Q6ZVN8 (RGMC_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 88.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Hemojuvelin Alternative name(s): Hemochromatosis type 2 protein RGM domain family member C | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 426 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Member of the repulsive guidance molecule (RGM) family. Involved in iron metabolism. Acts as a bone morphogenetic protein (BMP) coreceptor By similarity. Enhancement of BMP signaling regulates hepcidin (HAMP) expression and iron metabolism By similarity. May cooperate with hepcidin to restrict iron absorption in the gut. Could represent the cellular receptor for hepcidin. |
| Subunit structure | Interacts with BMP2 and BMP4 By similarity. Interacts with BMPR1B. Interacts with TMPRSS6. Ref.7 Ref.8 |
| Subcellular location | Cell membrane; Lipid-anchor › GPI-anchor By similarity. |
| Tissue specificity | Adult and fetal liver, heart, and skeletal muscle. Ref.1 |
| Involvement in disease | Hemochromatosis 2A (HFE2A) [MIM:602390]: A juvenile form of hemochromatosis, a disorder of iron metabolism with excess deposition of iron in a variety of organs leading to their failure, bronze skin pigmentation, hepatic cirrhosis, arthropathy and diabetes. The most common symptoms of juvenile hemochromatosis at presentation are hypogonadism and cardiomyopathy. |
| Sequence similarities | Belongs to the repulsive guidance molecule (RGM) family. |
Ontologies
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform a (identifier: Q6ZVN8-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform b (identifier: Q6ZVN8-2) The sequence of this isoform differs from the canonical sequence as follows: 1-113: Missing. | ||||||
| Isoform c (identifier: Q6ZVN8-3) The sequence of this isoform differs from the canonical sequence as follows: 1-226: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 35 | 35 | Potential | ||||||
| Chain | 36 – 400 | 365 | Hemojuvelin | PRO_0000030398 | |||||
| Propeptide | 401 – 426 | 26 | Removed in mature form Potential | PRO_0000030399 | |||||
Regions | |||||||||
| Compositional bias | 64 – 78 | 15 | Poly-Gly | ||||||
| Compositional bias | 127 – 130 | 4 | Poly-Pro | ||||||
Amino acid modifications | |||||||||
| Lipidation | 400 | 1 | GPI-anchor amidated aspartate Potential | ||||||
| Glycosylation | 118 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 213 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 372 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 226 | 226 | Missing in isoform c. | VSP_011320 | |||||
| Alternative sequence | 1 – 113 | 113 | Missing in isoform b. | VSP_011319 | |||||
| Natural variant | 80 | 1 | C → R in HFE2A. Ref.10 Corresponds to variant rs28940586 [ dbSNP | Ensembl ]. | VAR_019617 | |||||
| Natural variant | 85 | 1 | S → P in HFE2A. Ref.9 | VAR_019618 | |||||
| Natural variant | 99 | 1 | G → R in HFE2A. Ref.9 | VAR_019619 | |||||
| Natural variant | 101 | 1 | L → P in HFE2A. Ref.10 | VAR_019620 | |||||
| Natural variant | 168 | 1 | A → D in HFE2A. Ref.9 | VAR_019621 | |||||
| Natural variant | 170 | 1 | F → S in HFE2A. Ref.9 | VAR_019622 | |||||
| Natural variant | 172 | 1 | D → E in HFE2A. Ref.9 | VAR_019623 | |||||
| Natural variant | 191 | 1 | W → C in HFE2A. Ref.9 | VAR_019624 | |||||
| Natural variant | 205 | 1 | S → R in HFE2A. Ref.9 | VAR_019625 | |||||
| Natural variant | 222 | 1 | I → N in HFE2A. Ref.1 Ref.10 | VAR_019626 | |||||
| Natural variant | 250 | 1 | G → V in HFE2A. Ref.9 | VAR_019627 | |||||
| Natural variant | 288 | 1 | R → W in HFE2A. Ref.9 | VAR_019628 | |||||
| Natural variant | 310 | 1 | A → G. Corresponds to variant rs7540883 [ dbSNP | Ensembl ]. | VAR_053636 | |||||
| Natural variant | 320 | 1 | G → V in HFE2A. Ref.1 Ref.9 Ref.10 Ref.11 | VAR_019629 | |||||
| Natural variant | 321 | 1 | C → W in HFE2A. Ref.11 | VAR_019927 | |||||
Experimental info | |||||||||
| Sequence conflict | 69 | 1 | G → GG in ABC40718. Ref.3 | ||||||
| Sequence conflict | 299 | 1 | K → E in BAC03944. Ref.2 | ||||||
Sequences
| ||||||||||||||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Mutations in HFE2 cause iron overload in chromosome 1q-linked juvenile hemochromatosis." Papanikolaou G., Samuels M.E., Ludwig E.H., MacDonald M.L.E., Franchini P.L., Dube M.-P., Andres L., MacFarlane J., Sakellaropoulos N., Politou M., Nemeth E., Thompson J., Risler J.K., Zaborowska C., Babakaiff R., Radomski C.C., Pape T.D., Davidas O. Goldberg Y.P.Nat. Genet. 36:77-82(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM A), ALTERNATIVE SPLICING, TISSUE SPECIFICITY, VARIANTS HFE2A ASN-222 AND VAL-320. Tissue: Liver. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS A AND B). Tissue: Liver and Skeletal muscle. |
