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Protein

Putative spermatogenesis-associated protein 31D4

Gene

SPATA31D4

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

May play a role in spermatogenesis.By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Differentiation, Spermatogenesis

Names & Taxonomyi

Protein namesi
Recommended name:
Putative spermatogenesis-associated protein 31D4
Alternative name(s):
Protein FAM75D4
Gene namesi
Name:SPATA31D4
Synonyms:FAM75D4
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:38601. SPATA31D4.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei29 – 4921HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Polymorphism and mutation databases

BioMutaiSPATA31D4.
DMDMi74711931.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 917917Putative spermatogenesis-associated protein 31D4PRO_0000332289Add
BLAST

Proteomic databases

PRIDEiQ6ZUB0.

PTM databases

PhosphoSiteiQ6ZUB0.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi187 – 24761Pro-richAdd
BLAST
Compositional biasi542 – 59251Pro-richAdd
BLAST

Sequence similaritiesi

Belongs to the SPATA31 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000155575.
HOVERGENiHBG097810.
InParanoidiQ6ZUB0.

Family and domain databases

InterProiIPR027970. DUF4599.
[Graphical view]
PfamiPF15371. DUF4599. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6ZUB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENILCFLNS YTETVLSPDS HCLDIDLNFI CLSGLGLFIL YLFYMVLTLY
60 70 80 90 100
SSPTEKNNDT QKHQGRARRK RKSVTFKDRK SLQKEAEEER KLHSFLKSFG
110 120 130 140 150
PPVSCSPLGQ HHDTTLFRRL LCPDPVCRVC NRATADIQRL LSWESLKDAA
160 170 180 190 200
PSVSPLASSA SGAESSFTLA STPSATTPED LILSSRPKPS PPPPLILSPD
210 220 230 240 250
LITTLADLFS PSPLRDPLPP QPVSPLDSKF PIDHSPPQQL PFPLLPPHHI
260 270 280 290 300
ERVEPSLQPE ASLSLNTIFS FGSTLCQDIS QAVNRTDSCA RHHGPPTPSA
310 320 330 340 350
LPPEDCTVTQ SKSNLTVLKT FPEMLSLGGS GGSSTSAPTT KGIDHSCPAS
360 370 380 390 400
SEFSWWQPHA KDSFSSNFVP SDFMEELLTL HSSEASLGGH SVANIIQPVN
410 420 430 440 450
ISFLSHDIPA LLERQVKRRG DFLMWKENGK KPGSFPTQLR PNYQLNSSRN
460 470 480 490 500
MLTSTAVKHD LAESFPFWAS KGKLEWQHIH QQPPYSKCFE DHLEQKYVQL
510 520 530 540 550
FWGLPSLHSE SLHPTVFVQH GRSSMFVFFN GITNTSMSHE SPVLPPPQPL
560 570 580 590 600
FLPSTQPLPL PQTLPRGQSL HLTQVKSLAQ PQSPFPALPP SPLFLIRVCG
610 620 630 640 650
VCFHRPQNEA RSLMPSEINH LEWNVLQKVQ ESVWGLPSVV QKSQEDFCPP
660 670 680 690 700
APNPVLVRKS FKVHVPISII PGDFPLSSEV RKKLEQHIRR RLIQRRWGLP
710 720 730 740 750
RRIHESLSLL RPQNKISELS VSESIHGPLN ISLVEGQRCN VLKKSASSFP
760 770 780 790 800
RSFHERSSNM LSMENVGNYQ GCSQETAPKN HLLHDPETSS EEDLRSNSER
810 820 830 840 850
DLGTHMMHLS GNDSGVRLGQ KQLENALTVH LSKKFEEINE GRMPGTVHSS
860 870 880 890 900
WHSVKQTICL PEKSHSQIKH RNLAALVSED HGVDTSQEMS FLSSNKQKML
910
EAHIKSFHMK PILNLSI
Length:917
Mass (Da):102,390
Last modified:July 5, 2004 - v1
Checksum:i780836436B13DDC3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK125847 mRNA. Translation: BAC86316.1.
RefSeqiNP_001138669.1. NM_001145197.1.
UniGeneiHs.722630.

Genome annotation databases

GeneIDi389761.
KEGGihsa:389761.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK125847 mRNA. Translation: BAC86316.1.
RefSeqiNP_001138669.1. NM_001145197.1.
UniGeneiHs.722630.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiQ6ZUB0.

Polymorphism and mutation databases

BioMutaiSPATA31D4.
DMDMi74711931.

Proteomic databases

PRIDEiQ6ZUB0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi389761.
KEGGihsa:389761.

Organism-specific databases

CTDi389761.
GeneCardsiGC09P084546.
HGNCiHGNC:38601. SPATA31D4.
neXtProtiNX_Q6ZUB0.
GenAtlasiSearch...

Phylogenomic databases

HOGENOMiHOG000155575.
HOVERGENiHBG097810.
InParanoidiQ6ZUB0.

Miscellaneous databases

GenomeRNAii389761.
NextBioi103075.

Family and domain databases

InterProiIPR027970. DUF4599.
[Graphical view]
PfamiPF15371. DUF4599. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.

Entry informationi

Entry nameiS31D4_HUMAN
AccessioniPrimary (citable) accession number: Q6ZUB0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: July 5, 2004
Last modified: June 24, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.