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Q70EL1

- UBP54_HUMAN

UniProt

Q70EL1 - UBP54_HUMAN

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Protein

Inactive ubiquitin carboxyl-terminal hydrolase 54

Gene

USP54

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli

Functioni

Has no peptidase activity.

GO - Molecular functioni

  1. ubiquitinyl hydrolase activity Source: InterPro

GO - Biological processi

  1. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Protein family/group databases

MEROPSiC19.080.

Names & Taxonomyi

Protein namesi
Recommended name:
Inactive ubiquitin carboxyl-terminal hydrolase 54
Alternative name(s):
Inactive ubiquitin-specific peptidase 54
Gene namesi
Name:USP54
Synonyms:C10orf29
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 10

Organism-specific databases

HGNCiHGNC:23513. USP54.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134959960.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 16841684Inactive ubiquitin carboxyl-terminal hydrolase 54PRO_0000249530Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei671 – 6711Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ70EL1.
PaxDbiQ70EL1.
PRIDEiQ70EL1.

Expressioni

Tissue specificityi

Weakly expressed in a few tissues.1 Publication

Gene expression databases

BgeeiQ70EL1.
CleanExiHS_USP54.
ExpressionAtlasiQ70EL1. baseline and differential.
GenevestigatoriQ70EL1.

Organism-specific databases

HPAiHPA047663.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
ATXN1P542533EBI-946185,EBI-930964

Protein-protein interaction databases

BioGridi127739. 17 interactions.
IntActiQ70EL1. 20 interactions.
MINTiMINT-6946944.

Structurei

3D structure databases

ProteinModelPortaliQ70EL1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini31 – 352322USPAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili736 – 77035Sequence AnalysisAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi559 – 57012Poly-SerAdd
BLAST
Compositional biasi866 – 8694Poly-Gln

Sequence similaritiesi

Belongs to the peptidase C19 family.Curated
Contains 1 USP domain.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG291259.
GeneTreeiENSGT00440000033513.
HOVERGENiHBG108646.
InParanoidiQ70EL1.
OMAiNCGERIR.
PhylomeDBiQ70EL1.
TreeFamiTF336130.

Family and domain databases

Gene3Di1.20.58.280. 1 hit.
InterProiIPR007330. MIT.
IPR001394. Peptidase_C19_UCH.
IPR028889. UCH/PAN2.
[Graphical view]
PfamiPF00443. UCH. 1 hit.
[Graphical view]
PROSITEiPS50235. USP_3. 1 hit.
[Graphical view]

Sequences (7)i

Sequence statusi: Complete.

