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Protein

Xin actin-binding repeat-containing protein 1

Gene

XIRP1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Protects actin filaments from depolymerization.1 Publication

GO - Molecular functioni

  • poly(A) RNA binding Source: UniProtKB

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Actin-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Xin actin-binding repeat-containing protein 1
Alternative name(s):
Cardiomyopathy-associated protein 1
Gene namesi
Name:XIRP1
Synonyms:CMYA1, XIN
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 3

Organism-specific databases

HGNCiHGNC:14301. XIRP1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell junction

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162409336.

Polymorphism and mutation databases

BioMutaiXIRP1.
DMDMi74712579.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 18431843Xin actin-binding repeat-containing protein 1PRO_0000316983Add
BLAST

Proteomic databases

PaxDbiQ702N8.
PRIDEiQ702N8.

PTM databases

PhosphoSiteiQ702N8.

Expressioni

Tissue specificityi

Isoform A, isoform B and isoform C are expressed in heart.1 Publication

Gene expression databases

BgeeiQ702N8.
GenevisibleiQ702N8. HS.

Organism-specific databases

HPAiCAB026391.
HPA016750.
HPA018458.

Interactioni

Subunit structurei

Interacts with CTNNB1 (By similarity). Interacts with F-actin, FLNC and VASP.By similarity2 Publications

Binary interactionsi

WithEntry#Exp.IntActNotes
FLNCQ143154EBI-7851194,EBI-489954
VASPP505525EBI-7851194,EBI-748201

Protein-protein interaction databases

BioGridi127921. 7 interactions.
IntActiQ702N8. 5 interactions.
MINTiMINT-8330054.

Structurei

3D structure databases

ProteinModelPortaliQ702N8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati89 – 10416Xin 1Add
BLAST
Repeati121 – 13616Xin 2Add
BLAST
Repeati151 – 16616Xin 3Add
BLAST
Repeati186 – 20116Xin 4Add
BLAST
Repeati226 – 24116Xin 5Add
BLAST
Repeati264 – 27916Xin 6Add
BLAST
Repeati302 – 31716Xin 7Add
BLAST
Repeati340 – 35516Xin 8Add
BLAST
Repeati376 – 39116Xin 9Add
BLAST
Repeati436 – 45116Xin 10Add
BLAST
Repeati507 – 52216Xin 11Add
BLAST
Repeati545 – 56016Xin 12Add
BLAST
Repeati589 – 60416Xin 13Add
BLAST
Repeati621 – 63616Xin 14Add
BLAST
Repeati654 – 66916Xin 15Add
BLAST
Repeati691 – 70616Xin 16Add
BLAST
Repeati723 – 73816Xin 17Add
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni1 – 5454Interaction with VASPAdd
BLAST
Regioni531 – 632102Interaction with CTNNB1By similarityAdd
BLAST
Regioni1685 – 1843159Interaction with FLNCAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili1462 – 149029Sequence AnalysisAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi23 – 286Poly-Pro
Compositional biasi343 – 3464Poly-Gln
Compositional biasi1247 – 1350104Pro-richAdd
BLAST

Domaini

Xin repeats bind F-actin.

Sequence similaritiesi

Belongs to the Xin family.PROSITE-ProRule annotation
Contains 17 Xin repeats.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil, Repeat

Phylogenomic databases

eggNOGiNOG85108.
GeneTreeiENSGT00530000063779.
HOVERGENiHBG106912.
InParanoidiQ702N8.
OMAiDGIYTAH.
OrthoDBiEOG72C4ZN.
PhylomeDBiQ702N8.
TreeFamiTF330745.

