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Q6ZZF4

- GPD1_CYBJA

UniProt

Q6ZZF4 - GPD1_CYBJA

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Protein
Glycerol-3-phosphate dehydrogenase [NAD(+)] 1
Gene
gpd1
Organism
Cyberlindnera jadinii (Torula yeast) (Pichia jadinii)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei133 – 1331NAD By similarity
Binding sitei157 – 1571NAD; via amide nitrogen By similarity
Binding sitei157 – 1571Substrate By similarity
Binding sitei190 – 1901NAD; via amide nitrogen By similarity
Active sitei250 – 2501Proton acceptor By similarity
Binding sitei316 – 3161NAD By similarity
Binding sitei345 – 3451NAD By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi45 – 506NAD By similarity

GO - Molecular functioni

  1. NAD binding Source: InterPro
  2. glycerol-3-phosphate dehydrogenase [NAD+] activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. glycerol-3-phosphate catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

NAD

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenase [NAD(+)] 1 (EC:1.1.1.8)
Gene namesi
Name:gpd1
OrganismiCyberlindnera jadinii (Torula yeast) (Pichia jadinii)
Taxonomic identifieri4903 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesPhaffomycetaceaeCyberlindnera

Subcellular locationi

GO - Cellular componenti

  1. glycerol-3-phosphate dehydrogenase complex Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 393393Glycerol-3-phosphate dehydrogenase [NAD(+)] 1
PRO_0000138093Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ6ZZF4.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni316 – 3172Substrate binding By similarity

Sequence similaritiesi

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERiPTHR11728. PTHR11728. 1 hit.
PfamiPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSiPR00077. GPDHDRGNASE.
SUPFAMiSSF48179. SSF48179. 1 hit.
TIGRFAMsiTIGR03376. glycerol3P_DH. 1 hit.
PROSITEiPS00957. NAD_G3PDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6ZZF4-1 [UniParc]FASTAAdd to Basket

« Hide

MLRIGKLNLS TMSSAQQRLA QVGSHLTAQK QSLAPQRPYK ITVIGSGNWG    50
TTIAKVLAEN AGLRPHLFQH QVDMWVFEEK INGVNLTEII NTQHENVKYL 100
PGIKLPKNLH AEPSIVKAAE GADLLVFNIP HQFLPGICKQ LSKATLKPHV 150
RAISCLKGLE VTPNGCKLLS TYITEHLGVH CGALSGANLA PEVAKEKWSE 200
TTVAYRLPND FQGHGKDIDR YVLRAAFHRP YFHVRVIEDV AGVSLAGALK 250
NVVALGVGFV HGLNWGDNAA SAIQRFGLNE TIKFAEVFFP GETNQDTFTK 300
ESAGVADLIT TCSGGRNVRV AKAMAITGKS AVEVERELLN GQSAQGIITS 350
KEVHELLAAK NLTKEFPLFE AIYQIVYGTE SIERLPELIE EDE 393
Length:393
Mass (Da):42,957
Last modified:July 5, 2004 - v1
Checksum:iA87107CBB8B605D9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ632339 Genomic DNA. Translation: CAG15347.1.
AJ632341 Genomic DNA. Translation: CAG15350.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ632339 Genomic DNA. Translation: CAG15347.1 .
AJ632341 Genomic DNA. Translation: CAG15350.1 .

3D structure databases

ProteinModelPortali Q6ZZF4.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProi IPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view ]
PANTHERi PTHR11728. PTHR11728. 1 hit.
Pfami PF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSi PR00077. GPDHDRGNASE.
SUPFAMi SSF48179. SSF48179. 1 hit.
TIGRFAMsi TIGR03376. glycerol3P_DH. 1 hit.
PROSITEi PS00957. NAD_G3PDH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Identification of the genes GPD1 and GPD2 of Pichia jadinii."
    Ostermann K., Richter M., Zscharnack M., Rothe R., Walther T., Roedel G.
    DNA Seq. 17:452-457(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 9950 / CBS 5609 / DSM 2361 / NBRC 0998 / NRRL Y-900.

Entry informationi

Entry nameiGPD1_CYBJA
AccessioniPrimary (citable) accession number: Q6ZZF4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: July 5, 2004
Last modified: October 16, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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