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Q6ZZF4 (GPD1_CYBJA) Reviewed, UniProtKB/Swiss-Prot

Last modified March 6, 2013. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycerol-3-phosphate dehydrogenase [NAD(+)] 1
EC=1.1.1.8
Gene names
Name:gpd1
OrganismCyberlindnera jadinii (Torula yeast) (Pichia jadinii)
Taxonomic identifier4903 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Phaffomycetaceae › Cyberlindnera

Protein attributes

Sequence length393 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH.

Sequence similarities

Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 393393Glycerol-3-phosphate dehydrogenase [NAD(+)] 1
PRO_0000138093

Regions

Nucleotide binding45 – 506NAD By similarity
Region316 – 3172Substrate binding By similarity

Sites

Active site2501Proton acceptor By similarity
Binding site1331NAD By similarity
Binding site1571NAD; via amide nitrogen By similarity
Binding site1571Substrate By similarity
Binding site1901NAD; via amide nitrogen By similarity
Binding site3161NAD By similarity
Binding site3451NAD By similarity

Sequences

Sequence LengthMass (Da)Tools
Q6ZZF4 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: A87107CBB8B605D9

FASTA39342,957
        10         20         30         40         50         60 
MLRIGKLNLS TMSSAQQRLA QVGSHLTAQK QSLAPQRPYK ITVIGSGNWG TTIAKVLAEN 

        70         80         90        100        110        120 
AGLRPHLFQH QVDMWVFEEK INGVNLTEII NTQHENVKYL PGIKLPKNLH AEPSIVKAAE 

       130        140        150        160        170        180 
GADLLVFNIP HQFLPGICKQ LSKATLKPHV RAISCLKGLE VTPNGCKLLS TYITEHLGVH 

       190        200        210        220        230        240 
CGALSGANLA PEVAKEKWSE TTVAYRLPND FQGHGKDIDR YVLRAAFHRP YFHVRVIEDV 

       250        260        270        280        290        300 
AGVSLAGALK NVVALGVGFV HGLNWGDNAA SAIQRFGLNE TIKFAEVFFP GETNQDTFTK 

       310        320        330        340        350        360 
ESAGVADLIT TCSGGRNVRV AKAMAITGKS AVEVERELLN GQSAQGIITS KEVHELLAAK 

       370        380        390 
NLTKEFPLFE AIYQIVYGTE SIERLPELIE EDE

« Hide

References

[1]"Identification of the genes GPD1 and GPD2 of Pichia jadinii."
Ostermann K., Richter M., Zscharnack M., Rothe R., Walther T., Roedel G.
DNA Seq. 17:452-457(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 9950 / CBS 5609 / DSM 2361 / NBRC 0998 / NRRL Y-900.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AJ632339 Genomic DNA. Translation: CAG15347.1.
AJ632341 Genomic DNA. Translation: CAG15350.1.

3D structure databases

ProteinModelPortalQ6ZZF4.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11728. PTHR11728. 1 hit.
PfamPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSPR00077. GPDHDRGNASE.
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
TIGRFAMsTIGR03376. glycerol3P_DH. 1 hit.
PROSITEPS00957. NAD_G3PDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGPD1_CYBJA
AccessionPrimary (citable) accession number: Q6ZZF4
Entry history
Integrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: July 5, 2004
Last modified: March 6, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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