Family and domain databases

InterProiIPR012510. Actin-binding_Xin_repeat.
IPR030072. XIRP1/XIRP2.
[Graphical view]
PANTHERiPTHR22591. PTHR22591. 1 hit.
PfamiPF08043. Xin. 8 hits.
[Graphical view]
PROSITEiPS51389. XIN. 17 hits.
[Graphical view]

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform A (identifier: Q702N8-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MADTQTQVAP TPTMRMATAE DLPLPPPPAL EDLPLPPPKE SFSKFHQQRQ
60 70 80 90 100
ASELRRLYRH IHPELRKNLA EAVAEDLAEV LGSEEPTEGD VQCMRWIFEN
110 120 130 140 150
WRLDAIGEHE RPAAKEPVLC GDVQATSRKF EEGSFANSTD QEPTRPQPGG
160 170 180 190 200
GDVRAARWLF ETKPLDELTG QAKELEATVR EPAASGDVQG TRMLFETRPL
210 220 230 240 250
DRLGSRPSLQ EQSPLELRSE IQELKGDVKK TVKLFQTEPL CAIQDAEGAI
260 270 280 290 300
HEVKAACREE IQSNAVRSAR WLFETRPLDA INQDPSQVRV IRGISLEEGA
310 320 330 340 350
RPDVSATRWI FETQPLDAIR EILVDEKDFQ PSPDLIPPGP DVQQQQHLFE
360 370 380 390 400
TRALDTLKGD EEAGAEAPPK EEVVPGDVRS TLWLFETKPL DAFRDKVQVG
410 420 430 440 450
HLQRVDPQDG EGHLSSDSSS ALPFSQSAPQ RDELKGDVKT FKNLFETLPL
460 470 480 490 500
DSIGQGEVLA HGSPSREEGT DSAGQAQGIG SPVYAMQDSK GRLHALTSVS
510 520 530 540 550
REQIVGGDVQ GYRWMFETQP LDQLGRSPST IDVVRGITRQ EVVAGDVGTA
560 570 580 590 600
RWLFETQPLE MIHQREQQER QKEEGKSQGD PQPEAPPKGD VQTIRWLFET
610 620 630 640 650
CPMSELAEKQ GSEVTDPTAK AEAQSCTWMF KPQPVDRPVG SREQHLQVSQ
660 670 680 690 700
VPAGERQTDR HVFETEPLQA SGRPCGRRPV RYCSRVEIPS GQVSRQKEVF
710 720 730 740 750
QALEAGKKEE QEPRVIAGSI PAGSVHKFTW LFENCPMGSL AAESIQGGNL
760 770 780 790 800
LEEQPMSPSG NRMQESQETA AEGTLRTLHA TPGILHHGGI LMEARGPGEL
810 820 830 840 850
CLAKYVLSGT GQGHPYIRKE ELVSGELPRI ICQVLRRPDV DQQGLLVQED
860 870 880 890 900
PTGQLQLKPL RLPTPGSSGN IEDMDPELQQ LLACGLGTSV ARTGLVMQET