This entry describes 7 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q70EL1-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MSWKRNYFSG GRGSVQGMFA PRSSTSIAPS KGLSNEPGQN SCFLNSALQV
60 70 80 90 100
LWHLDIFRRS FRQLTTHKCM GDSCIFCALK GIFNQFQCSS EKVLPSDTLR
110 120 130 140 150
SALAKTFQDE QRFQLGIMDD AAECFENLLM RIHFHIADET KEDICTAQHC
160 170 180 190 200
ISHQKFAMTL FEQCVCTSCG ATSDPLPFIQ MVHYISTTSL CNQAICMLER
210 220 230 240 250
REKPSPSMFG ELLQNASTMG DLRNCPSNCG ERIRIRRVLM NAPQIITIGL
260 270 280 290 300
VWDSDHSDLA EDVIHSLGTC LKLGDLFFRV TDDRAKQSEL YLVGMICYYG
310 320 330 340 350
KHYSTFFFQT KIRKWMYFDD AHVKEIGPKW KDVVTKCIKG HYQPLLLLYA
360 370 380 390 400
DPQGTPVSTQ DLPPQAEFQS YSRTCYDSED SGREPSISSD TRTDSSTESY
410 420 430 440 450
PYKHSHHESV VSHFSSDSQG TVIYNVENDS MSQSSRDTGH LTDSECNQKH
460 470 480 490 500
TSKKGSLIER KRSSGRVRRK GDEPQASGYH SEGETLKEKQ APRNASKPSS
510 520 530 540 550
STNRLRDFKE TVSNMIHNRP SLASQTNVGS HCRGRGGDQP DKKPPRTLPL
560 570 580 590 600
HSRDWEIEST SSESKSSSSS KYRPTWRPKR ESLNIDSIFS KDKRKHCGYT
610 620 630 640 650
QLSPFSEDSA KEFIPDEPSK PPSYDIKFGG PSPQYKRWGP ARPGSHLLEQ
660 670 680 690 700
HPRLIQRMES GYESSERNSS SPVSLDAALP ESSNVYRDPS AKRSAGLVPS
710 720 730 740 750
WRHIPKSHSS SILEVDSTAS MGGWTKSQPF SGEEISSKSE LDELQEEVAR
760 770 780 790 800
RAQEQELRRK REKELEAAKG FNPHPSRFMD LDELQNQGRS DGFERSLQEA
810 820 830 840 850
ESVFEESLHL EQKGDCAAAL ALCNEAISKL RLALHGASCS THSRALVDKK
860 870 880 890 900
LQISIRKARS LQDRMQQQQS PQQPSQPSAC LPTQAGTLSQ PTSEQPIPLQ
910 920 930 940 950
VLLSQEAQLE SGMDTEFGAS SFFHSPASCH ESHSSLSPES SAPQHSSPSR
960 970 980 990 1000
SALKLLTSVE VDNIEPSAFH RQGLPKAPGW TEKNSHHSWE PLDAPEGKLQ
1010 1020 1030 1040 1050
GSRCDNSSCS KLPPQEGRGI AQEQLFQEKK DPANPSPVMP GIATSERGDE
1060 1070 1080 1090 1100
HSLGCSPSNS SAQPSLPLYR TCHPIMPVAS SFVLHCPDPV QKTNQCLQGQ
1110 1120 1130 1140 1150
SLKTSLTLKV DRGSEETYRP EFPSTKGLVR SLAEQFQRMQ GVSMRDSTGF
1160 1170 1180 1190 1200
KDRSLSGSLR KNSSPSDSKP PFSQGQEKGH WPWAKQQSSL EGGDRPLSWE
1210 1220 1230 1240 1250
ESTEHSSLAL NSGLPNGETS SGGQPRLAEP DIYQEKLSQV RDVRSKDLGS
1260 1270 1280 1290 1300
STDLGTSLPL DSWVNITRFC DSQLKHGAPR PGMKSSPHDS HTCVTYPERN
1310 1320 1330 1340 1350
HILLHPHWNQ DTEQETSELE SLYQASLQAS QAGCSGWGQQ DTAWHPLSQT
1360 1370 1380 1390 1400
GSADGMGRRL HSAHDPGLSK TSTAEMEHGL HEARTVRTSQ ATPCRGLSRE
1410 1420 1430 1440 1450
CGEDEQYSAE NLRRISRSLS GTVVSEREEA PVSSHSFDSS NVRKPLETGH
1460 1470 1480 1490 1500
RCSSSSSLPV IHDPSVFLLG PQLYLPQPQF LSPDVLMPTM AGEPNRLPGT
1510 1520 1530 1540 1550
SRSVQQFLAM CDRGETSQGA KYTGRTLNYQ SLPHRSRTDN SWAPWSETNQ
1560 1570 1580 1590 1600
HIGTRFLTTP GCNPQLTYTA TLPERSKGLQ VPHTQSWSDL FHSPSHPPIV
1610 1620 1630 1640 1650
HPVYPPSSSL HVPLRSAWNS DPVPGSRTPG PRRVDMPPDD DWRQSSYASH
1660 1670 1680
SGHRRTVGEG FLFVLSDAPR REQIRARVLQ HSQW
Length:1,684
Mass (Da):187,388
Last modified:November 25, 2008 - v4
Checksum:i853D9CFCB35C63C4
GO
Isoform 2 (identifier: Q70EL1-4) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     383-403: REPSISSDTRTDSSTESYPYK → EQPGSLPLLSPHPMRSNSWDS
     404-1684: Missing.

Note: No experimental confirmation available.

Show »
Length:403
Mass (Da):45,703
Checksum:i2749CBBCC8AF37A9
GO
Isoform 3 (identifier: Q70EL1-6) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     893-893: S → R
     894-1684: Missing.

Note: No experimental confirmation available.

Show »
Length:893
Mass (Da):100,476
Checksum:i7D1C84A450FEB447
GO
Isoform 4 (identifier: Q70EL1-7) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     126-275: Missing.

Note: No experimental confirmation available.

Show »
Length:1,534
Mass (Da):170,581
Checksum:iB00DC48D0DE75BC3
GO
Isoform 5 (identifier: Q70EL1-8) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-912: Missing.

Show »
Length:772
Mass (Da):84,938
Checksum:iA41B0ACF854B4AF2
GO
Isoform 6 (identifier: Q70EL1-9) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-912: Missing.
     1391-1437: Missing.

Show »
Length:725
Mass (Da):79,771
Checksum:i98EFA86D1005C89F
GO
Isoform 7 (identifier: Q70EL1-10) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-912: Missing.
     1386-1390: Missing.

