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Q6ZQD8 (Q6ZQD8_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Sema3e MGI 1340034
Synonyms:mKIAA0331 EMBL BAC97926.1
OrganismMus musculus (Mouse) EMBL BAC97926.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length574 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains Sema domain. SAAS SAAS016201

Ontologies

Keywords
   PTMDisulfide bond SAAS SAAS016201
Gene Ontology (GO)
   Biological_processmulticellular organismal development

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionreceptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAC97926.1

Sequences

Sequence LengthMass (Da)Tools
Q6ZQD8 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 0B1D2FCA818520D1

FASTA57466,551
        10         20         30         40         50         60 
IFRSMGKLGH IRTEHDDERL LKEPKFVGSY MIPDNEDRDD NKMYFFFTEK ALEAENNAHT 

        70         80         90        100        110        120 
IYTRVGRLCV NDMGGQRILV NKWSTFLKAR LVCSVPGMNG IDTYFDELED VFLLPTRDPK 

       130        140        150        160        170        180 
NPVIFGLFNT TSNIFRGHAV CVYHMSSIRE AFNGPYAHKE GPEYHWSLYE GKVPYPRPGS 

       190        200        210        220        230        240 
CASKVNGGKY GTTKDYPDDA IRFARMHPLM YQPIKPVHKK PILVKTDGKY NLRQLAVDRV 

       250        260        270        280        290        300 
EAEDGQYDVL FIGTDTGIVL KVITIYNQET EWMEEVILEE LQIFKDPAPI ISMEISSKRQ 

       310        320        330        340        350        360 
QLYIGSASAV AQVRFHHCDM YGSACADCCL ARDPYCAWDG ISCSRYYPTG AHAKRRFRRQ 

       370        380        390        400        410        420 
DVRHGNAAQQ CFGQQFVGDA LDRTEERLAY GIESNSTLLE CTPRSLQAKV IWFVQKGRDV 

       430        440        450        460        470        480 
RKEEVKTDDR VVKMDLGLLF LRVRKSDAGT YFCQTVEHNF VHTVRKITLE VVEEHKVEGM 

       490        500        510        520        530        540 
FHKDHEEERH HKMPCPPLSG MSQGTKPWYK EFLQLIGYSN FQRVEEYCEK VWCTDKKRKK 

       550        560        570 
LKMSPSKWKY ANPQEKRLRS KAEHFRLPRH TLLS 

« Hide

References

[1]"Prediction of the coding sequences of mouse homologues of KIAA gene: III. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S., Saga Y., Nagase T., Ohara O., Koga H.
DNA Res. 10:167-180(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Embryonic tail EMBL BAC97926.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK129116 mRNA. Translation: BAC97926.1.
UniGeneMm.134093.

3D structure databases

ProteinModelPortalQ6ZQD8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:1340034. Sema3e.

Phylogenomic databases

HOVERGENHBG055071.
InParanoidQ6ZQD8.

Gene expression databases

ArrayExpressQ6ZQD8.
BgeeQ6ZQD8.
GenevestigatorQ6ZQD8.

Family and domain databases

Gene3D2.130.10.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR003599. Ig_sub.
IPR013151. Immunoglobulin.
IPR016201. Plexin-like_fold.
IPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015513. Semaphorin_3E.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PANTHERPTHR11036. PTHR11036. 1 hit.
PTHR11036:SF22. PTHR11036:SF22. 1 hit.
PfamPF00047. ig. 1 hit.
PF01403. Sema. 1 hit.
[Graphical view]
SMARTSM00409. IG. 1 hit.
SM00423. PSI. 1 hit.
SM00630. Sema. 1 hit.
[Graphical view]
SUPFAMSSF101912. SSF101912. 1 hit.
SSF103575. SSF103575. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS51004. SEMA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ6ZQD8_MOUSE
AccessionPrimary (citable) accession number: Q6ZQD8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: March 19, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)