP_955523.1. NM_199451.2. [Q70YC5-3]
    UniGeneiHs.22653.

    Genome annotation databases

    EnsembliENST00000395254; ENSP00000378674; ENSG00000138311. [Q70YC5-1]
    ENST00000395255; ENSP00000378675; ENSG00000138311. [Q70YC5-2]
    ENST00000410046; ENSP00000387091; ENSG00000138311. [Q70YC5-3]
    GeneIDi22891.
    KEGGihsa:22891.
    UCSCiuc001jly.4. human. [Q70YC5-4]
    uc001jlz.4. human. [Q70YC5-1]
    uc001jmb.4. human. [Q70YC5-2]
    uc001jmc.2. human. [Q70YC5-3]

    Polymorphism databases

    DMDMi317373495.

    Keywords - Coding sequence diversityi

    Alternative splicing, Polymorphism

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ505147 mRNA. Translation: CAD43726.1 .
    AJ505148 mRNA. Translation: CAD43727.1 .
    AJ505149 mRNA. Translation: CAD43728.1 .
    AB020651 mRNA. Translation: BAA74867.2 . Different initiation.
    AK289515 mRNA. Translation: BAF82204.1 .
    AK289808 mRNA. Translation: BAF82497.1 .
    BX647904 mRNA. Translation: CAI46100.1 .
    AC024597 Genomic DNA. No translation available.
    AC024598 Genomic DNA. No translation available.
    BC017841 mRNA. Translation: AAH17841.1 . Sequence problems.
    BC035049 mRNA. Translation: AAH35049.1 .
    BC060817 mRNA. Translation: AAH60817.1 .
    AY547355 Genomic DNA. Translation: AAT27443.1 .
    CCDSi CCDS31209.1. [Q70YC5-1 ]
    CCDS41531.1. [Q70YC5-2 ]
    CCDS7264.1. [Q70YC5-3 ]
    RefSeqi NP_055766.2. NM_014951.2. [Q70YC5-1 ]
    NP_955522.1. NM_199450.2. [Q70YC5-2 ]
    NP_955523.1. NM_199451.2. [Q70YC5-3 ]
    UniGenei Hs.22653.

    3D structure databases

    ProteinModelPortali Q70YC5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 116557. 2 interactions.
    IntActi Q70YC5. 3 interactions.

    PTM databases

    PhosphoSitei Q70YC5.

    Polymorphism databases

    DMDMi 317373495.

    Proteomic databases

    PRIDEi Q70YC5.

    Protocols and materials databases

    DNASUi 22891.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000395254 ; ENSP00000378674 ; ENSG00000138311 . [Q70YC5-1 ]
    ENST00000395255 ; ENSP00000378675 ; ENSG00000138311 . [Q70YC5-2 ]
    ENST00000410046 ; ENSP00000387091 ; ENSG00000138311 . [Q70YC5-3 ]
    GeneIDi 22891.
    KEGGi hsa:22891.
    UCSCi uc001jly.4. human. [Q70YC5-4 ]
    uc001jlz.4. human. [Q70YC5-1 ]
    uc001jmb.4. human. [Q70YC5-2 ]
    uc001jmc.2. human. [Q70YC5-3 ]

    Organism-specific databases

    CTDi 22891.
    GeneCardsi GC10P064133.
    HGNCi HGNC:18194. ZNF365.
    HPAi HPA052446.
    MIMi 607818. gene.
    neXtProti NX_Q70YC5.
    PharmGKBi PA134873576.
    HUGEi Search...
    GenAtlasi Search...

    Phylogenomic databases

    HOVERGENi HBG094181.
    KOi K16737.
    OMAi KSIHEQA.
    PhylomeDBi Q70YC5.
    TreeFami TF329439.

    Miscellaneous databases

    GenomeRNAii 22891.
    NextBioi 43497.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q70YC5.
    Bgeei Q70YC5.
    CleanExi HS_ZNF365.
    Genevestigatori Q70YC5.

    Family and domain databases

    InterProi IPR015880. Znf_C2H2-like.
    [Graphical view ]
    SMARTi SM00355. ZnF_C2H2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Identification of a novel gene and a common variant associated with uric acid nephrolithiasis in a Sardinian genetic isolate."
      Gianfrancesco F., Esposito T., Ombra M.N., Forabosco P., Maninchedda G., Fattorini M., Casula S., Vaccargiu S., Casu G., Cardia F., Deiana I., Melis P., Falchi M., Pirastu M.
      Am. J. Hum. Genet. 72:1479-1491(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2 AND 3), VARIANT SER-337, TISSUE SPECIFICITY.
      Tissue: Kidney.
    2. "Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro."
      Nagase T., Ishikawa K., Suyama M., Kikuno R., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O.
      DNA Res. 5:355-364(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT SER-337.
      Tissue: Brain.
    3. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT SER-337.
      Tissue: Brain and Cerebellum.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5), VARIANT SER-337.
      Tissue: Cervix.
    5. "The DNA sequence and comparative analysis of human chromosome 10."
      Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
      , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
      Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    6. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 6), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-394 (ISOFORM 1).
      Tissue: Brain and Lung.
    7. Anitha A., Nakamura K., Mori N.
      Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-247.
    8. "Emergence of talanin protein associated with human uric acid nephrolithiasis in the hominidae lineage."
      Gianfrancesco F., Esposito T., Casu G., Maninchedda G., Roberto R., Parastu M.
      Gene 339:131-138(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: ALTERNATIVE SPLICING.
    9. "Centrosomal proteins Nde1 and Su48 form a complex regulated by phosphorylation."
      Hirohashi Y., Wang Q., Liu Q., Li B., Du X., Zhang H., Furuuchi K., Masuda K., Sato N., Greene M.I.
      Oncogene 25:6048-6055(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH NDE1 AND NDEL1.
    10. "Characterization of Su48, a centrosome protein essential for cell division."
      Wang Q., Du X., Meinkoth J., Hirohashi Y., Zhang H., Liu Q., Richter M., Greene M.I.
      Proc. Natl. Acad. Sci. U.S.A. 103:6512-6517(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: HOMODIMERIZATION, SUBCELLULAR LOCATION.

    Entry informationi

    Entry nameiZN365_HUMAN
    AccessioniPrimary (citable) accession number: Q70YC5
    Secondary accession number(s): A8K0F0
    , O94930, Q05D75, Q5HYE6, Q68SG8, Q6NSK2, Q6P9D4, Q70YC6, Q70YC7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 20, 2005
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 88 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 10
      Human chromosome 10: entries, gene names and cross-references to MIM
    2. Human entries with polymorphisms or disease mutations
      List of human entries with polymorphisms or disease mutations
    3. Human polymorphisms and disease mutations
      Index of human polymorphisms and disease mutations
    4. MIM cross-references
      Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

    External Data

    Dasty 3