Q70LE5 (Y059A_AFV1Y) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative zinc finger protein ORF59a

Gene names

ORF Names:

ORF59a

Organism

Acidianus filamentous virus 1 (isolate United States/Yellowstone) (AFV-1) [Reference proteome]

Taxonomic identifier

654909 [NCBI]

Taxonomic lineage

Viruses › dsDNA viruses, no RNA stage › Lipothrixviridae › Gammalipothrixvirus › Acidianus filamentous virus 1

Virus host

Acidianus hospitalis [TaxID: 563177]
Acidianus infernus [TaxID: 12915]

Protein attributes

Sequence length	59 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 C2H2-type zinc finger.

Ontologies

Keywords
Domain	Zinc-finger
Ligand	Metal-binding Zinc
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 59

59

Putative zinc finger protein ORF59a

PRO_0000384536

Regions

Zinc finger

11 – 33

23

C2H2-type; degenerate

Secondary structure

1

.

.

.

.

.

.

.

.

.

.

.

59

Helix Strand Turn

Details...

Beta strand

8 – 13

6

Turn

14 – 16

3

Beta strand

19 – 22

4

Helix

23 – 32

10

Helix

41 – 43

3

Beta strand

45 – 50

6

Sequences

	Sequence		Length	Mass (Da)
	Q70LE5 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 2DA887A8FFD5F2D1	FASTA	59	7,000
	10 20 30 40 50 MIEVSSMERV YQCLRCGLTF RTKKQLIRHL VNTEKVNPLS IDYYYQSFSV SLKDVNKII

References

[1]	"AFV1, a novel virus infecting hyperthermophilic archaea of the genus acidianus." Bettstetter M., Peng X., Garrett R.A., Prangishvili D. Virology 315:68-79(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AJ567472 Genomic DNA. Translation: CAD98935.1.

RefSeq

YP_003731.1. NC_005830.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2LVH	NMR	-	A	1-59	[»]

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

2769185.

Phylogenomic databases

ProtClustDB

PHA0616.

Family and domain databases

Gene3D

3.30.160.60. 1 hit.

InterPro

IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]

Pfam

PF00096. zf-C2H2. 1 hit.
[Graphical view]

SMART

SM00355. ZnF_C2H2. 1 hit.
[Graphical view]

PROSITE

PS00028. ZINC_FINGER_C2H2_1. False negative.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Y059A_AFV1Y

Accession

Primary (citable) accession number: Q70LE5

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 22, 2009
Last sequence update:	July 5, 2004
Last modified:	May 1, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Viral Protein Annotation Program