Show »
Length:767
Mass (Da):84,366
Checksum:iC622D8C5CE11DDF3
GO

Sequence cautioni

The sequence BX649087 differs from that shown. Reason: Frameshift at position 508.
The sequence BAC04393.1 differs from that shown. Reason: Erroneous initiation.
The sequence BAG53943.1 differs from that shown. Reason: Erroneous initiation.
The sequence CAO03507.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence CAO03508.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence CAO03509.1 differs from that shown. Reason: Erroneous gene model prediction.

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti110 – 1112EQ → KE in BX649087. (PubMed:17974005)Curated
Sequence conflicti191 – 1911C → S in CAE47747. (PubMed:14715245)Curated
Sequence conflicti226 – 2261P → L in BX649087. (PubMed:17974005)Curated
Sequence conflicti733 – 7331E → G in BX649087. (PubMed:17974005)Curated
Sequence conflicti1345 – 13451H → P in BAC04393. (PubMed:14702039)Curated
Sequence conflicti1425 – 14251S → P in BAC86566. (PubMed:14702039)Curated
Sequence conflicti1438 – 14381D → H in AAI30634. (PubMed:15489334)Curated

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti505 – 5051L → V in a breast cancer sample; somatic mutation. 1 Publication
VAR_036360
Natural varianti976 – 9761K → E.
Corresponds to variant rs1618542 [ dbSNP | Ensembl ].
VAR_047258
Natural varianti1231 – 12311D → N.
Corresponds to variant rs4619071 [ dbSNP | Ensembl ].
VAR_047259
Natural varianti1367 – 13671G → D.
Corresponds to variant rs7083344 [ dbSNP | Ensembl ].
VAR_047260

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 912912Missing in isoform 5, isoform 6 and isoform 7. 2 PublicationsVSP_035674Add
BLAST
Alternative sequencei126 – 275150Missing in isoform 4. CuratedVSP_029922Add
BLAST
Alternative sequencei383 – 40321REPSI…SYPYK → EQPGSLPLLSPHPMRSNSWD S in isoform 2. 1 PublicationVSP_026525Add
BLAST
Alternative sequencei404 – 16841281Missing in isoform 2. 1 PublicationVSP_026526Add
BLAST
Alternative sequencei893 – 8931S → R in isoform 3. 1 PublicationVSP_035675
Alternative sequencei894 – 1684791Missing in isoform 3. 1 PublicationVSP_035676Add
BLAST
Alternative sequencei1386 – 13905Missing in isoform 7. 1 PublicationVSP_035677
Alternative sequencei1391 – 143747Missing in isoform 6. 2 PublicationsVSP_035678Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ583820 mRNA. Translation: CAE47747.1.
AK094637 mRNA. Translation: BAC04393.1. Different initiation.
AK123711 mRNA. Translation: BAG53943.1. Different initiation.
AK126497 mRNA. Translation: BAC86566.1.
AK127213 mRNA. Translation: BAC86886.1.
AK127267 mRNA. Translation: BAC86907.1.
BX649087 mRNA. No translation available.
AC073389 Genomic DNA. No translation available.
AL359074 Genomic DNA. Translation: CAO03506.1.
AL359074 Genomic DNA. Translation: CAO03507.1. Sequence problems.
AL359074 Genomic DNA. Translation: CAO03508.1. Sequence problems.
AL359074 Genomic DNA. Translation: CAO03509.1. Sequence problems.
BC064967 mRNA. Translation: AAH64967.1.
BC130633 mRNA. Translation: AAI30634.1.
CCDSiCCDS7329.2. [Q70EL1-1]
RefSeqiNP_689799.3. NM_152586.3. [Q70EL1-1]
UniGeneiHs.657355.

Genome annotation databases

EnsembliENST00000339859; ENSP00000345216; ENSG00000166348. [Q70EL1-1]
ENST00000408019; ENSP00000386080; ENSG00000166348. [Q70EL1-1]
ENST00000422491; ENSP00000407368; ENSG00000166348. [Q70EL1-9]
GeneIDi159195.
KEGGihsa:159195.
UCSCiuc001juk.3. human. [Q70EL1-8]
uc001jul.3. human. [Q70EL1-9]
uc001juo.3. human. [Q70EL1-1]
uc001jup.3. human. [Q70EL1-6]

Polymorphism databases

DMDMi215274237.