910 920 930 940 950
EQGLVALTAY SLQPRLTSKA SERSSVQLLA SCIDKGDLSG LHSLRWEPPA
960 970 980 990 1000
DPSPVPASEG AQSLHPTESI IHVPPLDPSM GMGHLRASGA TPCPPQAIGK
1010 1020 1030 1040 1050
AVPLAGEAAA PAQLQNTEKQ EDSHSGQKGM AVLGKSEGAT TTPPGPGAPD
1060 1070 1080 1090 1100
LLAAMQSLRM ATAEAQSLHQ QVLNKHKQGP TPTATSNPIQ DGLRKAGATQ
1110 1120 1130 1140 1150
SNIRPGGGSD PRIPAAPRKV SREEQALPRG LPGGWVTIQD GIYTAHPVRT
1160 1170 1180 1190 1200
FDPPGGVQLS QREPQSRHRE TALSVQAPRP LQGGPGQSTG PGREEPGGCT
1210 1220 1230 1240 1250
QMAWGPPGKA MAEVCPGGLQ AAETTLKTAP LGRHILASGP QAAGASPHPH
1260 1270 1280 1290 1300
NAFVPPPPTL PAAVTGPDFP AGAHRAEDSI QQASEPLKDP LLHSHSSPAG
1310 1320 1330 1340 1350
QRTPGGSQTK TPKLDPTMPP KKKPQLPPKP AHLTQSHPPQ RLPKPLPLSP
1360 1370 1380 1390 1400
SFSSEVGQRE HQRGERDTAI PQPAKVPTTV DQGHIPLARC PSGHSQPSLQ
1410 1420 1430 1440 1450
HGLSTTAPRP TKNQATGSNA QSSEPPKLNA LNHDPTSPQW GPGPSGEQPM
1460 1470 1480 1490 1500
EGSHQGAPES PDSLQRNQKE LQGLLNQVQA LEKEAASSVD VQALRRLFEA
1510 1520 1530 1540 1550
VPQLGGAAPQ APAAHQKPEA SVEQAFGELT RVSTEVAQLK EQTLARLLDI
1560 1570 1580 1590 1600
EEAVHKALSS MSSLQPEASA RGHFQGPPKD HSAHKISVTV SSSARPSGSG
1610 1620 1630 1640 1650
QEVGGQTAVK NQAKVECHTE AQSQVKIRNH TEARGHTAST APSTRRQETS
1660 1670 1680 1690 1700
REYLCPPRVL PSSRDSPSSP TFISIQSATR KPLETPSFKG NPDVSVKSTQ
1710 1720 1730 1740 1750
LAQDIGQALL HQKGVQDKTG KKDITQCSVQ PEPAPPSASP LPRGWQKSVL
1760 1770 1780 1790 1800
ELQTGPGSSQ HYGAMRTVTE QYEEVDQFGN TVLMSSTTVT EQAEPPRNPG
1810 1820 1830 1840
SHLGLHASPL LRQFLHSPAG FSSDLTEAET VQVSCSYSQP AAQ
Length:1,843
Mass (Da):198,561
Last modified:July 5, 2004 - v1
Checksum:i41A5CC13FE1955CB
GO
Isoform B (identifier: Q702N8-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1120-1121: VS → LL
     1122-1843: Missing.