| [3] | NIEHS SNPs program Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [4] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS B AND C). Tissue: PNS and Skeletal muscle. |
| [7] | "Bone morphogenetic protein signaling by hemojuvelin regulates hepcidin expression." Babitt J.L., Huang F.W., Wrighting D.M., Xia Y., Sidis Y., Samad T.A., Campagna J.A., Chung R.T., Schneyer A.L., Woolf C.J., Andrews N.C., Lin H.Y. Nat. Genet. 38:531-539(2006) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH BMPR1B. |
| [8] | "Molecular mechanisms of the defective hepcidin inhibition in TMPRSS6 mutations associated with iron-refractory iron deficiency anemia." Silvestri L., Guillem F., Pagani A., Nai A., Oudin C., Silva M., Toutain F., Kannengiesser C., Beaumont C., Camaschella C., Grandchamp B. Blood 113:5605-5608(2009) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH TMPRSS6. |
| [9] | "Spectrum of hemojuvelin gene mutations in 1q-linked juvenile hemochromatosis." Lanzara C., Roetto A., Daraio F., Rivard S., Ficarella R., Simard H., Cox T.M., Cazzola M., Piperno A., Gimenez-Roqueplo A.P., Grammatico P., Volinia S., Gasparini P., Camaschella C. Blood 103:4317-4321(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HFE2A PRO-85; ARG-99; ASP-168; SER-170; GLU-172; CYS-191; ARG-205; VAL-250; TRP-288 AND VAL-320. |
| [10] | "Genetic abnormalities and juvenile hemochromatosis: mutations of the HJV gene encoding hemojuvelin." Lee P.L., Beutler E., Rao S.V., Barton J.C. Blood 103:4669-4671(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HFE2A ARG-80; PRO-101; ASN-222 AND VAL-320. |
| [11] | "Hemojuvelin (HJV) mutations in persons of European, African-American and Asian ancestry with adult onset haemochromatosis." Lee P.L., Barton J.C., Brandhagen D., Beutler E. Br. J. Haematol. 127:224-229(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS HFE2A VAL-320 AND TRP-321. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AY372521 mRNA. Translation: AAR22390.1. AK092682 mRNA. Translation: BAC03944.1. AK124273 mRNA. Translation: BAC85823.1. AK092692 mRNA. Translation: BAC03947.1. AK096905 mRNA. Translation: BAC04890.1. DQ309445 Genomic DNA. Translation: ABC40718.1. AL355505, AL138842 Genomic DNA. Translation: CAI22091.1. AL138842, AL355505 Genomic DNA. Translation: CAI22349.1. CH471244 Genomic DNA. Translation: EAW71408.1. BC017926 mRNA. Translation: AAH17926.1. BC085604 mRNA. Translation: AAH85604.1. |
| IPI | IPI00329576. IPI00400863. IPI00419814. |
| RefSeq | NP_660320.3. NM_145277.4. NP_973733.1. NM_202004.3. NP_998817.1. NM_213652.3. NP_998818.1. NM_213653.3. XP_003960223.1. XM_003960174.1. XP_003960224.1. XM_003960175.1. XP_003960225.1. XM_003960176.1. |
| UniGene | Hs.632436. |
3D structure databases | |
| ProteinModelPortal | Q6ZVN8. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000337014. |
PTM databases | |
| PhosphoSite | Q6ZVN8. |
Polymorphism databases | |
| DMDM | 51316254. |
Proteomic databases | |
| PaxDb | Q6ZVN8. |
| PRIDE | Q6ZVN8. |
Protocols and materials databases | |
| DNASU | 148738. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000336751; ENSP00000337014; ENSG00000168509. ENST00000357836; ENSP00000350495; ENSG00000168509. ENST00000475797; ENSP00000425716; ENSG00000168509. ENST00000497365; ENSP00000421820; ENSG00000168509. ENST00000577520; ENSP00000463276; ENSG00000265970. ENST00000579423; ENSP00000464212; ENSG00000265970. ENST00000580693; ENSP00000464413; ENSG00000265970. ENST00000580823; ENSP00000462699; ENSG00000265970. |
| GeneID | 101060525. 148738. |
| KEGG | hsa:101060525. hsa:148738. |
| UCSC | uc001eni.2. human. uc001enj.2. human. |
Organism-specific databases | |
| CTD | 148738. |
| GeneCards | GC01P145413. |
| HGNC | HGNC:4887. HFE2. |
| HPA | HPA014472. |
| MIM | 602390. phenotype. 608374. gene. |
| neXtProt | NX_Q6ZVN8. |
| Orphanet | 79230. Hemochromatosis type 2. |
| PharmGKB | PA29264. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG87951. |
| HOGENOM | HOG000013072. |
| HOVERGEN | HBG057627. |
| InParanoid | Q6ZVN8. |
| KO | K06847. |
| OMA | PPGFLHC. |
| PhylomeDB | Q6ZVN8. |
Enzyme and pathway databases | |
| Pathway_Interaction_DB | bmppathway. BMP receptor signaling. |
| Reactome | REACT_111045. Developmental Biology. |
Gene expression databases | |
| ArrayExpress | Q6ZVN8. |
| Bgee | Q6ZVN8. |
| CleanEx | HS_HFE2. |
| Genevestigator | Q6ZVN8. |
| GermOnline | ENSG00000168509. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR009496. RGM_C. IPR010536. RGM_N. [Graphical view] |
| Pfam | PF06534. RGM_C. 1 hit. PF06535. RGM_N. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 85978. |
| SOURCE | Search... |
Entry information
| Entry name | RGMC_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q6ZVN8 Secondary accession number(s): B1ALI7 Q8WVJ5 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
