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Q700B8 (Q700B8_SERMA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=3.2.1.14 EMBL CAF74787.1
Gene names
Name:chiC1 EMBL CAF74787.1
OrganismSerratia marcescens EMBL CAF74787.1
Taxonomic identifier615 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia

Protein attributes

Sequence length480 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Contains 1 fibronectin type-III domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding151Calcium; via carbonyl oxygen PDB 4AXN
Metal binding171Calcium; via carbonyl oxygen PDB 4AXN
Metal binding931Calcium PDB 4AXN
Metal binding1321Calcium; via carbonyl oxygen PDB 4AXN
Metal binding1341Calcium PDB 4AXN
Binding site301Acetate 1 PDB 4AXN
Binding site1391Acetate 1 PDB 4AXN
Binding site2081Acetate 1 PDB 4AXN
Binding site2861Acetate 3 PDB 4AXN
Binding site3001Acetate 2 PDB 4AXN
Binding site3041Acetate 2 PDB 4AXN

Sequences

Sequence LengthMass (Da)Tools
Q700B8 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: DC7749619E52A6CB

FASTA48051,766
        10         20         30         40         50         60 
MSTNNTINAV AADDAAIMPS IANKKILMGF WHNWAAGASD GYQQGQFANM NLTDIPTEYN 

        70         80         90        100        110        120 
VVAVAFMKGQ GIPTFKPYNL SDTEFRRQVG VLNSQGRAVL ISLGGADAHI ELKTGDEDKL 

       130        140        150        160        170        180 
KDEIIRLVEV YGFDGLDIDL EQAAIGAANN KTVLPAALKK VKDHYAAQGK NFIISMAPEF 

       190        200        210        220        230        240 
PYLRTNGTYL DYINALEGYY DFIAPQYYNQ GGDGIWVDEL NAWITQNNDA MKEDFLYYLT 

       250        260        270        280        290        300 
ESLVTGTRGY AKIPAAKFVI GLPSNNDAAA TGYVVNKQAV YNAFSRLDAK NLSIKGLMTW 

       310        320        330        340        350        360 
SINWDNGKSK AGVAYNWEFK TRYAPLIQGG VTPPPGKPNA PTALTVAELG ATSLKLSWAA 

       370        380        390        400        410        420 
ATGAFPIASY TVYRNGNPIG QTAGLSLADG GLTPATQYSY FVTATDSQGN TSLPSSALAV 

       430        440        450        460        470        480 
KTANDGTPPD PGAPEWQNNH SYKAGDVVSY KGKKYTCIQA HTSNAGWTPD AAFTLWQLIA 

« Hide

References

[1]"The non-catalytic chitin-binding protein CBP21 from Serratia marcescens is essential for chitin degradation."
Vaaje-Kolstad G., Horn S.J., van Aalten D.M., Synstad B., Eijsink V.G.
J. Biol. Chem. 280:28492-28497(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BJL 200 EMBL CAF74787.1.
[2]"Hallmarks of processivity in glycoside hydrolases from crystallographic and computational studies of the Serratia marcescens chitinases."
Payne C.M., Baban J., Horn S.J., Backe P.H., Arvai A.S., Dalhus B., Bjoras M., Eijsink V.G., Sorlie M., Beckham G.T., Vaaje-Kolstad G.
J. Biol. Chem. 287:36322-36330(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.68 ANGSTROMS) OF 1-328 IN COMPLEX WITH ACETATE AND CALCIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ630582 Genomic DNA. Translation: CAF74787.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4AXNX-ray1.68A/B1-328[»]
ProteinModelPortalQ700B8.
SMRQ700B8. Positions 435-478.
ModBaseSearch...
MobiDBSearch...

Chemistry

ChEMBLCHEMBL5181.

Protein family/group databases

CAZyCBM12. Carbohydrate-Binding Module Family 12.
GH18. Glycoside Hydrolase Family 18.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.10.10.20. 1 hit.
2.60.40.10. 1 hit.
3.20.20.80. 1 hit.
InterProIPR003610. CBM_fam5/12.
IPR003961. Fibronectin_type3.
IPR001223. Glyco_hydro18cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PfamPF02839. CBM_5_12. 1 hit.
PF00041. fn3. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
SMARTSM00495. ChtBD3. 1 hit.
SM00060. FN3. 1 hit.
[Graphical view]
SUPFAMSSF49265. SSF49265. 1 hit.
SSF51055. SSF51055. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS01095. CHITINASE_18. 1 hit.
PS50853. FN3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ700B8_SERMA
AccessionPrimary (citable) accession number: Q700B8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)