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ583820 mRNA. Translation: CAE47747.1 .
AK094637 mRNA. Translation: BAC04393.1 . Different initiation.
AK123711 mRNA. Translation: BAG53943.1 . Different initiation.
AK126497 mRNA. Translation: BAC86566.1 .
AK127213 mRNA. Translation: BAC86886.1 .
AK127267 mRNA. Translation: BAC86907.1 .
BX649087 mRNA. No translation available.
AC073389 Genomic DNA. No translation available.
AL359074 Genomic DNA. Translation: CAO03506.1 .
AL359074 Genomic DNA. Translation: CAO03507.1 . Sequence problems.
AL359074 Genomic DNA. Translation: CAO03508.1 . Sequence problems.
AL359074 Genomic DNA. Translation: CAO03509.1 . Sequence problems.
BC064967 mRNA. Translation: AAH64967.1 .
BC130633 mRNA. Translation: AAI30634.1 .
CCDSi CCDS7329.2. [Q70EL1-1 ]
RefSeqi NP_689799.3. NM_152586.3. [Q70EL1-1 ]
UniGenei Hs.657355.

3D structure databases

ProteinModelPortali Q70EL1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 127739. 17 interactions.
IntActi Q70EL1. 20 interactions.
MINTi MINT-6946944.

Protein family/group databases

MEROPSi C19.080.

Polymorphism databases

DMDMi 215274237.

Proteomic databases

MaxQBi Q70EL1.
PaxDbi Q70EL1.
PRIDEi Q70EL1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000339859 ; ENSP00000345216 ; ENSG00000166348 . [Q70EL1-1 ]
ENST00000408019 ; ENSP00000386080 ; ENSG00000166348 . [Q70EL1-1 ]
ENST00000422491 ; ENSP00000407368 ; ENSG00000166348 . [Q70EL1-9 ]
GeneIDi 159195.
KEGGi hsa:159195.
UCSCi uc001juk.3. human. [Q70EL1-8 ]
uc001jul.3. human. [Q70EL1-9 ]
uc001juo.3. human. [Q70EL1-1 ]
uc001jup.3. human. [Q70EL1-6 ]

Organism-specific databases

CTDi 159195.
GeneCardsi GC10M075257.
HGNCi HGNC:23513. USP54.
HPAi HPA047663.
neXtProti NX_Q70EL1.
PharmGKBi PA134959960.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG291259.
GeneTreei ENSGT00440000033513.
HOVERGENi HBG108646.
InParanoidi Q70EL1.
OMAi NCGERIR.
PhylomeDBi Q70EL1.
TreeFami TF336130.

Miscellaneous databases

ChiTaRSi USP54. human.
GenomeRNAii 159195.
NextBioi 87894.
PROi Q70EL1.

Gene expression databases

Bgeei Q70EL1.
CleanExi HS_USP54.
ExpressionAtlasi Q70EL1. baseline and differential.
Genevestigatori Q70EL1.

Family and domain databases

Gene3Di 1.20.58.280. 1 hit.
InterProi IPR007330. MIT.
IPR001394. Peptidase_C19_UCH.
IPR028889. UCH/PAN2.
[Graphical view ]
Pfami PF00443. UCH. 1 hit.
[Graphical view ]
PROSITEi PS50235. USP_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and enzymatic analysis of 22 novel human ubiquitin-specific proteases."
    Quesada V., Diaz-Perales A., Gutierrez-Fernandez A., Garabaya C., Cal S., Lopez-Otin C.
    Biochem. Biophys. Res. Commun. 314:54-62(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), LACK OF ENZYME ACTIVITY, TISSUE SPECIFICITY.
  2. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 5; 6 AND 7).
    Tissue: Amygdala, Hippocampus, Lung and Uterus.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3).
    Tissue: Fetal liver.
  4. "The DNA sequence and comparative analysis of human chromosome 10."
    Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
    , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
    Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 6).
    Tissue: Skin.
  6. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-671, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.
  7. "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
    Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.
    Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  8. Cited for: VARIANT [LARGE SCALE ANALYSIS] VAL-505.

Entry informationi

Entry nameiUBP54_HUMAN
AccessioniPrimary (citable) accession number: Q70EL1
Secondary accession number(s): A1L4Q4
, A3KFK3, A3KFK5, A3KFK6, A3KFK7, A6PVS4, A6PVS5, A6PVS6, A6PVS7, B3KVY1, B9ZVM1, Q5F2F4, Q6P1N6, Q6ZSP1, Q6ZSR1, Q6ZTM0, Q8N1X2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 19, 2006
Last sequence update: November 25, 2008
Last modified: October 29, 2014
This is version 84 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 10
    Human chromosome 10: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. Peptidase families
    Classification of peptidase families and list of entries
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3