Show »
Length:1,121
Mass (Da):122,134
Checksum:i6BC1414DF33DE804
GO
Isoform C (identifier: Q702N8-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1317: Missing.

Show »
Length:526
Mass (Da):56,273
Checksum:i79911F6ED688EBE6
GO

Sequence cautioni

The sequence BAC86519.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence CAC81057.1 differs from that shown. Reason: Frameshift at position 1594. Curated
The sequence CAD28459.1 differs from that shown. Reason: Erroneous initiation. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti21 – 211D → G in CAH18268 (PubMed:17974005).Curated
Sequence conflicti106 – 1061I → T in CAH18268 (PubMed:17974005).Curated
Sequence conflicti274 – 2741E → G in CAH18268 (PubMed:17974005).Curated
Sequence conflicti754 – 7541Q → P in CAH18268 (PubMed:17974005).Curated
Sequence conflicti813 – 8131G → R in CAH18268 (PubMed:17974005).Curated
Sequence conflicti1556 – 15561K → R in BAC04783 (PubMed:14702039).Curated

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti3 – 31D → N.
Corresponds to variant rs2271488 [ dbSNP | Ensembl ].
VAR_038439
Natural varianti346 – 3461Q → R.1 Publication
Corresponds to variant rs6805248 [ dbSNP | Ensembl ].
VAR_038440
Natural varianti551 – 5511R → Q.
Corresponds to variant rs34121641 [ dbSNP | Ensembl ].
VAR_038441
Natural varianti695 – 6951R → C.
Corresponds to variant rs60540208 [ dbSNP | Ensembl ].
VAR_061722
Natural varianti776 – 7761R → W.
Corresponds to variant rs9823779 [ dbSNP | Ensembl ].
VAR_061723
Natural varianti929 – 9291L → H in a breast cancer sample; somatic mutation. 1 Publication
VAR_038442
Natural varianti965 – 9651H → P.
Corresponds to variant rs11711871 [ dbSNP | Ensembl ].
VAR_038443
Natural varianti1046 – 10461P → A.
Corresponds to variant rs35649793 [ dbSNP | Ensembl ].
VAR_038444
Natural varianti1061 – 10611A → V.
Corresponds to variant rs35795536 [ dbSNP | Ensembl ].
VAR_061724
Natural varianti1604 – 16041G → R.1 Publication
Corresponds to variant rs3732383 [ dbSNP | Ensembl ].
VAR_038445
Natural varianti1608 – 16081A → V.
Corresponds to variant rs34810344 [ dbSNP | Ensembl ].
VAR_038446
Natural varianti1634 – 16341R → K in a breast cancer sample; somatic mutation. 1 Publication
VAR_038447
Natural varianti1707 – 17071Q → H.
Corresponds to variant rs34053674 [ dbSNP | Ensembl ].
VAR_061725
Natural varianti1724 – 17241I → V.
Corresponds to variant rs9827576 [ dbSNP | Ensembl ].
VAR_038448

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 13171317Missing in isoform C. 2 PublicationsVSP_030843Add
BLAST
Alternative sequencei1120 – 11212VS → LL in isoform B. 2 PublicationsVSP_030844
Alternative sequencei1122 – 1843722Missing in isoform B. 2 PublicationsVSP_030845Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ626899 mRNA. Translation: CAF25191.1.
AJ626900 mRNA. Translation: CAF25192.1.
AY375160 mRNA. Translation: AAQ64003.1.
AK095941 mRNA. Translation: BAC04655.1.
AK096421 mRNA. Translation: BAC04783.1.
AK126299 mRNA. Translation: BAC86519.1. Different initiation.
AL713648 mRNA. Translation: CAD28459.1. Different initiation.
CR749430 mRNA. Translation: CAH18268.1.
BC127119 mRNA. Translation: AAI27120.1.
BC139782 mRNA. Translation: AAI39783.1.
AJ271461 mRNA. Translation: CAC81057.1. Frameshift.
CCDSiCCDS2683.1. [Q702N8-1]
CCDS56245.1. [Q702N8-2]
RefSeqiNP_001185550.1. NM_001198621.2. [Q702N8-2]
NP_919269.2. NM_194293.2. [Q702N8-1]
XP_005264966.1. XM_005264909.2. [Q702N8-1]
UniGeneiHs.447868.
Hs.737550.

Genome annotation databases

EnsembliENST00000340369; ENSP00000343140; ENSG00000168334. [Q702N8-1]
ENST00000396251; ENSP00000379550; ENSG00000168334. [Q702N8-2]
ENST00000421646; ENSP00000391645; ENSG00000168334. [Q702N8-3]
GeneIDi165904.
KEGGihsa:165904.
UCSCiuc003cji.3. human. [Q702N8-2]
uc003cjj.3. human. [Q702N8-3]
uc003cjk.2. human. [Q702N8-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ626899 mRNA. Translation: CAF25191.1.
AJ626900 mRNA. Translation: CAF25192.1.
AY375160 mRNA. Translation: AAQ64003.1.
AK095941 mRNA. Translation: BAC04655.1.
AK096421 mRNA. Translation: BAC04783.1.
AK126299 mRNA. Translation: BAC86519.1. Different initiation.
AL713648 mRNA. Translation: CAD28459.1. Different initiation.
CR749430 mRNA. Translation: CAH18268.1.
BC127119 mRNA. Translation: AAI27120.1.
BC139782 mRNA. Translation: AAI39783.1.
AJ271461 mRNA. Translation: CAC81057.1. Frameshift.
CCDSiCCDS2683.1. [Q702N8-1]
CCDS56245.1. [Q702N8-2]
RefSeqiNP_001185550.1. NM_001198621.2. [Q702N8-2]
NP_919269.2. NM_194293.2. [Q702N8-1]
XP_005264966.1. XM_005264909.2. [Q702N8-1]
UniGeneiHs.447868.
Hs.737550.

