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Q70LE5

- Y059A_AFV1Y

UniProt

Q70LE5 - Y059A_AFV1Y

Protein

Putative zinc finger protein ORF59a

Gene

ORF59a

Organism
Acidianus filamentous virus 1 (isolate United States/Yellowstone) (AFV-1)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri11 – 3323C2H2-type; degeneratePROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. nucleic acid binding Source: InterPro

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative zinc finger protein ORF59a
    Gene namesi
    ORF Names:ORF59a
    OrganismiAcidianus filamentous virus 1 (isolate United States/Yellowstone) (AFV-1)
    Taxonomic identifieri654909 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageLigamenviralesLipothrixviridaeGammalipothrixvirus
    Virus hostiAcidianus hospitalis [TaxID: 563177]
    Acidianus infernus [TaxID: 12915]
    ProteomesiUP000000514: Genome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 5959Putative zinc finger protein ORF59aPRO_0000384536Add
    BLAST

    Structurei

    Secondary structure

    1
    59
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi8 – 136
    Turni14 – 163
    Beta strandi19 – 224
    Helixi23 – 3210
    Helixi41 – 433
    Beta strandi45 – 506

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2LVHNMR-A1-59[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 C2H2-type zinc finger.PROSITE-ProRule annotation

    Zinc finger

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri11 – 3323C2H2-type; degeneratePROSITE-ProRule annotationAdd
    BLAST

    Keywords - Domaini

    Zinc-finger

    Family and domain databases

    Gene3Di3.30.160.60. 1 hit.
    InterProiIPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    PfamiPF00096. zf-C2H2. 1 hit.
    [Graphical view]
    SMARTiSM00355. ZnF_C2H2. 1 hit.
    [Graphical view]
    PROSITEiPS50157. ZINC_FINGER_C2H2_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q70LE5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIEVSSMERV YQCLRCGLTF RTKKQLIRHL VNTEKVNPLS IDYYYQSFSV   50
    SLKDVNKII 59
    Length:59
    Mass (Da):7,000
    Last modified:July 5, 2004 - v1
    Checksum:i2DA887A8FFD5F2D1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ567472 Genomic DNA. Translation: CAD98935.1.
    RefSeqiYP_003731.1. NC_005830.1.

    Genome annotation databases

    GeneIDi2769185.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ567472 Genomic DNA. Translation: CAD98935.1 .
    RefSeqi YP_003731.1. NC_005830.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2LVH NMR - A 1-59 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 2769185.

    Family and domain databases

    Gene3Di 3.30.160.60. 1 hit.
    InterProi IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    Pfami PF00096. zf-C2H2. 1 hit.
    [Graphical view ]
    SMARTi SM00355. ZnF_C2H2. 1 hit.
    [Graphical view ]
    PROSITEi PS50157. ZINC_FINGER_C2H2_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "AFV1, a novel virus infecting hyperthermophilic archaea of the genus acidianus."
      Bettstetter M., Peng X., Garrett R.A., Prangishvili D.
      Virology 315:68-79(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

    Entry informationi

    Entry nameiY059A_AFV1Y
    AccessioniPrimary (citable) accession number: Q70LE5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 22, 2009
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3