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Protein

Ethylene-responsive transcription factor ERF110

Gene

ERF110

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi76 – 13358AP2/ERFPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

  • ethylene-activated signaling pathway Source: UniProtKB-KW
  • positive regulation of transcription, DNA-templated Source: TAIR
  • regulation of timing of transition from vegetative to reproductive phase Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Ethylene signaling pathway, Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ethylene-responsive transcription factor ERF110
Gene namesi
Name:ERF110
Ordered Locus Names:At5g50080
ORF Names:MPF21.9
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G50080.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 220220Ethylene-responsive transcription factor ERF110PRO_0000290422Add
BLAST

Proteomic databases

PaxDbiQ70II3.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G50080.1.

Structurei

3D structure databases

ProteinModelPortaliQ70II3.
SMRiQ70II3. Positions 75-133.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 AP2/ERF DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410J4AH. Eukaryota.
ENOG410YY7D. LUCA.
HOGENOMiHOG000210042.
InParanoidiQ70II3.
OMAiEDLINYW.
OrthoDBiEOG09360S7Z.
PhylomeDBiQ70II3.

Family and domain databases

Gene3Di3.30.730.10. 1 hit.
InterProiIPR001471. AP2/ERF_dom.
IPR016177. DNA-bd_dom.
[Graphical view]
PfamiPF00847. AP2. 1 hit.
[Graphical view]
PRINTSiPR00367. ETHRSPELEMNT.
SMARTiSM00380. AP2. 1 hit.
[Graphical view]
SUPFAMiSSF54171. SSF54171. 1 hit.
PROSITEiPS51032. AP2_ERF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q70II3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAMVSALTQ VVSARSQTEA EGAHSSSSSA GHKRGWLGID SAPIPSSFAR
60 70 80 90 100
VDSSHNPIEE SMSKAFPEEA REKKRRYRGV RQRPWGKWAA EIRDPHRAAR
110 120 130 140 150
VWLGTFDTAE AAARAYDEAA LRFRGNKAKL NFPEDVRILP PPPPLLRSPA
160 170 180 190 200
DTVANKAEED LINYWSYTKL LQSSGQRSFL ERGQEESSNI FEHSPMEQPL
210 220
PPSSSGPSSS NFPAPSLPNT
Length:220
Mass (Da):24,257
Last modified:June 12, 2007 - v2
Checksum:i921E0520615FF3E9
GO

Sequence cautioni

The sequence BAB10294 differs from that shown. Reason: Erroneous gene model prediction. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti35 – 351G → E in CAE45640 (Ref. 1) Curated
Sequence conflicti42 – 421A → V in CAE45640 (Ref. 1) Curated
Sequence conflicti62 – 632MS → IR in CAE45640 (Ref. 1) Curated
Sequence conflicti188 – 1881S → N in CAE45640 (Ref. 1) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ580378 mRNA. Translation: CAE45640.1.
AB026650 Genomic DNA. Translation: BAB10294.1. Sequence problems.
CP002688 Genomic DNA. Translation: AED95893.1.
RefSeqiNP_199819.3. NM_124387.3.
UniGeneiAt.29751.

Genome annotation databases

EnsemblPlantsiAT5G50080.1; AT5G50080.1; AT5G50080.
GeneIDi835072.
GrameneiAT5G50080.1; AT5G50080.1; AT5G50080.
KEGGiath:AT5G50080.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ580378 mRNA. Translation: CAE45640.1.
AB026650 Genomic DNA. Translation: BAB10294.1. Sequence problems.
CP002688 Genomic DNA. Translation: AED95893.1.
RefSeqiNP_199819.3. NM_124387.3.
UniGeneiAt.29751.

3D structure databases

ProteinModelPortaliQ70II3.
SMRiQ70II3. Positions 75-133.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G50080.1.

Proteomic databases

PaxDbiQ70II3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G50080.1; AT5G50080.1; AT5G50080.
GeneIDi835072.
GrameneiAT5G50080.1; AT5G50080.1; AT5G50080.
KEGGiath:AT5G50080.

Organism-specific databases

TAIRiAT5G50080.

Phylogenomic databases

eggNOGiENOG410J4AH. Eukaryota.
ENOG410YY7D. LUCA.
HOGENOMiHOG000210042.
InParanoidiQ70II3.
OMAiEDLINYW.
OrthoDBiEOG09360S7Z.
PhylomeDBiQ70II3.

Miscellaneous databases

PROiQ70II3.

Family and domain databases

Gene3Di3.30.730.10. 1 hit.
InterProiIPR001471. AP2/ERF_dom.
IPR016177. DNA-bd_dom.
[Graphical view]
PfamiPF00847. AP2. 1 hit.
[Graphical view]
PRINTSiPR00367. ETHRSPELEMNT.
SMARTiSM00380. AP2. 1 hit.
[Graphical view]
SUPFAMiSSF54171. SSF54171. 1 hit.
PROSITEiPS51032. AP2_ERF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiEF110_ARATH
AccessioniPrimary (citable) accession number: Q70II3
Secondary accession number(s): Q9FGA3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 12, 2007
Last sequence update: June 12, 2007
Last modified: September 7, 2016
This is version 75 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.