3D structure databases

ProteinModelPortaliQ702N8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi127921. 7 interactions.
IntActiQ702N8. 5 interactions.
MINTiMINT-8330054.

PTM databases

PhosphoSiteiQ702N8.

Polymorphism and mutation databases

BioMutaiXIRP1.
DMDMi74712579.

Proteomic databases

PaxDbiQ702N8.
PRIDEiQ702N8.

Protocols and materials databases

DNASUi165904.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000340369; ENSP00000343140; ENSG00000168334. [Q702N8-1]
ENST00000396251; ENSP00000379550; ENSG00000168334. [Q702N8-2]
ENST00000421646; ENSP00000391645; ENSG00000168334. [Q702N8-3]
GeneIDi165904.
KEGGihsa:165904.
UCSCiuc003cji.3. human. [Q702N8-2]
uc003cjj.3. human. [Q702N8-3]
uc003cjk.2. human. [Q702N8-1]

Organism-specific databases

CTDi165904.
GeneCardsiGC03M039200.
H-InvDBHIX0003187.
HGNCiHGNC:14301. XIRP1.
HPAiCAB026391.
HPA016750.
HPA018458.
MIMi609777. gene.
neXtProtiNX_Q702N8.
PharmGKBiPA162409336.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG85108.
GeneTreeiENSGT00530000063779.
HOVERGENiHBG106912.
InParanoidiQ702N8.
OMAiDGIYTAH.
OrthoDBiEOG72C4ZN.
PhylomeDBiQ702N8.
TreeFamiTF330745.

Miscellaneous databases

ChiTaRSiXIRP1. human.
GenomeRNAii165904.
NextBioi88568.
PROiQ702N8.
SOURCEiSearch...

Gene expression databases

BgeeiQ702N8.
GenevisibleiQ702N8. HS.

Family and domain databases

InterProiIPR012510. Actin-binding_Xin_repeat.
IPR030072. XIRP1/XIRP2.
[Graphical view]
PANTHERiPTHR22591. PTHR22591. 1 hit.
PfamiPF08043. Xin. 8 hits.
[Graphical view]
PROSITEiPS51389. XIN. 17 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM B), FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH F-ACTIN.
    Tissue: Skeletal muscle.
  2. "Unusual splicing events result in distinct Xin isoforms that associate differentially with filamin c and Mena/VASP."
    van der Ven P.F.M., Ehler E., Vakeel P., Eulitz S., Schenk J.A., Milting H., Micheel B., Fuerst D.O.
    Exp. Cell Res. 312:2154-2167(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM A), ALTERNATIVE SPLICING (ISOFORMS B AND C), TISSUE SPECIFICITY, INTERACTION WITH FLNC AND VASP.
    Tissue: Skeletal muscle.
  3. "A novel human gene, hXin, specifically expressed in human heart and skeletal muscle."
    Luo J., Liu M., Wu X.
    Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM A).
  4. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM C), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 444-1843 (ISOFORM A).
    Tissue: Heart, Tongue and Trachea.
  5. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM B), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 570-1623 (ISOFORM A), VARIANT ARG-346.
    Tissue: Liver and Skeletal muscle.
  6. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM C), VARIANT ARG-1604.
  7. "Study of a muscle specific transcript."
    Trevisan S., Lanfranchi G.
    Submitted (JAN-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1554-1843.
  8. Cited for: VARIANTS [LARGE SCALE ANALYSIS] HIS-929 AND LYS-1634.

Entry informationi

Entry nameiXIRP1_HUMAN
AccessioniPrimary (citable) accession number: Q702N8
Secondary accession number(s): A0JP25
, A4QPE2, Q68DF2, Q6ZTR3, Q702N9, Q8IVN7, Q8N1N3, Q8N904, Q8TCG7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: July 5, 2004
Last modified: June 24, 2015
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Miscellaneous

'Xin' means 'heart' in Chinese.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 3
    Human chromosome 3: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.