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Protein
Submitted name:

MKIAA0035 protein

Gene

Nolc1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. nucleolus organization Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
MKIAA0035 proteinImported
Gene namesi
Name:Nolc1Imported
Synonyms:mKIAA0035Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1918019. Nolc1.

Subcellular locationi

GO - Cellular componenti

  1. Cajal body Source: MGI
  2. nucleolus Source: MGI
  3. nucleoplasm Source: MGI
  4. small nuclear ribonucleoprotein complex Source: MGI
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ6ZQK6.

PTM databases

PhosphoSiteiQ6ZQK6.

Expressioni

Gene expression databases

GenevestigatoriQ6ZQK6.

Interactioni

Protein-protein interaction databases

MINTiMINT-1854239.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000113823.
HOVERGENiHBG075370.

Family and domain databases

InterProiIPR006594. LisH_dimerisation.
IPR007718. SRP40_C.
[Graphical view]
PfamiPF05022. SRP40_C. 1 hit.
[Graphical view]
SMARTiSM00667. LisH. 1 hit.
[Graphical view]
PROSITEiPS50896. LISH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q6ZQK6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ADTGLRRVVP SDLYPLVLRF LRDSQLSEVA SKFAKATGAT QQDANASSLL
60 70 80 90 100
DIYSFWLNRS TKAPKVKLQS NGPVTKKAKK ETSSSDSSED SSEDEDKKAQ
110 120 130 140 150
GLPTQKAAAQ VKRASVPQHA GKAAAKASES SSSEESSEEE EEDKKKKPVQ
160 170 180 190 200
QKAAKPQAKA VRPPAKKAES SESDSDSDSD SSSEEETPQT QKPKAAVAAK
210 220 230 240 250
AQTKAEAKPG TPAKAQPKVA NGKAAASSSS SSSSSSSDDS EEEKKAAAPP
260 270 280 290 300
KKTVPKKQVV AKAPVKVAAA PTQKSSSSED SSSEEEEGQR QPMKKKAGPY
310 320 330 340 350
SSVPPPSVPL PKKSPGTQAP KKAAAQTQPA DSSDDSSDDS DSSSEEEKKP
360 370 380 390 400
PAKTVVSKTP AKAAPVKKKA ESSSDSSDSD SSEDEAPAKP VSTTKSPKPA
410 420 430 440 450
VTPKPSAAKA VTTPKQPAGS NQKPQSRKAD SSSSEEESSS SEEEEASKKS
460 470 480 490 500
ATTPKAKVTA KAAPAKQAPQ AAGDSSSDSD SSSSEEEEKT PKPPAKKKAA
510 520 530 540 550
GGAVSTPAPG KKAEAESSSS SSSSSEDSSE EEKKKKPKAT TPKIQASKAN
560 570 580 590 600
GTPASLNGKA AKESEEEEEE EETEEKKKAA GTKPGSGKKR KQNETADEAT
610 620 630 640 650
TPQAKKVKLE TPNTFPKRKK GERRASSPFR RVREEEIEVD SRVADNSFDA
660 670 680 690 700
KRGAAGDWGE RANQVLKFTK GKSFRHEKTK KKRGSYRGGS ISVQVNSVKF

DSE
Length:703
Mass (Da):73,742
Last modified:July 5, 2004 - v1
Checksum:i2EBFE96C7248CAD4
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK129040 mRNA. Translation: BAC97850.1.
UniGeneiMm.402190.
Mm.486316.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK129040 mRNA. Translation: BAC97850.1.
UniGeneiMm.402190.
Mm.486316.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-1854239.

PTM databases

PhosphoSiteiQ6ZQK6.

Proteomic databases

PRIDEiQ6ZQK6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1918019. Nolc1.

Phylogenomic databases

HOGENOMiHOG000113823.
HOVERGENiHBG075370.

Miscellaneous databases

ChiTaRSiNolc1. mouse.
SOURCEiSearch...

Gene expression databases

GenevestigatoriQ6ZQK6.

Family and domain databases

InterProiIPR006594. LisH_dimerisation.
IPR007718. SRP40_C.
[Graphical view]
PfamiPF05022. SRP40_C. 1 hit.
[Graphical view]
SMARTiSM00667. LisH. 1 hit.
[Graphical view]
PROSITEiPS50896. LISH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Prediction of the coding sequences of mouse homologues of KIAA gene: III. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
    Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S., Saga Y., Nagase T., Ohara O., Koga H.
    DNA Res. 10:167-180(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Embryonic tailImported.

Entry informationi

Entry nameiQ6ZQK6_MOUSE
AccessioniPrimary (citable) accession number: Q6ZQK6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 26, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.